FFCP PHASE1:Hg19::chr17:37934204..37934241,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=236bp_to_uc010wel.1_5end | |||
|coexpression_cluster_id=C1431 | |||
|description=CAGE_peak_3_at_IKZF3_5end | |||
|id=chr17:37934204..37934241,- | |||
|ontology_enrichment_celltype=CL:0000542!1.47e-50!53;CL:0000051!1.47e-50!53;CL:0000838!2.07e-49!52;CL:0000738!3.00e-41!140;CL:0002087!2.86e-38!119;CL:0002031!1.17e-33!124;CL:0000037!4.95e-29!172;CL:0000566!4.95e-29!172;CL:0000988!9.13e-29!182;CL:0002032!4.13e-27!165;CL:0000837!4.13e-27!165;CL:0000945!1.13e-25!24;CL:0000826!1.13e-25!24;CL:0000084!2.34e-21!25;CL:0000827!2.34e-21!25;CL:0000791!2.93e-20!18;CL:0000789!2.93e-20!18;CL:0002420!2.93e-20!18;CL:0002419!2.93e-20!18;CL:0000790!2.93e-20!18;CL:0000236!3.10e-15!14;CL:0000625!6.43e-14!11;CL:0000624!1.65e-07!6;CL:0000080!5.61e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.42e-39;53!CL:0000945;1.67e-39;24!CL:0000791;1.05e-29;18!CL:0000789;1.05e-29;18!CL:0002419;1.05e-29;18!CL:0000084;4.83e-25;25!CL:0000236;4.51e-23;13!CL:0000625;5.02e-22;11!CL:0002087;1.01e-11;104!CL:0000624;2.29e-11;6!CL:0000898;6.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.75e-70,53;CL:0000051,1.75e-70,53;CL:0000838,1.30e-68,52;CL:0000945,1.74e-39,24;CL:0000826,1.74e-39,24;CL:0002087,1.65e-34,115;CL:0000738,2.33e-32,136;CL:0000791,7.82e-30,18;CL:0000789,7.82e-30,18;CL:0002420,7.82e-30,18;CL:0002419,7.82e-30,18;CL:0000790,7.82e-30,18;CL:0002031,6.62e-28,120;CL:0000084,4.06e-25,25;CL:0000827,4.06e-25,25;CL:0000236,1.17e-24,14;CL:0000988,2.60e-24,177;CL:0000037,3.38e-23,168;CL:0000625,4.36e-22,11;CL:0002032,2.26e-20,161;CL:0000837,2.26e-20,161;CL:0000624,1.92e-11,6;CL:0000898,6.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.42e-39;53!CL:0000790;1.05e-29;18 | |||
|ontology_enrichment_disease=DOID:0060058!9.60e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.41e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.42e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.13e-17!115;UBERON:0000178!9.00e-14!15;UBERON:0000179!9.00e-14!15;UBERON:0000463!9.00e-14!15;UBERON:0002390!1.39e-10!102;UBERON:0003061!1.39e-10!102;UBERON:0002193!5.66e-10!112;UBERON:0004177!9.15e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.87e-22;15!UBERON:0000179;2.87e-22;15!UBERON:0000463;2.87e-22;15!UBERON:0002390;2.27e-16;32!UBERON:0002193;1.88e-10;42!UBERON:0004177;6.61e-07;5!UBERON:0005057;6.61e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.46e-22,15;UBERON:0000179,3.46e-22,15;UBERON:0000463,3.46e-22,15;UBERON:0004177,2.39e-07,7;UBERON:0005057,2.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48851376329922,7.79955599774485,9.05173985107311,1.57345710739562,8.06041736004147,0.619264493264304,0,0,0,30.7544786303797,24.7374464528113,0,1.10799081706375,0.601633342410425,1.51907609501096,0.447830948479849,2.91504299417082,0.257575567634187,0.290796477559129,0.377875943688809,0,0,0,0,0,0.512321413058201,0,0,0,1.35426486594342,0,0.272906150057846,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0.870627715885752,0.56738522469114,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,28.1593991138116,21.8455444504853,19.5692035849982,17.4959391252268,23.2229672480887,16.0930683187255,15.2040320740518,17.1729675816366,11.9534723512984,11.7447437874188,11.0859236156316,0,0,0.263384084775077,4.32761494250433,1.96505381374582,3.90642848099067,4.51403537554831,3.91106719960308,1.89379122293893,0,23.3961959458865,16.7925367260657,23.2610589312802,27.8927979677966,67.3760341757051,68.9314542067355,1.15106533222573,0.276350017785848,0.869409257205157,0.14828656316206,0.267540828089713,0,7.59172596073693,9.58051234004803,20.2740192834752,17.2053390573262,15.2911398875566,14.3238359848412,18.0585888445191,8.2816315492775,12.7986611154418,22.4875307794223,17.2847393992132,22.9915839137893,6.8546292696409,6.95344509037119,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0.649094787309367,0.522389211897802,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71218818712231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,7.68419964787516,4.9594342217689,7.44389610422541,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,2.5885704098234,6.08347079479633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,8.62660935694688,6.117097657139,5.12682468456746,6.19402616190251,6.17043409629291,5.18778648954174,6.48037724685738,9.51750211553125,0,0,0,8.9185524060345,0,3.41480848072388,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,2.22886768554957,0,0,0.890894042497916,0,0,0,0,0,0,0.19924798825107,16.8533188474,0,0,6.40040988397561,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76915129006678,1.22206028986725,1.18608451472249,2.22415090103705,2.40170483862547,0.067401132980677,0,0,25.3612157009776,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64881328030313,0,0,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0,0.13223260174269,0,0,2.24253566392159,0.628817220398664,1.24271716604159,6.94632430536731,4.54506753365272,22.4098381020848,0,0,0,0,0,0,0,0.366078794705889,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.398594520940089,0.490696182767533,0,0,0,0.79994958341972,0,14.1216283321869,0,0,0,3.73246356019784,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0,1.07140367175657,0,0,0,0.0887023701626388,4.83982747734273,0,0.135939465953663,0,0,0,0.313972371402056,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,2.31522474323834,2.18559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,23.8719151668828,10.7000094036138,0.0999411559249289,0,0,0,0,2.75237570042724,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,1.91910583710883,0,4.77957932786445,3.47618400056804,0,0.318235791390825,0,1.95945073107265,0,22.2261774948139,2.22338836717297,0,0,0,0,0,0,0.855690109280065,0,0,11.6738800282795,5.12909587685173 | |||
|short_description=p3@IKZF3 | |||
}} |
Revision as of 15:02, 20 January 2014
Short description: | p3@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IKZF3_5end |
Coexpression cluster: | C1431_CD4_Burkitt_CD8_diffuse_tonsil_spleen_lymphoma |
Association with transcript: | 236bp_to_uc010wel.1_5end |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.75e-70 | 53 |
common lymphoid progenitor | 1.75e-70 | 53 |
lymphoid lineage restricted progenitor cell | 1.30e-68 | 52 |
lymphocyte of B lineage | 1.74e-39 | 24 |
pro-B cell | 1.74e-39 | 24 |
nongranular leukocyte | 1.65e-34 | 115 |
leukocyte | 2.33e-32 | 136 |
mature alpha-beta T cell | 7.82e-30 | 18 |
alpha-beta T cell | 7.82e-30 | 18 |
immature T cell | 7.82e-30 | 18 |
mature T cell | 7.82e-30 | 18 |
immature alpha-beta T cell | 7.82e-30 | 18 |
hematopoietic lineage restricted progenitor cell | 6.62e-28 | 120 |
T cell | 4.06e-25 | 25 |
pro-T cell | 4.06e-25 | 25 |
B cell | 1.17e-24 | 14 |
hematopoietic cell | 2.60e-24 | 177 |
hematopoietic stem cell | 3.38e-23 | 168 |
CD8-positive, alpha-beta T cell | 4.36e-22 | 11 |
hematopoietic oligopotent progenitor cell | 2.26e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.26e-20 | 161 |
CD4-positive, alpha-beta T cell | 1.92e-11 | 6 |
naive T cell | 6.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.46e-22 | 15 |
haemolymphatic fluid | 3.46e-22 | 15 |
organism substance | 3.46e-22 | 15 |
hemopoietic organ | 2.39e-07 | 7 |
immune organ | 2.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.42e-07 | 10 |