FFCP PHASE1:Hg19::chr17:40575228..40575241,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9688 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=31bp_to_uc010wgi.1_5end | |||
|coexpression_cluster_id=C1780 | |||
|description=CAGE_peak_3_at_PTRF_5end | |||
|id=chr17:40575228..40575241,- | |||
|ontology_enrichment_celltype=CL:0000055!2.94e-36!180;CL:0000222!1.53e-25!119;CL:0000057!7.74e-21!75;CL:0000680!3.94e-19!57;CL:0000056!3.94e-19!57;CL:0000355!3.94e-19!57;CL:0000183!3.06e-18!59;CL:0000187!4.66e-18!54;CL:0000192!9.73e-16!42;CL:0000514!9.73e-16!42;CL:0000393!2.36e-15!60;CL:0000211!2.36e-15!60;CL:0000220!6.94e-15!246;CL:0002321!2.20e-14!248;CL:0000359!2.35e-13!32;CL:0000136!1.37e-09!15;CL:0000213!3.07e-08!57;CL:0000215!3.07e-08!57;CL:0002334!1.11e-07!12;CL:0002620!2.19e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.61e-13;32!CL:0000192;3.76e-12;43!CL:0000187;1.01e-10;55!CL:0000057;7.70e-09;73!CL:0000136;8.96e-09;13!CL:0000393;2.30e-08;61!CL:0000211;2.30e-08;61!CL:0002334;8.92e-08;12!CL:0002620;1.57e-07;23!CL:0002320;7.49e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.30e-26,121;CL:0000057,1.34e-21,76;CL:0000680,7.07e-20,58;CL:0000056,7.07e-20,58;CL:0000355,7.07e-20,58;CL:0000187,8.78e-19,55;CL:0000192,2.04e-16,43;CL:0000514,2.04e-16,43;CL:0000393,2.22e-15,61;CL:0000211,2.22e-15,61;CL:0000359,1.44e-13,32;CL:0002321,2.37e-13,250;CL:0000136,9.85e-10,15;CL:0000213,1.57e-08,58;CL:0000215,1.57e-08,58;CL:0002334,8.59e-08,12;CL:0002620,1.72e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.76e-12;43!CL:0000355;6.31e-11;58!CL:0000222;1.95e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.65e-23!79;UBERON:0007798!3.65e-23!79;UBERON:0000914!4.86e-23!83;UBERON:0002329!4.86e-23!83;UBERON:0003077!4.86e-23!83;UBERON:0003059!4.86e-23!83;UBERON:0007282!4.86e-23!83;UBERON:0009618!4.86e-23!83;UBERON:0007285!4.86e-23!83;UBERON:0004872!2.25e-22!84;UBERON:0000055!1.13e-21!69;UBERON:0004290!2.56e-21!70;UBERON:0001981!1.04e-20!60;UBERON:0007500!1.04e-20!60;UBERON:0004537!1.04e-20!60;UBERON:0006965!1.04e-20!60;UBERON:0000486!1.22e-20!82;UBERON:0002385!3.95e-20!63;UBERON:0001015!3.95e-20!63;UBERON:0000383!3.95e-20!63;UBERON:0005256!5.83e-20!143;UBERON:0001134!7.24e-20!61;UBERON:0002036!7.24e-20!61;UBERON:0003082!7.24e-20!61;UBERON:0001637!3.11e-18!42;UBERON:0003509!3.11e-18!42;UBERON:0004572!3.11e-18!42;UBERON:0000475!4.88e-18!365;UBERON:0003914!3.70e-17!118;UBERON:0002100!4.53e-17!216;UBERON:0001009!2.73e-16!113;UBERON:0000490!2.77e-16!138;UBERON:0004535!5.34e-16!110;UBERON:0004573!1.84e-14!33;UBERON:0004571!1.84e-14!33;UBERON:0000119!2.41e-14!312;UBERON:0000483!3.61e-14!309;UBERON:0000468!1.78e-13!659;UBERON:0000481!2.20e-13!347;UBERON:0003104!2.55e-13!238;UBERON:0009142!2.55e-13!238;UBERON:0000477!2.64e-13!286;UBERON:0003102!2.94e-12!95;UBERON:0000467!8.43e-11!625;UBERON:0004111!9.04e-11!241;UBERON:0000480!1.22e-10!626;UBERON:0002199!2.10e-08!45;UBERON:0002416!2.10e-08!45;UBERON:0000947!2.70e-08!21;UBERON:0010191!2.70e-08!21;UBERON:0000926!1.14e-07!448;UBERON:0004120!1.14e-07!448;UBERON:0006603!1.14e-07!448;UBERON:0007100!3.06e-07!27;UBERON:0000948!4.24e-07!24;UBERON:0005498!4.24e-07!24;UBERON:0004140!4.24e-07!24;UBERON:0009881!4.24e-07!24;UBERON:0004141!4.24e-07!24;UBERON:0003084!4.24e-07!24;UBERON:0007005!4.24e-07!24;UBERON:0004139!4.24e-07!24;UBERON:0004291!4.24e-07!24;UBERON:0001013!5.34e-07!14;UBERON:0000025!5.54e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.82e-13;42!UBERON:0003509;1.82e-13;42!UBERON:0004572;1.82e-13;42!UBERON:0004573;3.11e-13;33!UBERON:0004571;3.11e-13;33!UBERON:0007500;1.62e-11;56!UBERON:0001981;1.62e-11;56!UBERON:0004537;1.62e-11;56!UBERON:0000055;2.28e-10;65!UBERON:0002049;1.13e-09;75!UBERON:0007798;1.13e-09;75!UBERON:0000947;1.90e-08;21!UBERON:0010191;1.90e-08;21!UBERON:0002385;5.66e-08;31!UBERON:0001015;5.66e-08;31!UBERON:0000383;5.66e-08;31!UBERON:0003914;1.62e-07;74!UBERON:0002384;2.49e-07;198!UBERON:0001013;4.30e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,4.34e-23,78;UBERON:0007798,4.34e-23,78;UBERON:0007503,8.15e-23,78;UBERON:0004872,2.33e-22,83;UBERON:0002329,4.16e-22,71;UBERON:0003059,4.16e-22,71;UBERON:0007282,4.16e-22,71;UBERON:0004290,4.16e-22,71;UBERON:0009618,4.16e-22,71;UBERON:0007524,5.58e-22,73;UBERON:0003077,1.40e-21,72;UBERON:0007285,1.40e-21,72;UBERON:0000486,2.09e-21,83;UBERON:0000055,2.13e-21,68;UBERON:0002385,6.77e-21,64;UBERON:0001015,6.77e-21,64;UBERON:0000383,6.77e-21,64;UBERON:0001134,1.25e-20,62;UBERON:0002036,1.25e-20,62;UBERON:0003082,1.25e-20,62;UBERON:0007500,1.36e-20,59;UBERON:0001981,1.36e-20,59;UBERON:0004537,1.36e-20,59;UBERON:0006965,1.36e-20,59;UBERON:0005256,1.46e-18,122;UBERON:0001637,1.56e-18,42;UBERON:0003509,1.56e-18,42;UBERON:0004572,1.56e-18,42;UBERON:0003104,5.51e-18,160;UBERON:0009142,5.51e-18,160;UBERON:0000490,1.02e-17,148;UBERON:0001009,1.12e-16,112;UBERON:0003914,2.07e-16,117;UBERON:0004535,2.21e-16,109;UBERON:0004573,1.08e-14,33;UBERON:0004571,1.08e-14,33;UBERON:0002100,6.17e-14,199;UBERON:0000119,2.04e-13,309;UBERON:0000483,3.04e-13,306;UBERON:0003102,9.93e-13,99;UBERON:0004111,3.30e-09,240;UBERON:0002199,3.49e-09,46;UBERON:0002416,3.49e-09,46;UBERON:0000926,3.60e-09,315;UBERON:0004120,3.60e-09,315;UBERON:0006603,3.60e-09,315;UBERON:0000947,2.04e-08,21;UBERON:0010191,2.04e-08,21;UBERON:0002097,2.25e-07,41;UBERON:0007100,2.41e-07,27;UBERON:0000948,3.37e-07,24;UBERON:0005498,3.37e-07,24;UBERON:0004140,3.37e-07,24;UBERON:0009881,3.37e-07,24;UBERON:0004141,3.37e-07,24;UBERON:0003084,3.37e-07,24;UBERON:0007005,3.37e-07,24;UBERON:0004139,3.37e-07,24;UBERON:0004291,3.37e-07,24;UBERON:0001013,4.26e-07,14 | |||
|phase1_expression=79.9384868790449,51.5982262577269,72.4505637053292,65.0476439295348,43.8021872538742,73.276436024431,45.5939780702959,42.3252315195977,49.6252693579693,15.7269719360966,11.8626198555313,3.49506195408276,6.59417445571134,37.253672240974,43.0816588446291,14.1188280754873,13.2592796165275,13.1455816269727,21.9569759455728,15.6363743757521,36.7201244239655,33.5396551981554,8.01460763966959,13.003070381924,17.9525974620568,0,0,0,0,0,0.154816123316076,5.51652734687356,12.3494426699083,7.39508020333575,0,0,0.293600439334847,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.894334546747,20.1210257911091,27.490450796359,48.7942855719164,91.7448376463678,57.3592215084862,7.95285947051099,39.9040593648161,10.6824343395397,15.742787219842,16.3372701389214,11.853606332543,12.750335090239,12.2358866118862,0,0,0.531831842075461,0,0,0,32.0007475860395,22.3660994727592,32.6312071511139,56.530794192401,33.5599548967925,39.8921160813098,31.7672349135952,28.4258435086262,24.9036383880697,14.0582657361161,21.7527831238939,21.2876189601184,32.9483777690029,15.4418493745265,29.9752520716251,18.2171445699523,11.0019392586823,11.5989824897822,26.0638283692002,34.1735637444526,28.0298668213523,0,0,17.4437620857014,50.1941671212272,52.9315538757943,46.7404408270662,53.6384480800282,38.3041852774226,38.1260768096769,35.2271685908026,38.7268051014941,21.7847724779836,15.4917272880141,13.2404141521902,10.5950199351452,17.86145365888,13.5906430463602,22.1633654549528,26.2417037910447,34.2237478463624,9.0424563955699,12.1404708276099,10.6742613093709,27.1525047769008,18.547981914077,26.5547257621717,38.0160914330257,39.8099756138477,53.6995203543436,63.9570146216452,14.6452419140038,11.2606667884768,28.814668010355,39.0690082583946,56.7002422228186,28.69546925116,23.9341906467644,58.3016315988801,39.2945595426164,45.1414949469867,62.7190390816401,27.7211303651401,47.921140448487,48.7626163588765,39.9999907411801,32.9337077444851,64.6230462064933,57.2550369555102,25.3784309205535,60.3516307278244,26.90081022678,33.4034366851661,11.0158686303079,11.4553370648151,8.03052867089211,0.121973706129595,0.265059536642971,0.464775771478074,0.414644220061482,0.756962552626885,1.45990943630332,21.9029345261742,61.751130066517,37.2964287651697,68.2620854207009,75.7973455753065,9.93777120334689,10.9580048550766,6.7483088367375,10.919103300507,10.0224544282507,11.3889897173326,6.33707148352773,6.86775127938711,5.38646019724947,19.1920418202409,43.4749498790682,42.8036971784656,89.6753139451806,1.26755034821831,0,4.13552934676983,0,0.983907508344908,11.3234754797027,20.0843022297785,11.240175325762,5.42856451022807,6.85154494173119,14.9871820442749,37.4376522700648,12.9898207822746,2.66639931442677,23.9513736241076,17.7570730746121,21.2973335785241,12.9372823519527,0,0,0,0.234004265139238,0.148631162288728,2.81201501960331,26.7091583836187,7.79763034833126,11.9112835194788,7.55648240136301,19.1691339582606,0.985326475791887,2.72950145441001,6.42717158176393,6.05303804351238,8.2057581727147,1.26995788584338,3.81988425558278,5.86087236050235,13.6857956818164,3.29047976650635,3.00343057843917,2.00078502841405,12.2222881936443,8.7192013766656,14.0076125918015,22.3640068260956,96.5672403800083,17.751357803676,28.721316591166,40.5629003954328,33.4369586540785,48.2287048879146,43.1603930006081,14.4407773594729,19.5343777940919,17.2880470723961,19.2184348733304,13.5048940522167,11.087326221068,19.2921201318135,27.0175372166091,27.6925185574298,0,0,0,44.5702231214344,53.9851098420335,17.1164286048862,52.4108330136637,39.8624065747744,22.9198032947066,0,0,0,0,5.08189248444927,2.60279707715243,4.63973287666617,1.84267891867784,12.1208362814101,0,0,0,40.2428092838779,34.5117659531177,18.7172866352818,66.5506756898583,63.6991490005868,56.6151669971825,69.5820005056716,88.1772072202216,45.481500811197,33.1113828136016,56.4591758755121,57.5231805850114,39.6189281974458,12.5312740776154,15.7845974952994,0,0,0,7.88131685760275,9.98612637062982,6.95497674658265,84.1085468505653,78.8794542700641,66.2357822862054,74.1925674190509,75.7326728618721,76.7273203855008,57.8830459135465,33.6177132489789,43.325060976403,40.1601792907527,36.8670644720371,40.9060532179057,0.604297247958111,28.0709058424599,4.14364450211533,35.2480355865343,50.6213447058673,50.2206509294594,3.60959690325929,2.69553679865452,7.0591479225917,10.2297457257282,2.32213583564327,19.3346752920524,20.4112446331819,11.6594594695155,44.7259032801839,15.9858398150873,16.0540727633553,5.09752546090077,3.3243040357149,8.95499018888713,0,0,2.56450125116389,5.9042636225947,8.78521665593618,7.62503486193145,0.824125183365091,1.07262349896764,14.9309039879005,20.1518676271322,54.6325361470142,19.5274850950086,20.6425146933623,21.4905144616581,14.3350035383912,24.8140765645712,30.16347233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| |||
|short_description=p3@PTRF | |||
}} |
Revision as of 15:28, 20 January 2014
Short description: | p3@PTRF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTRF_5end |
Coexpression cluster: | C1780_Mesenchymal_tenocyte_Osteoblast_Smooth_mature_Synoviocyte_Chondrocyte |
Association with transcript: | 31bp_to_uc010wgi.1_5end |
EntrezGene: | PTRF |
HGNC: | 9688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.30e-26 | 121 |
fibroblast | 1.34e-21 | 76 |
muscle precursor cell | 7.07e-20 | 58 |
myoblast | 7.07e-20 | 58 |
multi-potent skeletal muscle stem cell | 7.07e-20 | 58 |
muscle cell | 8.78e-19 | 55 |
smooth muscle cell | 2.04e-16 | 43 |
smooth muscle myoblast | 2.04e-16 | 43 |
electrically responsive cell | 2.22e-15 | 61 |
electrically active cell | 2.22e-15 | 61 |
vascular associated smooth muscle cell | 1.44e-13 | 32 |
embryonic cell | 2.37e-13 | 250 |
fat cell | 9.85e-10 | 15 |
lining cell | 1.57e-08 | 58 |
barrier cell | 1.57e-08 | 58 |
preadipocyte | 8.59e-08 | 12 |
skin fibroblast | 1.72e-07 | 23 |