FFCP PHASE1:Hg19::chr17:19651668..19651682,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=405 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000494157_5end | |||
|coexpression_cluster_id=C742 | |||
|description=CAGE_peak_2_at_ALDH3A1_5end | |||
|id=chr17:19651668..19651682,- | |||
|ontology_enrichment_celltype=CL:0000223!2.26e-22!59;CL:0002076!3.96e-22!43;CL:0000066!1.72e-19!254;CL:0002251!2.55e-12!21;CL:0002368!5.45e-12!13;CL:0002202!6.06e-08!9;CL:0002632!6.06e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.55e-18;42!CL:0002368;2.98e-16;13!CL:0002251;4.20e-14;20!CL:0002202;1.89e-12;9!CL:0002632;1.89e-12;9!CL:0000082;4.41e-09;19!CL:0000307;4.17e-08;3!CL:0002328;6.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.14e-23,42;CL:0000223,4.11e-18,58;CL:0000066,7.09e-17,253;CL:0002368,5.76e-16,13;CL:0002251,3.93e-14,20;CL:0002202,2.60e-12,9;CL:0002632,2.60e-12,9;CL:0000082,5.19e-09,19;CL:0000068,5.01e-08,3;CL:0000069,5.01e-08,3;CL:0000307,5.01e-08,3;CL:0000377,5.01e-08,3;CL:0002328,6.36e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.17e-25;29!CL:0000223;9.66e-10;58!UBERON:0006595;1.71e-08;86!CL:0000377;4.17e-08;3 | |||
|ontology_enrichment_disease=DOID:305!3.80e-20!106;DOID:0050687!3.82e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:0050615;5.96e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.17e-19,106;DOID:0050687,1.71e-11,143;DOID:0050615,6.83e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.97e-35!169;UBERON:0000925!1.97e-35!169;UBERON:0006595!1.97e-35!169;UBERON:0001007!2.28e-33!155;UBERON:0001555!2.28e-33!155;UBERON:0007026!2.28e-33!155;UBERON:0001004!2.27e-29!72;UBERON:0004921!8.36e-29!129;UBERON:0004185!8.36e-29!129;UBERON:0000077!1.29e-26!130;UBERON:0001041!3.47e-25!98;UBERON:0000065!1.78e-22!53;UBERON:0008947!4.86e-21!38;UBERON:0003258!4.86e-21!38;UBERON:0000072!1.76e-17!46;UBERON:0001737!4.81e-13!9;UBERON:0000481!2.53e-12!347;UBERON:0005178!7.15e-12!34;UBERON:0002224!7.15e-12!34;UBERON:0005911!1.21e-11!82;UBERON:0005181!2.30e-11!35;UBERON:0003104!3.00e-11!238;UBERON:0009142!3.00e-11!238;UBERON:0000161!3.71e-11!35;UBERON:0000166!8.88e-10!21;UBERON:0000063!1.29e-09!97;UBERON:0001557!2.32e-09!19;UBERON:0005153!4.88e-09!37;UBERON:0000466!7.18e-09!126;UBERON:0000062!9.37e-09!511;UBERON:0003102!9.99e-09!95;UBERON:0001048!1.96e-08!168;UBERON:0005177!4.40e-08!107;UBERON:0005157!1.07e-07!51;UBERON:0002048!1.09e-07!22;UBERON:0000117!1.09e-07!22;UBERON:0000171!1.09e-07!22;UBERON:0000170!1.09e-07!22;UBERON:0005597!1.09e-07!22;UBERON:0000118!1.09e-07!22;UBERON:0007196!1.31e-07!14;UBERON:0001558!1.31e-07!14;UBERON:0000165!1.37e-07!28;UBERON:0000930!1.37e-07!28;UBERON:0000464!1.59e-07!104;UBERON:0000475!3.09e-07!365;UBERON:0002075!4.21e-07!18;UBERON:0002294!7.54e-07!7;UBERON:0001173!7.54e-07!7;UBERON:0004912!7.54e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;9.17e-26;44!UBERON:0000072;1.78e-23;37!UBERON:0001737;1.17e-19;9!UBERON:0001557;1.17e-19;9!UBERON:0005178;1.09e-16;34!UBERON:0002224;1.09e-16;34!UBERON:0005181;1.53e-15;35!UBERON:0001004;1.78e-14;65!UBERON:0007196;1.94e-11;15!UBERON:0001558;1.94e-11;15!UBERON:0002048;2.82e-11;22!UBERON:0000117;2.82e-11;22!UBERON:0000171;2.82e-11;22!UBERON:0000170;2.82e-11;22!UBERON:0004807;4.33e-11;22!UBERON:0004802;4.41e-09;19!UBERON:0000115;4.41e-09;19!UBERON:0005911;1.14e-08;36!UBERON:0003126;1.59e-08;7!UBERON:0001005;1.59e-08;7!UBERON:0000485;3.20e-08;7!UBERON:0004815;6.12e-08;3!UBERON:0002031;6.12e-08;3!UBERON:0001041;2.02e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,6.87e-38,74;UBERON:0000065,6.41e-34,54;UBERON:0008947,4.92e-33,38;UBERON:0003258,4.92e-33,38;UBERON:0000072,9.38e-28,47;UBERON:0001041,9.69e-28,87;UBERON:0004119,4.73e-27,160;UBERON:0000925,4.73e-27,160;UBERON:0006595,4.73e-27,160;UBERON:0001007,7.63e-26,145;UBERON:0001555,7.63e-26,145;UBERON:0007026,7.63e-26,145;UBERON:0004921,1.38e-22,118;UBERON:0001737,5.40e-20,9;UBERON:0005178,9.88e-19,34;UBERON:0002224,9.88e-19,34;UBERON:0005181,4.72e-18,35;UBERON:0001557,1.93e-15,19;UBERON:0007196,2.50e-11,15;UBERON:0001558,2.50e-11,15;UBERON:0002048,3.30e-11,22;UBERON:0000117,3.30e-11,22;UBERON:0000171,3.30e-11,22;UBERON:0000170,3.30e-11,22;UBERON:0005597,3.30e-11,22;UBERON:0000118,3.30e-11,22;UBERON:0000915,1.42e-10,52;UBERON:0011216,5.94e-10,223;UBERON:0004802,5.19e-09,19;UBERON:0000115,5.19e-09,19;UBERON:0003126,1.84e-08,7;UBERON:0001005,1.84e-08,7;UBERON:0000166,2.33e-08,22;UBERON:0005177,2.93e-08,101;UBERON:0004807,4.21e-08,28;UBERON:0004815,6.36e-08,3;UBERON:0002031,6.36e-08,3;UBERON:0005157,6.83e-08,47;UBERON:0000165,3.83e-07,29;UBERON:0000930,3.83e-07,29;UBERON:0005911,4.08e-07,82;UBERON:0001048,7.54e-07,160;UBERON:0005153,1.00e-06,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.10402800032079,1.98838425436749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,2.10844143144775,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.73815822752988,0,0,0,0,0,0.72038491523742,6.19301990097322,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,5.23312862571041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,1.13658359293342,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.184099797284599,0.80823028409406,0,0.10075209822764,0,1.35282597214308,0.818238361772504,1.14721838155602,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,3.19428360107579,3.54027849164014,2.6511213287183,4.52205288202815,1.74303555273925,1.89816495288877,3.23595139584395,3.92442930250692,1.53898862778556,0,0,0,0,0,0,0,0,1.10689594688802,0,0.439001141634502,2.24803506515239,0,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0.802025881213139,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,2.31398881505369,1.15314040419064,0.382838137483752,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,3.1753297199419,6.70302275535787,2.17781969722645,0,0.86101074534246,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,8.57640755933611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.552567831062295,0,0.102268682502155,0.123084805461069,0,0.179736702294654,31.3287055682316,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,27.7656013816619,2.03402920234213,1.18193840883968,0,0,0,0,0,0,0,0,0.219385397153973,1.74301541630384,9.75966209950223,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54435528581093,0,0.995261931078505,0,0,0,0,0,0.404406797884062,0,0,0,9.00057247087613,0,0,0,0,0,0,0,6.64653872707185,0.661983911750998,2.82539626566503,1.19472429772959,0,0,0,12.445034471626,0,0,0,3.09620260125072,2.33885814675794,2.21711734043665,4.84945082442097,0,1.12990370390266,0,0,0,3.91102765469606,0.561111741760736,1.28071796843612,0,3.16998917739033,0,0,0.432164393964449,0,5.42096279618629,0,0,4.48792157599816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.404421263125109,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0,0,21.467820006353,0,0,0,8.60579228797655,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,33.8751939010972,73.3007623209339,1.38823636338003,0,3.31391244277756,0,0,0,0,0,0,0,0,10.6796785450159,0,0,0,1.14681839138014,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,1.258915569475,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,0,0.0642292250964595,0,0,0,0,0,0,0,0,7.3141228475599,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0.739280431085226,0,0,0,0,0,0,1.98484471355718,0,12.6484803363199,0,0,0,0,0,0,2.05785611324902,0,0.0657727735628491,0,0.444925607568277,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,1.45051314914126,2.56077715640925,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,2.84635677484205,8.65617267374113,0,0,0,0.971421986118279,0,0,0,24.5092998024543,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,34.1038022736806,0,0,2.19100916473955,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75731751132648,0,0,0,0,0,0,5.44291869742403,1.36893320434112,3.63701086278773,5.23572099366537,1.33064142618405,0.0814032686109745,0,0,0.449126010532934,2.34640942403454,0,0,0,0,0 | |||
|short_description=p2@ALDH3A1 | |||
}} |
Revision as of 14:14, 20 January 2014
Short description: | p2@ALDH3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALDH3A1_5end |
Coexpression cluster: | C742_lung_gastric_trachea_bile_esophagus_gall_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000494157_5end |
EntrezGene: | ALDH3A1 |
HGNC: | 405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.14e-23 | 42 |
endodermal cell | 4.11e-18 | 58 |
epithelial cell | 7.09e-17 | 253 |
respiratory epithelial cell | 5.76e-16 | 13 |
epithelial cell of alimentary canal | 3.93e-14 | 20 |
epithelial cell of tracheobronchial tree | 2.60e-12 | 9 |
epithelial cell of lower respiratory tract | 2.60e-12 | 9 |
epithelial cell of lung | 5.19e-09 | 19 |
duct epithelial cell | 5.01e-08 | 3 |
branched duct epithelial cell | 5.01e-08 | 3 |
tracheal epithelial cell | 5.01e-08 | 3 |
tracheoblast | 5.01e-08 | 3 |
bronchial epithelial cell | 6.36e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.17e-19 | 106 |
cell type cancer | 1.71e-11 | 143 |
respiratory system cancer | 6.83e-07 | 16 |