FFCP PHASE1:Hg19::chr15:81199054..81199068,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_at_chr15:81199054..81199068,+ | |||
|id=chr15:81199054..81199068,+ | |||
|ontology_enrichment_celltype=CL:0000057!8.19e-24!75;CL:0000055!1.25e-14!180;CL:0002620!8.46e-14!23;CL:0002334!2.75e-13!12;CL:1000306!3.34e-08!4;CL:0002547!3.34e-08!4;CL:0002579!7.57e-08!3;CL:0000135!1.09e-07!3;CL:0000386!1.09e-07!3;CL:0000388!1.09e-07!3;CL:0002580!1.12e-07!3;CL:0002615!1.93e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.09e-23;12!CL:0000136;4.82e-21;13!CL:0002579;5.87e-19;3!CL:0000135;1.86e-18;3!CL:0000388;1.86e-18;3!CL:0002580;2.09e-18;3!CL:0002615;7.77e-18;3!CL:0002617;1.10e-12;2!CL:0000214;1.41e-08;3!CL:0000346;2.64e-08;3!CL:1000428;2.64e-08;3!CL:0000511;2.30e-07;1!CL:0002625;2.30e-07;1!CL:0002581;2.30e-07;1!CL:0000216;2.30e-07;1!CL:0002616;2.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.06e-23,12;CL:0002579,6.42e-19,3;CL:0000135,1.76e-18,3;CL:0000388,1.76e-18,3;CL:0002580,1.87e-18,3;CL:0000136,3.96e-18,15;CL:0002615,8.48e-18,3;CL:0000057,2.56e-16,76;CL:0002617,1.01e-12,2;CL:0000214,1.15e-08,3;CL:0000346,2.64e-08,3;CL:1000428,2.64e-08,3;CL:0000134,5.29e-08,354;CL:0002320,9.81e-08,361;CL:0000511,1.98e-07,1;CL:0002625,1.98e-07,1;CL:0000216,1.98e-07,1;CL:0002581,2.23e-07,1;CL:0002616,2.37e-07,1;CL:0000219,8.61e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;7.72e-07;1!DOID:3369;7.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.45e-07,1;DOID:2513,6.12e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.08e-14!45;UBERON:0002416!5.08e-14!45;UBERON:0003688!1.28e-13!6;UBERON:0002358!1.28e-13!6;UBERON:0003684!1.28e-13!6;UBERON:0001178!1.28e-13!6;UBERON:0002097!3.83e-13!40;UBERON:0004457!4.82e-11!12;UBERON:0000042!4.82e-11!12;UBERON:0000415!3.34e-08!4;UBERON:0007240!3.34e-08!4;UBERON:0005742!3.34e-08!4;UBERON:0005734!3.34e-08!4;UBERON:0004664!3.34e-08!4;UBERON:0004663!3.34e-08!4;UBERON:0003102!4.99e-08!95;UBERON:0000043!1.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.83e-40;9!UBERON:0000042;1.83e-40;9!UBERON:0003688;5.48e-35;6!UBERON:0002358;5.48e-35;6!UBERON:0003684;5.48e-35;6!UBERON:0001178;5.48e-35;6!UBERON:0007846;1.86e-18;3!UBERON:0000043;1.86e-18;3!UBERON:0007845;1.86e-18;3!UBERON:0000310;1.44e-14;10!UBERON:0001443;3.18e-13;11!UBERON:0005406;4.69e-13;2!UBERON:0006915;1.41e-08;3!UBERON:0007616;1.41e-08;3!UBERON:0002217;1.41e-08;3!UBERON:0002018;1.41e-08;3!UBERON:0000412;2.64e-08;3!UBERON:0001992;2.64e-08;3!UBERON:0001136;2.30e-07;1!UBERON:0001343;2.30e-07;1!UBERON:0004910;2.30e-07;1!UBERON:0004813;2.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.55e-35,6;UBERON:0002358,6.55e-35,6;UBERON:0003684,6.55e-35,6;UBERON:0001178,6.55e-35,6;UBERON:0004457,4.17e-30,12;UBERON:0000042,4.17e-30,12;UBERON:0007846,1.76e-18,3;UBERON:0000043,1.76e-18,3;UBERON:0007845,1.76e-18,3;UBERON:0000310,1.30e-14,10;UBERON:0001443,2.91e-13,11;UBERON:0005406,4.70e-13,2;UBERON:0006915,1.15e-08,3;UBERON:0007616,1.15e-08,3;UBERON:0002217,1.15e-08,3;UBERON:0002018,1.15e-08,3;UBERON:0004923,1.60e-08,66;UBERON:0000412,2.64e-08,3;UBERON:0001992,2.64e-08,3;UBERON:0004458,3.16e-08,49;UBERON:0002384,3.53e-08,371;UBERON:0001136,1.98e-07,1;UBERON:0001343,1.98e-07,1;UBERON:0004910,1.98e-07,1;UBERON:0005154,1.98e-07,1;UBERON:0005295,1.98e-07,1;UBERON:0004813,1.98e-07,1;UBERON:0005297,1.98e-07,1;UBERON:0005294,1.98e-07,1;UBERON:0010141,1.98e-07,1;UBERON:0005891,1.98e-07,1 | |||
|phase1_expression=1.45342703416445,6.20891519283851,2.39622486963151,3.00219895059391,1.34088328328186,4.36169262050184,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0.397227542439656,2.29469296599051,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,5.51678032438235,0.901428353439581,0,0.89694817844431,0.427114777637135,0.847727604638247,0,0.206105058476878,0.772921620136887,0.558350568994769,0.337552664482532,0.292311015483596,2.01947019395292,1.01254888506529,2.90962902273861,1.06502877754984,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,2.72918588600655,2.30192959932094,7.57782254969299,5.25370511948374,4.09365799253363,6.91671860917512,4.45254199334973,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.539617372749944,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0,0.424216295861138,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,1.89996871767898,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,2.0125432140206,0,0,1.36107831386915,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,1.389134845943,0,0,0.308801447160972,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,4.62175628631418,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr15:81199054..81199068,+ | |||
}} |
Revision as of 00:52, 12 January 2014
Short description: | p@chr15:81199054..81199068, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81199054..81199068, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.06e-23 | 12 |
omentum preadipocyte | 6.42e-19 | 3 |
fibrocyte | 1.76e-18 | 3 |
tendon cell | 1.76e-18 | 3 |
preadipocyte of the breast | 1.87e-18 | 3 |
fat cell | 3.96e-18 | 15 |
adipocyte of omentum tissue | 8.48e-18 | 3 |
fibroblast | 2.56e-16 | 76 |
adipocyte of breast | 1.01e-12 | 2 |
synovial cell | 1.15e-08 | 3 |
hair follicle dermal papilla cell | 2.64e-08 | 3 |
stem cell of epidermis | 2.64e-08 | 3 |
mesenchymal cell | 5.29e-08 | 354 |
connective tissue cell | 9.81e-08 | 361 |
androgen binding protein secreting cell | 1.98e-07 | 1 |
seminiferous tubule epithelial cell | 1.98e-07 | 1 |
Sertoli cell | 1.98e-07 | 1 |
perirenal preadipocyte | 2.23e-07 | 1 |
perirenal adipocyte cell | 2.37e-07 | 1 |
motile cell | 8.61e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.55e-35 | 6 |
peritoneum | 6.55e-35 | 6 |
abdominal cavity | 6.55e-35 | 6 |
visceral peritoneum | 6.55e-35 | 6 |
cavity lining | 4.17e-30 | 12 |
serous membrane | 4.17e-30 | 12 |
dense regular connective tissue | 1.76e-18 | 3 |
tendon | 1.76e-18 | 3 |
regular connective tissue | 1.76e-18 | 3 |
breast | 1.30e-14 | 10 |
chest | 2.91e-13 | 11 |
perirenal fat | 4.70e-13 | 2 |
stratified squamous epithelium | 1.15e-08 | 3 |
layer of synovial tissue | 1.15e-08 | 3 |
synovial joint | 1.15e-08 | 3 |
synovial membrane of synovial joint | 1.15e-08 | 3 |
organ component layer | 1.60e-08 | 66 |
dermal papilla | 2.64e-08 | 3 |
papillary layer of dermis | 2.64e-08 | 3 |
body cavity or lining | 3.16e-08 | 49 |
connective tissue | 3.53e-08 | 371 |
mesothelium | 1.98e-07 | 1 |
seminiferous tubule of testis | 1.98e-07 | 1 |
epithelium of male gonad | 1.98e-07 | 1 |
epithelial cord | 1.98e-07 | 1 |
sex cord | 1.98e-07 | 1 |
seminiferous tubule epithelium | 1.98e-07 | 1 |
testis sex cord | 1.98e-07 | 1 |
genital ridge | 1.98e-07 | 1 |
primitive sex cord of indifferent gonad | 1.98e-07 | 1 |
coelomic epithelium | 1.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.45e-07 | 1 |
basal cell carcinoma | 6.12e-07 | 1 |