FFCP PHASE1:Hg19::chr17:33396602..33396623,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117584 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24821 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-56bp_to_uc010cti.1_5end | |||
|coexpression_cluster_id=C507 | |||
|description=CAGE_peak_5_at_RFFL_5end | |||
|id=chr17:33396602..33396623,- | |||
|ontology_enrichment_celltype=CL:0002087!1.53e-13!119;CL:0000738!5.08e-13!140;CL:0002031!1.26e-12!124;CL:0002057!6.43e-10!42;CL:0002194!8.85e-10!63;CL:0000576!8.85e-10!63;CL:0000040!8.85e-10!63;CL:0000559!8.85e-10!63;CL:0000945!1.07e-09!24;CL:0000826!1.07e-09!24;CL:0002032!1.39e-09!165;CL:0000837!1.39e-09!165;CL:0002009!2.53e-09!65;CL:0000860!5.44e-09!45;CL:0000037!8.12e-09!172;CL:0000566!8.12e-09!172;CL:0000839!2.66e-08!70;CL:0000557!4.07e-08!71;CL:0000988!7.79e-08!182;CL:0000766!2.89e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.79e-18;24!CL:0000453;4.33e-11;5!CL:0002363;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.79e-18,24;CL:0000826,1.79e-18,24;CL:0000738,1.30e-11,136;CL:0000838,2.85e-11,52;CL:0000453,4.33e-11,5;CL:0000542,4.77e-11,53;CL:0000051,4.77e-11,53;CL:0002032,1.40e-09,161;CL:0000837,1.40e-09,161;CL:0002087,1.59e-09,115;CL:0000037,4.07e-09,168;CL:0002031,4.45e-09,120;CL:0000988,1.42e-08,177;CL:0002363,2.40e-07,2;CL:0000008,2.40e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.05e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.03e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.05e-14;1!DOID:0070004;8.05e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,9.73e-14,1;DOID:0070004,9.73e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.56e-20!57;UBERON:0005068!2.56e-20!57;UBERON:0006241!2.56e-20!57;UBERON:0007135!2.56e-20!57;UBERON:0002616!4.03e-16!59;UBERON:0003075!1.33e-14!86;UBERON:0007284!1.33e-14!86;UBERON:0001017!4.76e-14!82;UBERON:0000955!7.61e-14!69;UBERON:0006238!7.61e-14!69;UBERON:0002780!1.28e-13!41;UBERON:0001890!1.28e-13!41;UBERON:0006240!1.28e-13!41;UBERON:0002346!1.32e-13!90;UBERON:0001893!2.77e-13!34;UBERON:0003080!3.46e-13!42;UBERON:0005743!4.65e-13!86;UBERON:0002791!3.92e-12!33;UBERON:0007023!9.78e-12!115;UBERON:0002020!1.31e-11!34;UBERON:0003528!1.31e-11!34;UBERON:0002308!1.81e-11!9;UBERON:0000125!1.81e-11!9;UBERON:0000073!3.82e-11!94;UBERON:0001016!3.82e-11!94;UBERON:0003056!4.01e-11!61;UBERON:0009663!4.32e-11!7;UBERON:0001869!1.47e-10!32;UBERON:0002298!1.77e-10!8;UBERON:0000153!3.49e-09!129;UBERON:0007811!3.49e-09!129;UBERON:0003076!1.06e-08!15;UBERON:0003057!1.06e-08!15;UBERON:0002390!1.57e-08!102;UBERON:0003061!1.57e-08!102;UBERON:0000033!1.58e-08!123;UBERON:0002420!1.91e-08!9;UBERON:0007245!1.91e-08!9;UBERON:0010009!1.91e-08!9;UBERON:0010011!1.91e-08!9;UBERON:0000454!1.91e-08!9;UBERON:0001896!5.72e-08!3;UBERON:0005290!5.72e-08!3;UBERON:0010096!5.72e-08!3;UBERON:0002371!1.41e-07!80;UBERON:0002193!3.32e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.51e-13;1!UBERON:0009661;1.51e-13;1!UBERON:0002950;1.51e-13;1!UBERON:0001891;1.51e-13;1!UBERON:0009663;6.52e-08;7!UBERON:0001875;2.05e-07;2!UBERON:0003566;2.05e-07;2!UBERON:0001777;2.05e-07;2!UBERON:0006514;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.10e-13,1;UBERON:0009661,1.10e-13,1;UBERON:0002950,1.10e-13,1;UBERON:0001891,1.10e-13,1;UBERON:0009616,1.10e-13,1;UBERON:0010286,1.10e-13,1;UBERON:0009663,5.87e-08,7;UBERON:0001875,1.99e-07,2;UBERON:0006514,1.99e-07,2;UBERON:0003566,2.40e-07,2;UBERON:0001777,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,2.79142004129816,2.99100968991981,0,0,0,0,0,0,0,2.70121541726101,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0.329851300186716,0.199463657621632,0.426224750532694,1.16083695451434,1.13477044938228,0.622822248995575,0.251248665256743,0.521482918420201,0,0.605399502633369,1.84138817993782,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.463721619900307,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,9.35444521504128,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.943615861729479,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,23.396974530859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0.573409195690071,0.665574309221114,0.807253238237985,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,3.11776494143022,3.18875616752071,0.817826971279221,0,0,0,0.19998739585493,0,2.58322469491223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.41023272848151,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.543757863814654,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,25.8847593845566,0,0,0,0,0,1.86341458096887,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.724030971033267,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p5@RFFL | |||
}} |
Revision as of 14:43, 20 January 2014
Short description: | p5@RFFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RFFL_5end |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | -56bp_to_uc010cti.1_5end |
EntrezGene: | RFFL |
HGNC: | 24821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.79e-18 | 24 |
pro-B cell | 1.79e-18 | 24 |
leukocyte | 1.30e-11 | 136 |
lymphoid lineage restricted progenitor cell | 2.85e-11 | 52 |
Langerhans cell | 4.33e-11 | 5 |
lymphocyte | 4.77e-11 | 53 |
common lymphoid progenitor | 4.77e-11 | 53 |
hematopoietic oligopotent progenitor cell | 1.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-09 | 161 |
nongranular leukocyte | 1.59e-09 | 115 |
hematopoietic stem cell | 4.07e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 4.45e-09 | 120 |
hematopoietic cell | 1.42e-08 | 177 |
keratocyte | 2.40e-07 | 2 |
migratory cranial neural crest cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.10e-13 | 1 |
midbrain nucleus | 1.10e-13 | 1 |
regional part of midbrain | 1.10e-13 | 1 |
midbrain | 1.10e-13 | 1 |
presumptive midbrain | 1.10e-13 | 1 |
midbrain neural tube | 1.10e-13 | 1 |
telencephalic nucleus | 5.87e-08 | 7 |
globus pallidus | 1.99e-07 | 2 |
pallidum | 1.99e-07 | 2 |
head connective tissue | 2.40e-07 | 2 |
substantia propria of cornea | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 9.73e-14 | 1 |
myeloma | 9.73e-14 | 1 |