FFCP PHASE1:Hg19::chr16:55519541..55519560,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55519541..55519560,+ | |||
|id=chr16:55519541..55519560,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.41e-40!180;CL:0000680!5.35e-20!57;CL:0000056!5.35e-20!57;CL:0000355!5.35e-20!57;CL:0000057!1.18e-19!75;CL:0000183!6.20e-19!59;CL:0000187!1.53e-18!54;CL:0000393!1.64e-17!60;CL:0000211!1.64e-17!60;CL:0000192!4.13e-17!42;CL:0000514!4.13e-17!42;CL:0000359!3.59e-13!32;CL:0000222!5.26e-12!119;CL:0002371!4.73e-11!591;CL:0000048!5.01e-10!430;CL:0000144!1.11e-09!625;CL:0000723!1.76e-09!436;CL:0000034!1.94e-09!444;CL:0002620!8.54e-09!23;CL:0002334!3.90e-08!12;CL:0000220!1.49e-07!246;CL:0002321!1.74e-07!248;CL:0002539!4.31e-07!10;CL:0000499!5.78e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000192;8.72e-14;43!CL:0000359;4.16e-13;32!CL:0000134;1.60e-11;55!CL:0002334;1.15e-10;12!CL:0000723;1.43e-10;61!CL:0000048;1.82e-10;58!CL:0002539;1.93e-09;10!CL:0002620;1.30e-08;23!CL:0000187;2.29e-08;55!CL:0002320;3.95e-08;188!CL:0000034;8.64e-08;69!CL:0000499;1.92e-07;28!CL:0000057;7.79e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.27e-19,76;CL:0000048,2.98e-19,427;CL:0000192,8.66e-19,43;CL:0000514,8.66e-19,43;CL:0000723,2.44e-18,433;CL:0000680,9.98e-18,58;CL:0000056,9.98e-18,58;CL:0000355,9.98e-18,58;CL:0000034,3.61e-17,441;CL:0000187,6.68e-16,55;CL:0000393,4.18e-13,61;CL:0000211,4.18e-13,61;CL:0000359,4.79e-13,32;CL:0002334,7.10e-11,12;CL:0002320,5.45e-10,361;CL:0002539,2.11e-09,10;CL:0002620,6.71e-09,23;CL:0000134,3.65e-08,354;CL:0000499,1.81e-07,28;CL:0000136,2.62e-07,15;CL:0000222,5.36e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;8.72e-14;43!CL:0000355;6.26e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!4.03e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.10e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.32e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.01e-22!83;UBERON:0002329!4.01e-22!83;UBERON:0003077!4.01e-22!83;UBERON:0003059!4.01e-22!83;UBERON:0007282!4.01e-22!83;UBERON:0009618!4.01e-22!83;UBERON:0007285!4.01e-22!83;UBERON:0000486!8.06e-22!82;UBERON:0004290!8.32e-22!70;UBERON:0002385!5.05e-20!63;UBERON:0001015!5.05e-20!63;UBERON:0000383!5.05e-20!63;UBERON:0001134!5.77e-20!61;UBERON:0002036!5.77e-20!61;UBERON:0003082!5.77e-20!61;UBERON:0001637!1.14e-16!42;UBERON:0003509!1.14e-16!42;UBERON:0004572!1.14e-16!42;UBERON:0001981!3.30e-16!60;UBERON:0007500!3.30e-16!60;UBERON:0004537!3.30e-16!60;UBERON:0006965!3.30e-16!60;UBERON:0004872!1.23e-15!84;UBERON:0005256!1.93e-15!143;UBERON:0002049!3.51e-14!79;UBERON:0007798!3.51e-14!79;UBERON:0004573!9.68e-14!33;UBERON:0004571!9.68e-14!33;UBERON:0000055!3.93e-13!69;UBERON:0000490!2.75e-12!138;UBERON:0003914!1.01e-10!118;UBERON:0004535!1.30e-10!110;UBERON:0002100!1.98e-10!216;UBERON:0000947!2.06e-10!21;UBERON:0010191!2.06e-10!21;UBERON:0001009!3.08e-10!113;UBERON:0003102!5.70e-10!95;UBERON:0002199!1.69e-09!45;UBERON:0002416!1.69e-09!45;UBERON:0001135!2.94e-08!15;UBERON:0000475!4.96e-08!365;UBERON:0000468!5.00e-08!659;UBERON:0001013!5.56e-08!14;UBERON:0002097!1.84e-07!40;UBERON:0004237!4.31e-07!10;UBERON:0004695!4.31e-07!10;UBERON:0002111!4.31e-07!10;UBERON:0004178!4.31e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.88e-12;33!UBERON:0004571;4.88e-12;33!UBERON:0001637;9.65e-11;42!UBERON:0003509;9.65e-11;42!UBERON:0004572;9.65e-11;42!UBERON:0001135;1.61e-10;15!UBERON:0000947;2.17e-10;21!UBERON:0010191;2.17e-10;21!UBERON:0002385;2.27e-10;31!UBERON:0001015;2.27e-10;31!UBERON:0000383;2.27e-10;31!UBERON:0004237;1.93e-09;10!UBERON:0004695;1.93e-09;10!UBERON:0002111;1.93e-09;10!UBERON:0004178;1.93e-09;10!UBERON:0002384;4.96e-09;198!UBERON:0001013;1.85e-08;14!UBERON:0004457;1.20e-07;9!UBERON:0000042;1.20e-07;9!UBERON:0002199;5.96e-07;46!UBERON:0002416;5.96e-07;46!UBERON:0003688;9.24e-07;6!UBERON:0002358;9.24e-07;6!UBERON:0003684;9.24e-07;6!UBERON:0001178;9.24e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,8.69e-19,73;UBERON:0002329,1.54e-18,71;UBERON:0003059,1.54e-18,71;UBERON:0007282,1.54e-18,71;UBERON:0004290,1.54e-18,71;UBERON:0009618,1.54e-18,71;UBERON:0000486,3.10e-18,83;UBERON:0003077,4.66e-18,72;UBERON:0007285,4.66e-18,72;UBERON:0001134,1.23e-17,62;UBERON:0002036,1.23e-17,62;UBERON:0003082,1.23e-17,62;UBERON:0002385,1.88e-17,64;UBERON:0001015,1.88e-17,64;UBERON:0000383,1.88e-17,64;UBERON:0007503,5.98e-17,78;UBERON:0001637,9.07e-15,42;UBERON:0003509,9.07e-15,42;UBERON:0004572,9.07e-15,42;UBERON:0004573,4.22e-13,33;UBERON:0004571,4.22e-13,33;UBERON:0005256,5.32e-13,122;UBERON:0000926,2.36e-12,315;UBERON:0004120,2.36e-12,315;UBERON:0006603,2.36e-12,315;UBERON:0003104,3.84e-11,160;UBERON:0009142,3.84e-11,160;UBERON:0001135,1.82e-10,15;UBERON:0002199,1.86e-10,46;UBERON:0002416,1.86e-10,46;UBERON:0000947,2.09e-10,21;UBERON:0010191,2.09e-10,21;UBERON:0002384,4.63e-10,371;UBERON:0007500,9.94e-10,59;UBERON:0001981,9.94e-10,59;UBERON:0004537,9.94e-10,59;UBERON:0006965,9.94e-10,59;UBERON:0004872,1.33e-09,83;UBERON:0004237,2.11e-09,10;UBERON:0004695,2.11e-09,10;UBERON:0002111,2.11e-09,10;UBERON:0004178,2.11e-09,10;UBERON:0000490,1.07e-08,148;UBERON:0001013,1.09e-08,14;UBERON:0003102,1.40e-08,99;UBERON:0002100,5.38e-08,199;UBERON:0002097,8.06e-08,41;UBERON:0000055,3.50e-07,68;UBERON:0003914,6.14e-07,117;UBERON:0003688,7.82e-07,6;UBERON:0002358,7.82e-07,6;UBERON:0003684,7.82e-07,6;UBERON:0001178,7.82e-07,6 | |||
|phase1_expression=8.17552706717505,16.2716398157147,3.80576891059122,11.0080628188443,22.3480547213644,15.7020934338066,2.53299878168311,1.89515962028049,9.14149698699435,0,0,0.436882744260345,0.263766978228454,1.36142988256051,3.97676850873499,33.6162573225888,13.2592796165275,20.4486825308465,14.6379839637152,0.984968464614303,1.83600622119828,0.313454721478088,0.572471974262113,1.23186982565596,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.80719576192283,1.50401373190767,3.18662341713812,0.795285947051099,10.2193322763554,0.661743720148475,0.886917589850256,0.527008714158756,0.392937226493138,0,0,0,0,0,0,0,0,0.596287222100115,2.58070378531837,0.694281003215189,0.56530794192401,1.67799774483962,3.30141650328081,0.835979866147242,0,0,0,0.402829317109147,0,1.22031028774085,0.367663080345869,4.0507097394088,0.803697554556718,0.44905874525234,0.337834441449967,0,0.949265659568129,2.5648244150257,0,0,0,4.47274756525787,6.96467814155189,3.44263870114369,23.8074395221515,3.54668382198357,2.24271040056923,0,4.44001587150888,1.24484414159907,2.2900814251847,2.45192854670188,0.302714855289863,0.576175924479999,0,2.49728061464256,0,1.94283284717341,0.23486899728753,0.971237666208789,0.561803226808994,1.02077085627447,0.737005903870608,2.78979609174567,5.94001428641027,20.0286212715631,0.910161361938026,0.718618141816238,0.336672227908132,0.625592599359821,0,0.438977620880838,9.80760946556863,10.5166641234618,0.340296549480063,1.79389635688862,4.91181994282705,1.90738711043606,5.70173082560364,7.31672957592916,2.31876486041066,2.23340227597908,4.55696097051419,5.16416127354353,4.54380793639406,4.60249493211497,4.84938170456436,6.03516307278244,2.82105875037393,1.86516651541536,0.193260853163297,0.272746120590835,0,0.487894824518382,0,0.232387885739037,0.207322110030741,0.252320850875628,0,7.8224766164908,26.3728784659083,1.38134921352481,9.28735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,4.41026134156626,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,3.11980435583874,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0.445893486866185,0,0.671928512795438,0,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0.190493682876507,0,0,0,0.616964956219941,0,0.571652865261156,0.224262168690721,0.43596006883328,0.07333828582095,5.17086863031111,3.57656445851882,0.845302752556,5.58470044828228,3.12022310734098,0.257207374262142,0,0.266422179016099,2.14466990487221,7.05408087008876,1.64648067356154,0.325736184293735,0.710783897485092,0.791951872933429,1.20575750823834,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,4.05387658669222,11.5066740628215,1.43248770591916,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,1.34960640891054,3.50119364741774,1.35632511849868,2.49565033836969,22.1251946108481,3.46945313074656,1.28855556491985,1.20378439891088,9.09630016223939,8.27784570340039,0,1.29058417979192,3.12781012085098,3.91602314925481,5.83343820478455,0,0,0,0,0,0.30239029332968,6.20269519546942,3.99001130548962,23.5754479323782,4.61300937320523,4.60536524160033,8.5252578206112,2.96836132889982,4.62629081407967,4.6166048581413,1.47828880824856,7.2695620085707,7.08883308605751,0,4.0101294060657,0.0920809889358963,4.59257792658427,6.00900854422166,6.03172308813351,0,0,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0,0.976135183992909,1.44257416306811,0.640986253728404,0.330037999682352,0,0.650060246036521,0,3.28680442193215,0.462145851343933,0.921022048356777,0.827019434907183,2.25582514223375,3.0453505721988,0.852266274161009,0.979352392114111,0.495854746082934,0.384380134730212,0,0,3.253918845081,13.5369309137175,2.7881490806424,3.08033580176089,2.12922412126809,1.73986598415015,4.633105477598,0.572499546967965,1.116475108079,3.16379424718726,1.33441135746677,1.02359116524534,1.28381696410176,0.318203247925937,3.92474320099615,2.51821440616641,6.58888871366531,2.82749765629647,0.808729926293264,1.58510321173008,7.58265221230166,1.46290121726877,6.58026422004468,10.5650146756755,1.50149902548784,6.50464986987079,9.04064932961942,0,5.30751180192976,2.63070531152258,2.31510213706675,2.62357900818653,0.811641507850816,3.40805847909725,3.3803472303869,0.286822704408103,0.88424136911809,2.85336841185,3.90237170477658,10.5553817648832,32.6001944030303,0,0.349934720244983,0,0,0,0.282431402330337,1.72202149068492,0,3.10401107475673,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0.140669416410513,0.667852230137435,0,0,1.59398390600856,0.276283915531148,0,1.1249555075237,0,4.3545542272653,0,0,0,1.28236427328014,0,0,0,0,0,0,0,3.62499787717397,0.227586896570999,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p@chr16:55519541..55519560,+ | |||
}} |
Revision as of 03:38, 12 January 2014
Short description: | p@chr16:55519541..55519560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr16:55519541..55519560, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.27e-19 | 76 |
multi fate stem cell | 2.98e-19 | 427 |
smooth muscle cell | 8.66e-19 | 43 |
smooth muscle myoblast | 8.66e-19 | 43 |
somatic stem cell | 2.44e-18 | 433 |
muscle precursor cell | 9.98e-18 | 58 |
myoblast | 9.98e-18 | 58 |
multi-potent skeletal muscle stem cell | 9.98e-18 | 58 |
stem cell | 3.61e-17 | 441 |
muscle cell | 6.68e-16 | 55 |
electrically responsive cell | 4.18e-13 | 61 |
electrically active cell | 4.18e-13 | 61 |
vascular associated smooth muscle cell | 4.79e-13 | 32 |
preadipocyte | 7.10e-11 | 12 |
connective tissue cell | 5.45e-10 | 361 |
aortic smooth muscle cell | 2.11e-09 | 10 |
skin fibroblast | 6.71e-09 | 23 |
mesenchymal cell | 3.65e-08 | 354 |
stromal cell | 1.81e-07 | 28 |
fat cell | 2.62e-07 | 15 |
mesodermal cell | 5.36e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.32e-11 | 14 |