FFCP PHASE1:Hg19::chr17:43307347..43307373,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr17:43307347..43307373,+ | |||
|id=chr17:43307347..43307373,+ | |||
|ontology_enrichment_celltype=CL:0000453!5.51e-31!5;CL:0000990!2.48e-24!8;CL:0000738!3.46e-24!140;CL:0000988!6.88e-23!182;CL:0000451!8.08e-20!10;CL:0000763!1.72e-19!112;CL:0000049!1.72e-19!112;CL:0000037!9.13e-19!172;CL:0000566!9.13e-19!172;CL:0002057!2.47e-18!42;CL:0002032!4.76e-18!165;CL:0000837!4.76e-18!165;CL:0002009!1.46e-17!65;CL:0000080!3.69e-17!6;CL:0000860!5.85e-17!45;CL:0000766!6.94e-17!76;CL:0000557!7.61e-16!71;CL:0001014!1.33e-13!2;CL:0001016!1.33e-13!2;CL:0002031!1.46e-13!124;CL:0002194!2.42e-13!63;CL:0000576!2.42e-13!63;CL:0000040!2.42e-13!63;CL:0000559!2.42e-13!63;CL:0002087!1.52e-12!119;CL:0000839!8.87e-12!70;CL:0000840!6.25e-10!5;CL:0001029!6.25e-10!5;CL:0000081!1.76e-09!11;CL:0000775!2.24e-09!3;CL:0000094!1.13e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000081;6.53e-17;11!CL:0000771;3.02e-11;2!CL:0001014;3.89e-11;2!CL:0001016;3.89e-11;2!CL:0000094;7.86e-11;8!CL:0000775;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,6.36e-17,11;CL:0000771,3.02e-11,2;CL:0001014,3.35e-11,2;CL:0001016,3.35e-11,2;CL:0000094,7.67e-11,8;CL:0000988,1.07e-10,177;CL:0000775,7.26e-08,3;CL:0000738,8.43e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!8.54e-08!1;DOID:0060061!8.54e-08!1;DOID:8691!8.54e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.45e-21;1!DOID:0060061;3.45e-21;1!DOID:8691;3.45e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.45e-21,1;DOID:0060061,3.45e-21,1;DOID:8691,3.45e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-19!102;UBERON:0003061!1.72e-19!102;UBERON:0002193!2.13e-17!112;UBERON:0002371!9.55e-14!80;UBERON:0001474!1.37e-12!86;UBERON:0004765!2.69e-10!101;UBERON:0001434!2.69e-10!101;UBERON:0002405!5.03e-10!115;UBERON:0003081!4.22e-07!216;UBERON:0000178!6.41e-07!15;UBERON:0000179!6.41e-07!15;UBERON:0000463!6.41e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.77e-19;10!UBERON:0000178;1.00e-12;15!UBERON:0000179;1.00e-12;15!UBERON:0000463;1.00e-12;15!UBERON:0000478;3.50e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.01e-18,10;UBERON:0000358,1.01e-18,10;UBERON:0000307,1.01e-18,10;UBERON:0000091,1.01e-18,10;UBERON:0000087,1.01e-18,10;UBERON:0007010,1.01e-18,10;UBERON:0007806,1.01e-18,10;UBERON:0008780,1.01e-18,10;UBERON:0005728,1.01e-18,10;UBERON:0000178,1.02e-12,15;UBERON:0000179,1.02e-12,15;UBERON:0000463,1.02e-12,15;UBERON:0000478,3.54e-08,24;UBERON:0002390,4.04e-07,98;UBERON:0003061,4.04e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,1.03423704220986,0.645484683583826,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.580418477257168,0,1.24564449799115,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.7564790076435,18.6581547809219,19.6313265070256,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9794389252279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.930053882193542,0.327130788511688,0,0,0,7.9994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:43307347..43307373,+ | |||
}} |
Revision as of 15:50, 20 January 2014
Short description: | p@chr17:43307347..43307373, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:43307347..43307373, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 6.36e-17 | 11 |
eosinophil | 3.02e-11 | 2 |
CD1a-positive Langerhans cell | 3.35e-11 | 2 |
immature CD1a-positive Langerhans cell | 3.35e-11 | 2 |
granulocyte | 7.67e-11 | 8 |
hematopoietic cell | 1.07e-10 | 177 |
neutrophil | 7.26e-08 | 3 |
leukocyte | 8.43e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.01e-18 | 10 |
blastocyst | 1.01e-18 | 10 |
blastula | 1.01e-18 | 10 |
bilaminar disc | 1.01e-18 | 10 |
inner cell mass | 1.01e-18 | 10 |
cleaving embryo | 1.01e-18 | 10 |
connecting stalk | 1.01e-18 | 10 |
inner cell mass derived epiblast | 1.01e-18 | 10 |
extraembryonic mesoderm | 1.01e-18 | 10 |
blood | 1.02e-12 | 15 |
haemolymphatic fluid | 1.02e-12 | 15 |
organism substance | 1.02e-12 | 15 |
extraembryonic structure | 3.54e-08 | 24 |
hematopoietic system | 4.04e-07 | 98 |
blood island | 4.04e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.45e-21 | 1 |
cutaneous T cell lymphoma | 3.45e-21 | 1 |
mycosis fungoides | 3.45e-21 | 1 |