FFCP PHASE1:Hg19::chr17:36720231..36720253,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29506 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C0H9 | |||
|association_with_transcript=0bp_to_uc002hqf.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_15_at_SRCIN1_5end | |||
|id=chr17:36720231..36720253,- | |||
|ontology_enrichment_celltype=CL:0000039!9.58e-11!7;CL:0000586!9.58e-11!7;CL:0002322!6.34e-09!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3 | |||
|ontology_enrichment_disease=DOID:3095!1.45e-12!22;DOID:2994!1.45e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:171;3.84e-14;10!DOID:3095;5.82e-07;22!DOID:2994;5.82e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.97e-14,10;DOID:3095,5.91e-07,22;DOID:2994,5.91e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-43!57;UBERON:0005068!1.48e-43!57;UBERON:0006241!1.48e-43!57;UBERON:0007135!1.48e-43!57;UBERON:0002346!6.63e-39!90;UBERON:0002616!2.92e-38!59;UBERON:0001017!1.55e-36!82;UBERON:0005743!1.39e-34!86;UBERON:0003075!3.75e-32!86;UBERON:0007284!3.75e-32!86;UBERON:0000955!1.85e-31!69;UBERON:0006238!1.85e-31!69;UBERON:0000073!8.92e-31!94;UBERON:0001016!8.92e-31!94;UBERON:0004733!1.04e-30!12;UBERON:0002028!1.04e-30!12;UBERON:0007277!1.04e-30!12;UBERON:0003076!5.02e-30!15;UBERON:0003057!5.02e-30!15;UBERON:0004732!3.19e-28!13;UBERON:0002680!3.84e-25!9;UBERON:0001895!3.84e-25!9;UBERON:0010092!3.84e-25!9;UBERON:0007023!9.77e-23!115;UBERON:0002780!1.61e-20!41;UBERON:0001890!1.61e-20!41;UBERON:0006240!1.61e-20!41;UBERON:0002298!3.84e-20!8;UBERON:0003080!5.76e-20!42;UBERON:0000924!7.15e-20!173;UBERON:0006601!7.15e-20!173;UBERON:0000033!5.14e-17!123;UBERON:0000153!5.65e-16!129;UBERON:0007811!5.65e-16!129;UBERON:0004121!6.62e-16!169;UBERON:0002020!8.96e-16!34;UBERON:0003528!8.96e-16!34;UBERON:0001893!9.35e-16!34;UBERON:0000473!2.37e-14!8;UBERON:0000988!4.02e-14!3;UBERON:0006331!9.48e-14!3;UBERON:0002791!1.14e-13!33;UBERON:0002037!1.55e-13!6;UBERON:0006215!1.55e-13!6;UBERON:0003056!7.61e-13!61;UBERON:0002308!2.54e-12!9;UBERON:0000125!2.54e-12!9;UBERON:0001869!1.31e-11!32;UBERON:0003135!2.29e-10!11;UBERON:0001897!3.36e-10!2;UBERON:0000025!6.46e-10!194;UBERON:0002148!1.10e-09!2;UBERON:0009662!1.10e-09!2;UBERON:0001950!1.97e-09!20;UBERON:0002619!1.55e-08!22;UBERON:0000956!1.90e-07!25;UBERON:0000203!1.90e-07!25;UBERON:0001896!2.37e-07!3;UBERON:0005290!2.37e-07!3;UBERON:0010096!2.37e-07!3;UBERON:0000200!3.53e-07!6;UBERON:0004111!6.68e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.84e-50;6!UBERON:0004733;2.40e-44;12!UBERON:0002028;2.40e-44;12!UBERON:0004732;5.30e-41;13!UBERON:0002680;8.87e-34;9!UBERON:0001895;8.87e-34;9!UBERON:0002346;1.27e-33;4!UBERON:0000923;1.27e-33;4!UBERON:0010316;1.27e-33;4!UBERON:0005291;1.27e-33;4!UBERON:0002050;3.80e-27;5!UBERON:0005423;3.80e-27;5!UBERON:0001896;3.06e-12;3!UBERON:0005290;3.06e-12;3!UBERON:0000073;6.36e-08;53!UBERON:0002616;6.36e-08;53!UBERON:0002298;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0004733,2.27e-44,12;UBERON:0002028,2.27e-44,12;UBERON:0007277,2.27e-44,12;UBERON:0004732,5.03e-41,13;UBERON:0003076,1.14e-35,15;UBERON:0003057,1.14e-35,15;UBERON:0002680,8.87e-34,9;UBERON:0001895,8.87e-34,9;UBERON:0010092,8.87e-34,9;UBERON:0002346,4.44e-14,86;UBERON:0001896,2.89e-12,3;UBERON:0005290,2.89e-12,3;UBERON:0010096,2.89e-12,3;UBERON:0000073,2.17e-10,53;UBERON:0002616,2.17e-10,53;UBERON:0001049,7.17e-10,56;UBERON:0005068,7.17e-10,56;UBERON:0006241,7.17e-10,56;UBERON:0007135,7.17e-10,56;UBERON:0000955,3.92e-08,68;UBERON:0006238,3.92e-08,68;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0001017,6.23e-07,81;UBERON:0003075,6.23e-07,82;UBERON:0007284,6.23e-07,82;UBERON:0002298,8.97e-07,6 | |||
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|short_description=p15@SRCIN1 | |||
}} |
Revision as of 14:54, 20 January 2014
Short description: | p15@SRCIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SRCIN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_uc002hqf.1_5end |
EntrezGene: | SRCIN1 |
HGNC: | 29506 |
UniProt: | Q9C0H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
segmental subdivision of hindbrain | 2.27e-44 | 12 |
hindbrain | 2.27e-44 | 12 |
presumptive hindbrain | 2.27e-44 | 12 |
segmental subdivision of nervous system | 5.03e-41 | 13 |
posterior neural tube | 1.14e-35 | 15 |
chordal neural plate | 1.14e-35 | 15 |
regional part of metencephalon | 8.87e-34 | 9 |
metencephalon | 8.87e-34 | 9 |
future metencephalon | 8.87e-34 | 9 |
neurectoderm | 4.44e-14 | 86 |
medulla oblongata | 2.89e-12 | 3 |
myelencephalon | 2.89e-12 | 3 |
future myelencephalon | 2.89e-12 | 3 |
regional part of nervous system | 2.17e-10 | 53 |
regional part of brain | 2.17e-10 | 53 |
neural tube | 7.17e-10 | 56 |
neural rod | 7.17e-10 | 56 |
future spinal cord | 7.17e-10 | 56 |
neural keel | 7.17e-10 | 56 |
brain | 3.92e-08 | 68 |
future brain | 3.92e-08 | 68 |
ectoderm-derived structure | 3.21e-07 | 171 |
ectoderm | 3.21e-07 | 171 |
presumptive ectoderm | 3.21e-07 | 171 |
central nervous system | 6.23e-07 | 81 |
neural plate | 6.23e-07 | 82 |
presumptive neural plate | 6.23e-07 | 82 |
brainstem | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.97e-14 | 10 |
germ cell and embryonal cancer | 5.91e-07 | 22 |
germ cell cancer | 5.91e-07 | 22 |