FFCP PHASE1:Hg19::chr15:73661248..73661259,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10021 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16882 | |||
|TSSclassifier=weak | |||
|UniProt=Q9Y3Q4 | |||
|association_with_transcript=345bp_to_ENST00000261917,NM_005477,uc002avp.2_5end | |||
|description=CAGE_peak_5_at_HCN4_5end | |||
|id=chr15:73661248..73661259,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.02e-11;2!CL:0002097;3.02e-11;2!CL:0000174;6.34e-08;3!CL:0002567;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.35e-11,2;CL:0002567,4.84e-08,3;CL:0000174,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;4.22e-21;1!UBERON:0004140;4.22e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-26!82;UBERON:0005743!1.33e-26!86;UBERON:0000073!1.94e-26!94;UBERON:0001016!1.94e-26!94;UBERON:0001049!1.98e-24!57;UBERON:0005068!1.98e-24!57;UBERON:0006241!1.98e-24!57;UBERON:0007135!1.98e-24!57;UBERON:0002616!2.37e-23!59;UBERON:0000955!2.52e-23!69;UBERON:0006238!2.52e-23!69;UBERON:0003075!1.98e-22!86;UBERON:0007284!1.98e-22!86;UBERON:0007023!3.84e-21!115;UBERON:0002346!4.99e-21!90;UBERON:0002780!2.17e-19!41;UBERON:0001890!2.17e-19!41;UBERON:0006240!2.17e-19!41;UBERON:0003080!8.36e-19!42;UBERON:0002619!1.41e-14!22;UBERON:0004121!4.16e-14!169;UBERON:0003056!6.16e-14!61;UBERON:0001950!7.86e-14!20;UBERON:0000924!1.54e-13!173;UBERON:0006601!1.54e-13!173;UBERON:0001893!2.62e-13!34;UBERON:0000956!1.57e-12!25;UBERON:0000203!1.57e-12!25;UBERON:0000033!1.86e-12!123;UBERON:0001869!1.95e-12!32;UBERON:0002791!4.75e-12!33;UBERON:0002020!1.20e-11!34;UBERON:0003528!1.20e-11!34;UBERON:0000153!1.71e-11!129;UBERON:0007811!1.71e-11!129;UBERON:0001871!1.31e-10!7;UBERON:0004733!8.09e-09!12;UBERON:0002028!8.09e-09!12;UBERON:0007277!8.09e-09!12;UBERON:0001894!1.47e-08!7;UBERON:0006222!1.47e-08!7;UBERON:0004732!4.67e-08!13;UBERON:0000025!8.49e-08!194;UBERON:0003076!7.70e-07!15;UBERON:0003057!7.70e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;4.22e-21;1!UBERON:0002146;4.22e-21;1!UBERON:0002082;4.22e-21;1!UBERON:0005623;4.22e-21;1!UBERON:0001905;3.02e-11;2!UBERON:0002757;3.02e-11;2!UBERON:0010134;3.02e-11;2!UBERON:0005408;3.02e-11;2!UBERON:0001899;3.02e-11;2!UBERON:0000948;9.42e-09;22!UBERON:0002114;4.52e-08;2!UBERON:0002369;6.34e-08;3!UBERON:0001235;6.34e-08;3!UBERON:0003978;6.34e-08;3!UBERON:0004151;6.34e-08;3!UBERON:0000946;6.34e-08;3!UBERON:0006858;6.34e-08;3!UBERON:0007100;9.02e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.82e-21,1;UBERON:0005623,2.82e-21,1;UBERON:0002084,3.45e-21,1;UBERON:0002082,3.45e-21,1;UBERON:0010226,3.45e-21,1;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0000948,3.91e-08,24;UBERON:0005498,3.91e-08,24;UBERON:0004140,3.91e-08,24;UBERON:0009881,3.91e-08,24;UBERON:0004141,3.91e-08,24;UBERON:0003084,3.91e-08,24;UBERON:0007005,3.91e-08,24;UBERON:0004139,3.91e-08,24;UBERON:0004291,3.91e-08,24;UBERON:0002114,4.52e-08,2;UBERON:0003978,5.54e-08,3;UBERON:0009751,5.54e-08,3;UBERON:0000946,5.54e-08,3;UBERON:0002523,5.54e-08,3;UBERON:0005983,5.54e-08,3;UBERON:0002165,5.54e-08,3;UBERON:0002062,5.54e-08,3;UBERON:0007280,5.54e-08,3;UBERON:0004151,5.93e-08,3;UBERON:0002369,6.78e-08,3;UBERON:0001235,6.78e-08,3;UBERON:0006858,6.78e-08,3;UBERON:0007100,2.71e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0.229073192331831,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,1.3749625440701,0,0.399358000997982,0.429226048136571,0,1.5452198671947,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.303747783290123,0,0,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,1.24415452006595,1.02315497042921,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.317079050969534,0,0,0.496211178389294,0,0,1.07140367175657,0.336283722218824,0,0.227662191351298,0,0,0,0.271878931907327,0.197318320688547,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0.475680363110274,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,2.18175345170189,0,0,0,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0,0,0.833565680400634,0.535928260312357,0,0.103432995861895,0,0,0,0,0.560659312903067,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@HCN4 | |||
}} |
Revision as of 00:27, 12 January 2014
Short description: | p5@HCN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HCN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 345bp_to_ENST00000261917, NM_005477, uc002avp.2_5end |
EntrezGene: | HCN4 |
HGNC: | 16882 |
UniProt: | Q9Y3Q4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.35e-11 | 2 |
light melanocyte | 4.84e-08 | 3 |
steroid hormone secreting cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.82e-21 | 1 |
semi-lunar valve | 2.82e-21 | 1 |
heart left ventricle | 3.45e-21 | 1 |
cardiac ventricle | 3.45e-21 | 1 |
future cardiac ventricle | 3.45e-21 | 1 |
pineal body | 4.09e-11 | 2 |
regional part of epithalamus | 4.09e-11 | 2 |
secretory circumventricular organ | 4.09e-11 | 2 |
circumventricular organ | 4.09e-11 | 2 |
epithalamus | 4.09e-11 | 2 |
heart | 3.91e-08 | 24 |
primitive heart tube | 3.91e-08 | 24 |
primary heart field | 3.91e-08 | 24 |
anterior lateral plate mesoderm | 3.91e-08 | 24 |
heart tube | 3.91e-08 | 24 |
heart primordium | 3.91e-08 | 24 |
cardiac mesoderm | 3.91e-08 | 24 |
cardiogenic plate | 3.91e-08 | 24 |
heart rudiment | 3.91e-08 | 24 |
duodenum | 4.52e-08 | 2 |
valve | 5.54e-08 | 3 |
cardiac mesenchyme | 5.54e-08 | 3 |
cardial valve | 5.54e-08 | 3 |
tunica intima | 5.54e-08 | 3 |
heart layer | 5.54e-08 | 3 |
endocardium | 5.54e-08 | 3 |
endocardial cushion | 5.54e-08 | 3 |
presumptive endocardium | 5.54e-08 | 3 |
cardiac chamber | 5.93e-08 | 3 |
adrenal gland | 6.78e-08 | 3 |
adrenal cortex | 6.78e-08 | 3 |
adrenal/interrenal gland | 6.78e-08 | 3 |
primary circulatory organ | 2.71e-07 | 27 |