FFCP PHASE1:Hg19::chr15:33023199..33023239,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26585 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2001 | |||
|TSSclassifier=not | |||
|UniProt=O60565 | |||
|association_with_transcript=307bp_to_AF045800,BC069525,CU686886,HQ448400_5end | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_7_at_GREM1_5end | |||
|id=chr15:33023199..33023239,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.42e-34!180;CL:0000057!4.67e-27!75;CL:0002620!1.77e-16!23;CL:0000192!3.51e-15!42;CL:0000514!3.51e-15!42;CL:0000680!1.36e-14!57;CL:0000056!1.36e-14!57;CL:0000355!1.36e-14!57;CL:0000048!7.81e-13!430;CL:0000187!9.55e-13!54;CL:0002334!3.68e-12!12;CL:0000723!4.35e-12!436;CL:0000034!1.80e-11!444;CL:0000393!3.65e-11!60;CL:0000211!3.65e-11!60;CL:0000359!7.78e-11!32;CL:0000183!1.05e-10!59;CL:0002371!2.96e-07!591;CL:0000499!3.24e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.15e-17;12!CL:0002620;8.64e-15;23!CL:0002559;1.87e-10;5!CL:0000057;6.74e-10;73!CL:0002539;9.52e-09;10!CL:0000359;1.21e-08;32!CL:0000192;6.74e-08;43!CL:0000346;2.21e-07;3!CL:1000428;2.21e-07;3!CL:0002320;4.52e-07;188!CL:0000056;5.62e-07;4!CL:0000135;5.83e-07;3!CL:0000388;5.83e-07;3!CL:0002579;6.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.32e-29,76;CL:0002334,1.08e-17,12;CL:0000048,1.96e-15,427;CL:0000723,6.75e-15,433;CL:0002620,8.84e-15,23;CL:0000034,3.32e-14,441;CL:0002559,2.03e-10,5;CL:0000192,1.27e-09,43;CL:0000514,1.27e-09,43;CL:0000680,1.31e-09,58;CL:0000056,1.31e-09,58;CL:0000355,1.31e-09,58;CL:0000359,8.44e-09,32;CL:0002539,9.20e-09,10;CL:0002320,1.12e-08,361;CL:0000134,3.25e-08,354;CL:0000187,1.88e-07,55;CL:0000346,2.31e-07,3;CL:1000428,2.31e-07,3;CL:0000515,3.54e-07,4;CL:0002579,5.90e-07,3;CL:0000135,6.14e-07,3;CL:0000388,6.14e-07,3;CL:0000136,8.52e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;6.74e-08;43!CL:0000515;5.62e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.00e-09;5!DOID:450;1.00e-09;5!DOID:66;1.00e-09;5!DOID:423;1.00e-09;5!DOID:0080000;1.00e-09;5!DOID:11722;1.00e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.61e-10,5;DOID:450,9.61e-10,5;DOID:66,9.61e-10,5;DOID:423,9.61e-10,5;DOID:0080000,9.61e-10,5;DOID:11722,9.61e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.21e-21!83;UBERON:0002329!3.21e-21!83;UBERON:0003077!3.21e-21!83;UBERON:0003059!3.21e-21!83;UBERON:0007282!3.21e-21!83;UBERON:0009618!3.21e-21!83;UBERON:0007285!3.21e-21!83;UBERON:0004290!9.73e-19!70;UBERON:0000486!3.02e-16!82;UBERON:0005256!2.78e-14!143;UBERON:0002097!4.02e-14!40;UBERON:0002199!1.15e-13!45;UBERON:0002416!1.15e-13!45;UBERON:0001134!1.64e-13!61;UBERON:0002036!1.64e-13!61;UBERON:0003082!1.64e-13!61;UBERON:0002385!1.12e-12!63;UBERON:0001015!1.12e-12!63;UBERON:0000383!1.12e-12!63;UBERON:0000475!2.95e-12!365;UBERON:0002100!8.37e-11!216;UBERON:0003102!4.97e-10!95;UBERON:0002067!1.12e-07!9;UBERON:0004016!1.12e-07!9;UBERON:0010083!1.12e-07!9;UBERON:0003688!5.19e-07!6;UBERON:0002358!5.19e-07!6;UBERON:0003684!5.19e-07!6;UBERON:0001178!5.19e-07!6;UBERON:0001637!7.49e-07!42;UBERON:0003509!7.49e-07!42;UBERON:0004572!7.49e-07!42;UBERON:0004573!9.44e-07!33;UBERON:0004571!9.44e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.29e-12;41!UBERON:0003688;2.43e-11;6!UBERON:0002358;2.43e-11;6!UBERON:0003684;2.43e-11;6!UBERON:0001178;2.43e-11;6!UBERON:0002073;1.87e-10;5!UBERON:0002199;4.48e-10;46!UBERON:0002416;4.48e-10;46!UBERON:0004457;1.74e-09;9!UBERON:0000042;1.74e-09;9!UBERON:0004237;9.52e-09;10!UBERON:0004695;9.52e-09;10!UBERON:0002111;9.52e-09;10!UBERON:0004178;9.52e-09;10!UBERON:0001135;1.65e-08;15!UBERON:0003102;2.22e-08;50!UBERON:0002384;6.17e-08;198!UBERON:0000412;2.21e-07;3!UBERON:0001992;2.21e-07;3!UBERON:0004573;3.79e-07;33!UBERON:0004571;3.79e-07;33!UBERON:0007846;5.83e-07;3!UBERON:0000043;5.83e-07;3!UBERON:0007845;5.83e-07;3!UBERON:0000947;5.86e-07;21!UBERON:0010191;5.86e-07;21!UBERON:0002385;7.48e-07;31!UBERON:0001015;7.48e-07;31!UBERON:0000383;7.48e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.35e-15,46;UBERON:0002416,1.35e-15,46;UBERON:0002097,4.00e-15,41;UBERON:0003688,2.25e-11,6;UBERON:0002358,2.25e-11,6;UBERON:0003684,2.25e-11,6;UBERON:0001178,2.25e-11,6;UBERON:0007524,2.50e-11,73;UBERON:0002329,1.03e-10,71;UBERON:0003059,1.03e-10,71;UBERON:0007282,1.03e-10,71;UBERON:0004290,1.03e-10,71;UBERON:0009618,1.03e-10,71;UBERON:0003077,1.82e-10,72;UBERON:0007285,1.82e-10,72;UBERON:0002073,2.03e-10,5;UBERON:0005086,2.03e-10,5;UBERON:0007503,5.68e-10,78;UBERON:0003102,6.03e-10,99;UBERON:0002384,1.41e-09,371;UBERON:0000486,5.66e-09,83;UBERON:0004237,9.20e-09,10;UBERON:0004695,9.20e-09,10;UBERON:0002111,9.20e-09,10;UBERON:0004178,9.20e-09,10;UBERON:0001134,1.26e-08,62;UBERON:0002036,1.26e-08,62;UBERON:0003082,1.26e-08,62;UBERON:0001135,1.33e-08,15;UBERON:0002385,3.48e-08,64;UBERON:0001015,3.48e-08,64;UBERON:0000383,3.48e-08,64;UBERON:0004573,2.28e-07,33;UBERON:0004571,2.28e-07,33;UBERON:0000412,2.31e-07,3;UBERON:0001992,2.31e-07,3;UBERON:0005256,6.12e-07,122;UBERON:0007846,6.14e-07,3;UBERON:0000043,6.14e-07,3;UBERON:0007845,6.14e-07,3;UBERON:0000947,6.38e-07,21;UBERON:0010191,6.38e-07,21;UBERON:0001637,6.60e-07,42;UBERON:0003509,6.60e-07,42;UBERON:0004572,6.60e-07,42;UBERON:0004457,7.94e-07,12;UBERON:0000042,7.94e-07,12 | |||
|phase1_expression=4.1786027232228,7.06531728840244,1.55049844505568,3.00219895059391,4.46961094427288,5.23403114460221,0,0,0,0,0,0,0,0.37129905888014,1.98838425436749,9.41255205032485,5.42425075221579,5.11217063271161,5.85519358548608,0,0.204000691244253,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0.869079113764942,0.795285947051099,6.32625331393427,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3879622127268,0.25326102332916,1.19168262731897,2.29469296599051,2.12801029319014,1.12135520028461,1.06748995729705,0.98667019366864,0,0.269421344139376,0.163461903113459,0,0,0,0.624320153660641,0.570471821544449,1.04614076386261,0.23486899728753,0.809364721840658,0.421352420106746,0.204154171254893,0,0.103325781175765,4.75201142912821,15.083282685992,0,0,0,0.125118519871964,0.277064115484183,4.38977620880838,15.017901994152,9.76547382892879,0,4.12596162084383,3.84403299873421,4.66250182551036,6.00182192168805,2.78241828943785,3.86460810068444,3.53622027030021,1.35021065793013,4.77441325289873,4.29137416214995,4.51044503347267,0.161646056818812,9.23024940543197,2.92181084860157,2.54340888465731,0,0,0,0,0,0,0.10366105501537,0,0,9.38697193978896,18.0107462694008,8.28809528114883,3.25057549622385,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.517086863031111,0,1.690605505112,3.98907174877306,2.08014873822732,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,2.85273810081437,1.88215698667853,1.43833425785268,2.68591444859843,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,2.00068208423871,0.271265023699736,4.36738809214695,13.9174611261786,13.5624076929184,5.03708084468667,0.300946099727719,0,0,0,0.368738337083406,1.47702144595741,0,0,0,0,0,0,0,0,4.96215615637554,2.455391572609,9.82310330515758,3.71603532841533,7.67560873600055,10.6163587954781,7.42090332224955,2.46735510084249,1.06537035187876,0.98552587216571,6.75030757938707,2.90525946149898,0,0,0,0.918515585316854,1.45672934405374,2.62248829918848,0.451199612907412,0,0,0,0.105551628892876,0,0,1.0795795805107,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0.574265537996172,0,11.2478750890912,0.096670718292122,0,0,0.551346289938122,0,0,0.170453254832202,0,0,0,0,0,0,4.40737285562896,1.3940745403212,0.308033580176089,0,2.60979897622522,0,0.143124886741991,0.372158369359667,1.2655176988749,1.14378116354295,0,1.28381696410176,0,1.56989728039846,0.899362287916574,1.64722217841633,1.64937363283961,0,0,2.94880919367287,0.48763373908959,0.974853958525138,1.05650146756755,0.818999468447914,0.424216295861138,0,0,0.66343897524122,1.31535265576129,0.578775534266688,1.31178950409327,1.62328301570163,1.8589409885985,0.845086807596724,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0.844430541190656,1.31717957183961,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,9.95326680517784,0,0,0,0.197286811273867,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0.195551382734803,0.0801588202515337,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,23.0591925467138,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,1.87426823963964,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0.378806010550178,0,2.66943366478961,0.228840068396924,0.604923695052956,0.310874401165561,2.21782724984451,1.11507737014592,0,0.621051827505038,0,4.51930914748591,5.21745061811734,0,0.380805212168795,2.03435366602331,3.45512452484863,0.107410557042488,11.1368102370838,4.37905477568478,0.800055529326307,2.06037423109676,3.36749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,7.31410006502863,0,0,5.29013915536026,0.918736432059601,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,4.8102681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| |||
|short_description=p7@GREM1 | |||
}} |
Revision as of 22:39, 11 January 2014
Short description: | p7@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 307bp_to_AF045800, BC069525, CU686886, HQ448400_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | O60565 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.32e-29 | 76 |
preadipocyte | 1.08e-17 | 12 |
multi fate stem cell | 1.96e-15 | 427 |
somatic stem cell | 6.75e-15 | 433 |
skin fibroblast | 8.84e-15 | 23 |
stem cell | 3.32e-14 | 441 |
hair follicle cell | 2.03e-10 | 5 |
smooth muscle cell | 1.27e-09 | 43 |
smooth muscle myoblast | 1.27e-09 | 43 |
muscle precursor cell | 1.31e-09 | 58 |
myoblast | 1.31e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-09 | 58 |
vascular associated smooth muscle cell | 8.44e-09 | 32 |
aortic smooth muscle cell | 9.20e-09 | 10 |
connective tissue cell | 1.12e-08 | 361 |
mesenchymal cell | 3.25e-08 | 354 |
muscle cell | 1.88e-07 | 55 |
hair follicle dermal papilla cell | 2.31e-07 | 3 |
stem cell of epidermis | 2.31e-07 | 3 |
skeletal muscle myoblast | 3.54e-07 | 4 |
omentum preadipocyte | 5.90e-07 | 3 |
fibrocyte | 6.14e-07 | 3 |
tendon cell | 6.14e-07 | 3 |
fat cell | 8.52e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.61e-10 | 5 |
myotonic disease | 9.61e-10 | 5 |
muscle tissue disease | 9.61e-10 | 5 |
myopathy | 9.61e-10 | 5 |
muscular disease | 9.61e-10 | 5 |
myotonic dystrophy | 9.61e-10 | 5 |