FFCP PHASE1:Hg19::chr17:38645058..38645086,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3630 | |||
|description=CAGE_peak_at_chr17:38645058..38645086,+ | |||
|id=chr17:38645058..38645086,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.36e-31!254;CL:0002076!8.27e-21!43;CL:0000223!3.06e-19!59;CL:0002368!1.93e-17!13;CL:0002159!1.08e-13!13;CL:0000244!2.40e-10!4;CL:0000731!2.40e-10!4;CL:0000240!7.44e-10!6;CL:0000311!7.44e-10!6;CL:0000079!7.44e-10!6;CL:0000237!7.44e-10!6;CL:0000036!7.44e-10!6;CL:0000357!7.44e-10!6;CL:0000114!7.44e-10!6;CL:0002202!9.66e-10!9;CL:0002632!9.66e-10!9;CL:0002328!1.48e-08!3;CL:0000068!3.18e-08!3;CL:0000069!3.18e-08!3;CL:0000307!3.18e-08!3;CL:0000377!3.18e-08!3;CL:0000622!4.65e-08!5;CL:0002623!6.57e-08!3;CL:0000312!6.79e-08!5;CL:0000362!2.31e-07!8;CL:0002621!2.98e-07!3;CL:0002251!3.76e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.39e-24;13!CL:0002159;4.39e-22;14!CL:0002076;7.94e-21;42!CL:0002328;1.27e-16;3!CL:0000622;7.15e-16;5!CL:0002623;2.77e-15;3!CL:0002202;1.16e-14;9!CL:0002632;1.16e-14;9!CL:0000240;8.44e-14;6!CL:0000311;8.44e-14;6!CL:0000079;8.44e-14;6!CL:0000237;8.44e-14;6!CL:0000154;2.95e-13;6!CL:0000244;1.37e-12;4!CL:0000731;1.37e-12;4!CL:0002327;2.58e-12;4!CL:0000575;1.09e-11;2!CL:0002536;2.44e-11;2!CL:0000312;7.25e-10;5!CL:0000362;3.11e-09;9!CL:0000150;7.02e-09;9!CL:0002251;2.33e-08;20!CL:0000307;4.34e-08;3!CL:0002077;1.09e-07;34!CL:0002231;1.11e-07;3!CL:0002166;1.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.32e-27,42;CL:0002368,1.93e-24,13;CL:0002159,4.61e-22,14;CL:0000066,4.45e-19,253;CL:0000223,1.02e-18,58;CL:0002328,1.21e-16,3;CL:0000622,5.03e-16,5;CL:0002623,3.00e-15,3;CL:0002202,1.04e-14,9;CL:0002632,1.04e-14,9;CL:0000240,1.07e-13,6;CL:0000311,1.07e-13,6;CL:0000079,1.07e-13,6;CL:0000237,1.07e-13,6;CL:0000036,1.07e-13,6;CL:0000357,1.07e-13,6;CL:0000114,1.07e-13,6;CL:0000154,2.21e-13,6;CL:0000244,1.22e-12,4;CL:0000731,1.22e-12,4;CL:0002327,2.54e-12,4;CL:0000575,1.12e-11,2;CL:0002536,2.32e-11,2;CL:0000312,7.61e-10,5;CL:0000362,2.56e-09,9;CL:0000150,5.81e-09,9;CL:0002077,2.33e-08,34;CL:0002251,2.48e-08,20;CL:0000068,3.92e-08,3;CL:0000069,3.92e-08,3;CL:0000307,3.92e-08,3;CL:0000377,3.92e-08,3;CL:0002321,7.11e-08,250;CL:0002231,1.58e-07,3;CL:0002166,2.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;8.44e-14;6!CL:0000114;8.44e-14;6!CL:0000223;4.17e-11;58!CL:0000377;4.34e-08;3 | |||
|ontology_enrichment_disease=DOID:305!2.87e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.18e-26!72;UBERON:0004119!1.20e-22!169;UBERON:0000925!1.20e-22!169;UBERON:0006595!1.20e-22!169;UBERON:0000065!8.08e-20!53;UBERON:0001737!1.90e-18!9;UBERON:0008947!1.30e-16!38;UBERON:0003258!1.30e-16!38;UBERON:0000077!7.04e-15!130;UBERON:0000072!2.85e-14!46;UBERON:0001007!3.12e-14!155;UBERON:0001555!3.12e-14!155;UBERON:0007026!3.12e-14!155;UBERON:0001041!4.16e-13!98;UBERON:0004921!5.15e-12!129;UBERON:0004185!5.15e-12!129;UBERON:0000365!7.98e-12!5;UBERON:0005631!9.51e-12!14;UBERON:0000158!9.51e-12!14;UBERON:0001557!2.08e-11!19;UBERON:0000161!2.94e-10!35;UBERON:0005910!8.96e-10!6;UBERON:0001044!1.83e-09!6;UBERON:0003293!1.83e-09!6;UBERON:0003294!1.83e-09!6;UBERON:0010047!1.83e-09!6;UBERON:0000167!1.83e-09!6;UBERON:0005911!5.56e-09!82;UBERON:0004815!1.48e-08!3;UBERON:0002031!1.48e-08!3;UBERON:0000305!1.56e-08!7;UBERON:0000166!1.83e-08!21;UBERON:0002365!7.37e-08!31;UBERON:0002330!7.37e-08!31;UBERON:0007196!9.84e-08!14;UBERON:0001558!9.84e-08!14;UBERON:0002530!1.36e-07!59;UBERON:0005153!1.42e-07!37;UBERON:0003408!1.94e-07!10;UBERON:0004871!2.10e-07!8;UBERON:0003102!2.77e-07!95;UBERON:0001949!2.98e-07!3;UBERON:0000165!3.30e-07!28;UBERON:0000930!3.30e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.27e-16;3!UBERON:0002031;1.27e-16;3!UBERON:0001911;2.58e-12;4!UBERON:0000305;1.07e-11;7!UBERON:0000365;3.66e-10;5!UBERON:0002185;3.66e-10;5!UBERON:0007196;1.12e-08;15!UBERON:0001558;1.12e-08;15!UBERON:0000065;1.37e-08;44!UBERON:0005910;1.54e-08;6!UBERON:0005631;3.23e-08;10!UBERON:0000158;3.23e-08;10!UBERON:0001044;6.89e-08;6!UBERON:0003293;6.89e-08;6!UBERON:0003294;6.89e-08;6!UBERON:0010047;6.89e-08;6!UBERON:0003408;6.89e-08;6!UBERON:0000167;6.89e-08;6!UBERON:0000485;2.25e-07;7!UBERON:0000486;3.32e-07;12!UBERON:0002365;6.16e-07;31!UBERON:0002330;6.16e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.21e-16,3;UBERON:0002031,1.21e-16,3;UBERON:0001911,2.54e-12,4;UBERON:0005333,2.54e-12,4;UBERON:0008425,2.54e-12,4;UBERON:0005311,2.54e-12,4;UBERON:0000305,1.01e-11,7;UBERON:0001004,2.00e-10,74;UBERON:0004871,2.86e-10,8;UBERON:0000365,3.34e-10,5;UBERON:0002185,3.55e-10,5;UBERON:0003102,2.39e-09,99;UBERON:0005157,3.39e-09,47;UBERON:0004119,3.58e-09,160;UBERON:0000925,3.58e-09,160;UBERON:0006595,3.58e-09,160;UBERON:0007196,1.05e-08,15;UBERON:0001558,1.05e-08,15;UBERON:0005910,1.43e-08,6;UBERON:0001044,7.16e-08,6;UBERON:0003293,7.16e-08,6;UBERON:0003294,7.16e-08,6;UBERON:0010047,7.16e-08,6;UBERON:0000167,7.16e-08,6;UBERON:0005153,1.01e-07,37;UBERON:0000065,1.14e-07,54;UBERON:0002365,4.35e-07,31;UBERON:0002330,4.35e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,1.31064823278103,4.74780560811216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,3.0120591877825,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5500670180478,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,1.18009283054671,0.482022059766964,0.110293972732394,1.74303555273925,0.949082476444386,0.134831308160164,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,2.85350742062426,1.1240175325762,3.01586917234893,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,1.27597587518148,1.70161193135412,2.03443756959773,12.2682457332868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.991709492165869,1.92190067365106,1.78657797492418,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,2.68120910214315,5.44454924306613,0.188287601553558,2.58303223602738,3.36942951335251,3.99087138183008,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0.432164393964449,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8747061194316,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,1.7071847709395,1.38251932362818,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.606351566874658,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:38645058..38645086,+ | |||
}} |
Revision as of 15:12, 20 January 2014
Short description: | p@chr17:38645058..38645086, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38645058..38645086, + |
Coexpression cluster: | C3630_Sebocyte_Mammary_Keratinocyte_Urothelial_Tracheal_Corneal_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.21e-16 | 3 |
epithelium of bronchus | 1.21e-16 | 3 |
mammary gland | 2.54e-12 | 4 |
mammary bud | 2.54e-12 | 4 |
mammary ridge | 2.54e-12 | 4 |
mammary placode | 2.54e-12 | 4 |
amnion | 1.01e-11 | 7 |
respiratory system | 2.00e-10 | 74 |
somatic layer of lateral plate mesoderm | 2.86e-10 | 8 |
urothelium | 3.34e-10 | 5 |
bronchus | 3.55e-10 | 5 |
surface structure | 2.39e-09 | 99 |
epithelial fold | 3.39e-09 | 47 |
endoderm-derived structure | 3.58e-09 | 160 |
endoderm | 3.58e-09 | 160 |
presumptive endoderm | 3.58e-09 | 160 |
tracheobronchial tree | 1.05e-08 | 15 |
lower respiratory tract | 1.05e-08 | 15 |
transitional epithelium | 1.43e-08 | 6 |
saliva-secreting gland | 7.16e-08 | 6 |
gland of oral region | 7.16e-08 | 6 |
gland of foregut | 7.16e-08 | 6 |
oral gland | 7.16e-08 | 6 |
oral cavity | 7.16e-08 | 6 |
epithelial bud | 1.01e-07 | 37 |
respiratory tract | 1.14e-07 | 54 |
exocrine gland | 4.35e-07 | 31 |
exocrine system | 4.35e-07 | 31 |