FFCP PHASE1:Hg19::chr16:48421151..48421159,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr16:48421151..48421159,- | |||
|id=chr16:48421151..48421159,- | |||
|ontology_enrichment_celltype=CL:0000039!9.13e-13!7;CL:0000586!9.13e-13!7 | |||
|ontology_enrichment_celltype_v019=CL:0002586;8.00e-18;3!CL:0000149;1.00e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,8.00e-18,3;CL:0000149,1.00e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.46e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!3.53e-29!3;UBERON:0005290!3.53e-29!3;UBERON:0010096!3.53e-29!3;UBERON:0002360!8.72e-20!2;UBERON:0000094!8.72e-20!2;UBERON:0007645!8.72e-20!2;UBERON:0002298!2.48e-11!8;UBERON:0000473!3.07e-11!8;UBERON:0002363!1.61e-10!1;UBERON:0007647!1.61e-10!1;UBERON:0010115!1.61e-10!1;UBERON:0000966!7.43e-09!5;UBERON:0005388!7.43e-09!5;UBERON:0001802!7.43e-09!5;UBERON:0003135!2.58e-08!11;UBERON:0004733!1.01e-07!12;UBERON:0002028!1.01e-07!12;UBERON:0007277!1.01e-07!12;UBERON:0005743!1.36e-07!86;UBERON:0004732!3.65e-07!13;UBERON:0000073!8.98e-07!94;UBERON:0001016!8.98e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.71e-40;5!UBERON:0005388;2.71e-40;5!UBERON:0001802;2.71e-40;5!UBERON:0000970;4.95e-23;20!UBERON:0002104;5.49e-22;21!UBERON:0000020;3.62e-20;23!UBERON:0001032;2.27e-19;24!UBERON:0004456;2.27e-19;24!UBERON:0001781;8.00e-18;3!UBERON:0001782;8.00e-18;3!UBERON:0000019;1.72e-11;19!UBERON:0000047;1.72e-11;19!UBERON:0004088;1.72e-11;19!UBERON:0010230;1.72e-11;19!UBERON:0001456;1.69e-10;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,8.35e-34,6;UBERON:0005388,8.35e-34,6;UBERON:0001802,8.35e-34,6;UBERON:0000970,5.49e-22,21;UBERON:0002104,5.49e-22,21;UBERON:0000020,2.27e-19,24;UBERON:0001032,2.27e-19,24;UBERON:0004456,2.27e-19,24;UBERON:0001782,8.00e-18,3;UBERON:0005424,8.00e-18,3;UBERON:0001781,1.00e-13,4;UBERON:0000019,5.70e-11,20;UBERON:0000047,5.70e-11,20;UBERON:0010312,5.70e-11,20;UBERON:0004088,5.70e-11,20;UBERON:0010230,5.70e-11,20;UBERON:0003072,5.70e-11,20;UBERON:0004128,5.70e-11,20;UBERON:0003071,5.70e-11,20;UBERON:0001456,4.53e-10,22;UBERON:0005085,1.92e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55529752530024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,0.0620964029413835,10.0994503503448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,3.4308741204795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:48421151..48421159,- | |||
}} |
Revision as of 03:27, 12 January 2014
Short description: | p@chr16:48421151..48421159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:48421151..48421159, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 8.00e-18 | 3 |
visual pigment cell | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
retina | 8.35e-34 | 6 |
photoreceptor array | 8.35e-34 | 6 |
posterior segment of eyeball | 8.35e-34 | 6 |
eye | 5.49e-22 | 21 |
visual system | 5.49e-22 | 21 |
sense organ | 2.27e-19 | 24 |
sensory system | 2.27e-19 | 24 |
entire sense organ system | 2.27e-19 | 24 |
pigmented layer of retina | 8.00e-18 | 3 |
presumptive retinal pigmented epithelium | 8.00e-18 | 3 |
layer of retina | 1.00e-13 | 4 |
camera-type eye | 5.70e-11 | 20 |
simple eye | 5.70e-11 | 20 |
immature eye | 5.70e-11 | 20 |
ocular region | 5.70e-11 | 20 |
eyeball of camera-type eye | 5.70e-11 | 20 |
optic cup | 5.70e-11 | 20 |
optic vesicle | 5.70e-11 | 20 |
eye primordium | 5.70e-11 | 20 |
face | 4.53e-10 | 22 |
ectodermal placode | 1.92e-07 | 31 |