FFCP PHASE1:Hg19::chr16:18801619..18801630,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6210 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10389 | |||
|TSSclassifier=strong | |||
|UniProt=P62244,B2R4W8 | |||
|association_with_transcript=25bp_to_ENST00000322989,NM_001019,uc002dfh.1_5end | |||
|coexpression_cluster_id=C3538 | |||
|description=CAGE_peak_2_at_RPS15A_5end | |||
|id=chr16:18801619..18801630,- | |||
|ontology_enrichment_celltype=CL:0000548!8.55e-39!679;CL:0000004!8.55e-39!679;CL:0000255!8.55e-39!679;CL:0000012!1.16e-38!682;CL:0002321!7.62e-27!248;CL:0000220!5.99e-26!246;CL:0000003!2.20e-24!722;CL:0000066!1.33e-23!254;CL:0000144!1.59e-23!625;CL:0002371!2.91e-15!591;CL:0000222!1.39e-14!119;CL:0000055!2.47e-13!180;CL:0000063!8.72e-13!578;CL:0000393!1.06e-10!60;CL:0000211!1.06e-10!60;CL:0000183!8.05e-10!59;CL:0000680!1.91e-09!57;CL:0000056!1.91e-09!57;CL:0000355!1.91e-09!57;CL:0000187!5.17e-09!54;CL:0000076!1.69e-08!62;CL:0000192!2.01e-07!42;CL:0000514!2.01e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.79e-27,250;CL:0000066,5.14e-24,253;CL:0000222,1.86e-14,121;CL:0000393,3.38e-10,61;CL:0000211,3.38e-10,61;CL:0000680,5.71e-09,58;CL:0000056,5.71e-09,58;CL:0000355,5.71e-09,58;CL:0000187,1.54e-08,55;CL:0000076,1.97e-08,63;CL:0000192,6.44e-07,43;CL:0000514,6.44e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.74e-22!235;DOID:14566!2.09e-22!239;DOID:0050686!2.12e-11!137;DOID:305!5.04e-10!106;DOID:0050687!7.62e-10!143;DOID:2531!3.99e-08!51;DOID:0060083!3.99e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.72e-22,235;DOID:14566,2.06e-22,239;DOID:0050686,2.11e-11,137;DOID:305,5.02e-10,106;DOID:0050687,7.58e-10,143;DOID:2531,3.97e-08,51;DOID:0060083,3.97e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.71e-10!238;UBERON:0009142!1.71e-10!238;UBERON:0005256!5.65e-10!143;UBERON:0000486!2.76e-09!82;UBERON:0000490!2.89e-09!138;UBERON:0000914!4.02e-09!83;UBERON:0002329!4.02e-09!83;UBERON:0003077!4.02e-09!83;UBERON:0003059!4.02e-09!83;UBERON:0007282!4.02e-09!83;UBERON:0009618!4.02e-09!83;UBERON:0007285!4.02e-09!83;UBERON:0004290!4.63e-09!70;UBERON:0002100!4.93e-09!216;UBERON:0001134!5.85e-08!61;UBERON:0002036!5.85e-08!61;UBERON:0003082!5.85e-08!61;UBERON:0003914!2.68e-07!118;UBERON:0002049!4.84e-07!79;UBERON:0007798!4.84e-07!79;UBERON:0002385!5.62e-07!63;UBERON:0001015!5.62e-07!63;UBERON:0000383!5.62e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.75e-10,78;UBERON:0000490,4.56e-10,148;UBERON:0002100,1.47e-09,199;UBERON:0000486,6.80e-09,83;UBERON:0002329,1.22e-08,71;UBERON:0003059,1.22e-08,71;UBERON:0007282,1.22e-08,71;UBERON:0004290,1.22e-08,71;UBERON:0009618,1.22e-08,71;UBERON:0003104,2.26e-08,160;UBERON:0009142,2.26e-08,160;UBERON:0005256,2.28e-08,122;UBERON:0003077,2.34e-08,72;UBERON:0007285,2.34e-08,72;UBERON:0007524,2.94e-08,73;UBERON:0003914,1.40e-07,117;UBERON:0001134,1.52e-07,62;UBERON:0002036,1.52e-07,62;UBERON:0003082,1.52e-07,62;UBERON:0002049,2.88e-07,78;UBERON:0007798,2.88e-07,78 | |||
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| |||
|short_description=p2@RPS15A | |||
}} |
Revision as of 02:36, 12 January 2014
Short description: | p2@RPS15A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS15A_5end |
Coexpression cluster: | C3538_iPS_Mallassezderived_Bronchial_HES3GFP_acute_chronic_hepatocellular |
Association with transcript: | 25bp_to_ENST00000322989, NM_001019, uc002dfh.1_5end |
EntrezGene: | RPS15A |
HGNC: | 10389 |
UniProt: | P62244B2R4W8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.79e-27 | 250 |
epithelial cell | 5.14e-24 | 253 |
mesodermal cell | 1.86e-14 | 121 |
electrically responsive cell | 3.38e-10 | 61 |
electrically active cell | 3.38e-10 | 61 |
muscle precursor cell | 5.71e-09 | 58 |
myoblast | 5.71e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.71e-09 | 58 |
muscle cell | 1.54e-08 | 55 |
squamous epithelial cell | 1.97e-08 | 63 |
smooth muscle cell | 6.44e-07 | 43 |
smooth muscle myoblast | 6.44e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.75e-10 | 78 |
unilaminar epithelium | 4.56e-10 | 148 |
trunk | 1.47e-09 | 199 |
multilaminar epithelium | 6.80e-09 | 83 |
somite | 1.22e-08 | 71 |
presomitic mesoderm | 1.22e-08 | 71 |
presumptive segmental plate | 1.22e-08 | 71 |
dermomyotome | 1.22e-08 | 71 |
trunk paraxial mesoderm | 1.22e-08 | 71 |
mesenchyme | 2.26e-08 | 160 |
entire embryonic mesenchyme | 2.26e-08 | 160 |
trunk mesenchyme | 2.28e-08 | 122 |
paraxial mesoderm | 2.34e-08 | 72 |
presumptive paraxial mesoderm | 2.34e-08 | 72 |
dense mesenchyme tissue | 2.94e-08 | 73 |
epithelial tube | 1.40e-07 | 117 |
skeletal muscle tissue | 1.52e-07 | 62 |
striated muscle tissue | 1.52e-07 | 62 |
myotome | 1.52e-07 | 62 |
vasculature | 2.88e-07 | 78 |
vascular system | 2.88e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.72e-22 | 235 |
disease of cellular proliferation | 2.06e-22 | 239 |
organ system cancer | 2.11e-11 | 137 |
carcinoma | 5.02e-10 | 106 |
cell type cancer | 7.58e-10 | 143 |
hematologic cancer | 3.97e-08 | 51 |
immune system cancer | 3.97e-08 | 51 |