FFCP PHASE1:Hg19::chr15:85147104..85147119,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20994 | |||
|TSSclassifier=strong | |||
|UniProt=F5GY18,F5H3F3,F5GZ04 | |||
|association_with_transcript=-12bp_to_ENST00000485222,ENST00000538076,ENST00000540894,ENST00000541040_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_6_at_ZSCAN2_5end | |||
|id=chr15:85147104..85147119,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.46e-33!5;CL:0000039!9.23e-16!7;CL:0000586!9.23e-16!7;CL:0000540!8.86e-11!6;CL:0000031!8.86e-11!6;CL:0000404!8.86e-11!6;CL:0000047!3.40e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.02e-81;5!CL:0000039;4.30e-38;7!CL:0000586;4.30e-38;7!CL:0002321;2.34e-27;15!CL:0000540;1.19e-25;6!CL:0000404;1.19e-25;6!CL:0000148;2.34e-15;10!CL:0000147;3.73e-11;14!CL:0000710;5.55e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.12e-81,5;CL:0000039,4.11e-38,7;CL:0000586,4.11e-38,7;CL:0000540,1.67e-25,6;CL:0000031,1.67e-25,6;CL:0000404,1.67e-25,6;CL:0000047,2.57e-19,8;CL:0000148,2.34e-15,10;CL:0000541,2.34e-15,10;CL:0000147,3.73e-11,14;CL:0000133,1.50e-09,59;CL:0000710,5.55e-08,20;CL:0000221,7.89e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.02e-27;10!UBERON:0005564;8.02e-27;10!CL:0000031;1.19e-25;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.07e-12;22!DOID:2994;2.07e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.04e-12,22;DOID:2994,2.04e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.25e-14!8;UBERON:0003101!2.69e-10!22;UBERON:0000079!2.69e-10!22;UBERON:0003135!4.48e-10!11;UBERON:0000991!9.14e-08!21;UBERON:0009196!9.14e-08!21;UBERON:0009117!9.14e-08!21;UBERON:0005564!9.14e-08!21;UBERON:0004176!2.12e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.12e-33;8!UBERON:0003135;1.99e-24;11!UBERON:0000922;1.44e-16;49!UBERON:0000991;5.51e-13;21!UBERON:0003101;2.07e-12;22!UBERON:0000079;2.07e-12;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.04e-33,8;UBERON:0003135,1.93e-24,11;UBERON:0000991,5.43e-13,21;UBERON:0009196,5.43e-13,21;UBERON:0009117,5.43e-13,21;UBERON:0005564,5.43e-13,21;UBERON:0004176,2.04e-12,22;UBERON:0003101,2.04e-12,22;UBERON:0000079,2.04e-12,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65921118388786,1.32529768321485,2.67246068599892,1.24393266018445,1.00928340350251,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25054407851027,3.02586760513914,3.32352270423348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,3.56960904096936,2.40495664739004,1.10273879441814,3.50990555009325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ZSCAN2 | |||
}} |
Revision as of 00:58, 12 January 2014
Short description: | p6@ZSCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZSCAN2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -12bp_to_ENST00000485222, ENST00000538076, ENST00000540894, ENST00000541040_5end |
EntrezGene: | ZSCAN2 |
HGNC: | 20994 |
UniProt: | F5GY18F5H3F3F5GZ04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.12e-81 | 5 |
germ line cell | 4.11e-38 | 7 |
germ cell | 4.11e-38 | 7 |
neuron | 1.67e-25 | 6 |
neuroblast | 1.67e-25 | 6 |
electrically signaling cell | 1.67e-25 | 6 |
neuronal stem cell | 2.57e-19 | 8 |
melanocyte | 2.34e-15 | 10 |
melanoblast | 2.34e-15 | 10 |
pigment cell | 3.73e-11 | 14 |
neurectodermal cell | 1.50e-09 | 59 |
neurecto-epithelial cell | 5.55e-08 | 20 |
ectodermal cell | 7.89e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 2.04e-33 | 8 |
male reproductive organ | 1.93e-24 | 11 |
gonad | 5.43e-13 | 21 |
indifferent external genitalia | 5.43e-13 | 21 |
indifferent gonad | 5.43e-13 | 21 |
gonad primordium | 5.43e-13 | 21 |
external genitalia | 2.04e-12 | 22 |
male organism | 2.04e-12 | 22 |
male reproductive system | 2.04e-12 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.04e-12 | 22 |
germ cell cancer | 2.04e-12 | 22 |