FFCP PHASE1:Hg19::chr14:75034880..75034927,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3452 | |||
|description=CAGE_peak_at_chr14:75034880..75034927,- | |||
|id=chr14:75034880..75034927,- | |||
|ontology_enrichment_celltype=CL:0002076!5.69e-27!43;CL:0002159!2.36e-23!13;CL:0002368!3.67e-18!13;CL:0000223!4.02e-18!59;CL:0000622!3.03e-16!5;CL:0002251!7.57e-16!21;CL:0000066!4.33e-14!254;CL:0000154!1.79e-13!6;CL:0002623!1.26e-10!3;CL:0002166!1.34e-10!3;CL:0002328!2.09e-10!3;CL:0000362!2.65e-10!8;CL:0002621!2.77e-10!3;CL:0002541!4.71e-10!3;CL:0000240!4.48e-09!6;CL:0000311!4.48e-09!6;CL:0000079!4.48e-09!6;CL:0000237!4.48e-09!6;CL:0000036!4.48e-09!6;CL:0000357!4.48e-09!6;CL:0000114!4.48e-09!6;CL:0002202!7.44e-09!9;CL:0002632!7.44e-09!9;CL:0000150!7.56e-09!9;CL:0002327!3.79e-08!4;CL:0002077!6.95e-08!33;CL:0000244!1.78e-07!4;CL:0000731!1.78e-07!4;CL:0000317!2.58e-07!2;CL:1000448!2.58e-07!2;CL:0002308!2.58e-07!2;CL:0002140!2.58e-07!2;CL:0000575!3.98e-07!2;CL:0000312!8.46e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.65e-30;14!CL:0000622;2.43e-22;5!CL:0002623;1.44e-21;3!CL:0002166;6.00e-21;3!CL:0000154;1.16e-18;6!CL:0002076;1.12e-16;42!CL:0002327;1.88e-16;4!CL:0000312;1.15e-13;5!CL:0002368;2.11e-13;13!CL:0000362;7.29e-13;9!CL:0002202;1.15e-12;9!CL:0002632;1.15e-12;9!CL:0000150;1.65e-12;9!CL:0002251;6.62e-12;20!CL:0000240;1.80e-11;6!CL:0000311;1.80e-11;6!CL:0000079;1.80e-11;6!CL:0000237;1.80e-11;6!CL:0002077;6.36e-11;34!CL:0002328;1.51e-10;3!CL:0002541;4.51e-10;3!CL:0000307;4.51e-10;3!CL:0002252;4.89e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.98e-31,14;CL:0000622,2.95e-22,5;CL:0002076,1.55e-21,42;CL:0002623,2.53e-21,3;CL:0002166,2.90e-21,3;CL:0000154,1.37e-18,6;CL:0002327,2.38e-16,4;CL:0000223,5.46e-15,58;CL:0000066,5.47e-14,253;CL:0000312,1.10e-13,5;CL:0002368,2.14e-13,13;CL:0000362,6.16e-13,9;CL:0002202,1.17e-12,9;CL:0002632,1.17e-12,9;CL:0000150,1.84e-12,9;CL:0002077,4.79e-12,34;CL:0002251,7.68e-12,20;CL:0000240,1.74e-11,6;CL:0000311,1.74e-11,6;CL:0000079,1.74e-11,6;CL:0000237,1.74e-11,6;CL:0000036,1.74e-11,6;CL:0000357,1.74e-11,6;CL:0000114,1.74e-11,6;CL:0002328,1.48e-10,3;CL:0000068,4.73e-10,3;CL:0000069,4.73e-10,3;CL:0002541,4.73e-10,3;CL:0000307,4.73e-10,3;CL:0000377,4.73e-10,3;CL:0002252,5.82e-08,1;CL:0002321,3.72e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;1.80e-11;6!CL:0000114;1.80e-11;6!CL:0000377;4.51e-10;3!CL:0000223;1.20e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!2.78e-15!7;UBERON:0005631!1.33e-12!14;UBERON:0000158!1.33e-12!14;UBERON:0001004!2.76e-12!72;UBERON:0000166!1.09e-10!21;UBERON:0004815!2.09e-10!3;UBERON:0002031!2.09e-10!3;UBERON:0004119!2.51e-10!169;UBERON:0000925!2.51e-10!169;UBERON:0006595!2.51e-10!169;UBERON:0001949!2.77e-10!3;UBERON:0000476!4.71e-10!3;UBERON:0000920!4.71e-10!3;UBERON:0000165!2.65e-09!28;UBERON:0000930!2.65e-09!28;UBERON:0001044!8.27e-09!6;UBERON:0003293!8.27e-09!6;UBERON:0003294!8.27e-09!6;UBERON:0010047!8.27e-09!6;UBERON:0000167!8.27e-09!6;UBERON:0000161!1.10e-08!35;UBERON:0001911!3.79e-08!4;UBERON:0005333!3.79e-08!4;UBERON:0008425!3.79e-08!4;UBERON:0005311!3.79e-08!4;UBERON:0001708!4.91e-08!4;UBERON:0001704!4.91e-08!4;UBERON:0002185!6.81e-08!4;UBERON:0007196!1.51e-07!14;UBERON:0001558!1.51e-07!14;UBERON:0003102!2.49e-07!95;UBERON:0002419!2.58e-07!2;UBERON:0007771!2.58e-07!2;UBERON:0003297!2.58e-07!2;UBERON:0001821!2.58e-07!2;UBERON:0003487!2.58e-07!2;UBERON:0001820!2.58e-07!2;UBERON:0005089!2.58e-07!2;UBERON:0005088!2.58e-07!2;UBERON:0001987!2.66e-07!4;UBERON:0004340!2.66e-07!4;UBERON:0002365!8.39e-07!31;UBERON:0002330!8.39e-07!31;UBERON:0001444!8.55e-07!48;UBERON:0000478!8.63e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.88e-16;4!UBERON:0001708;7.25e-16;4!UBERON:0008895;7.25e-16;4!UBERON:0011159;8.31e-13;5!UBERON:0001044;4.59e-11;6!UBERON:0003293;4.59e-11;6!UBERON:0003294;4.59e-11;6!UBERON:0010047;4.59e-11;6!UBERON:0003408;4.59e-11;6!UBERON:0000167;4.59e-11;6!UBERON:0004815;1.51e-10;3!UBERON:0002031;1.51e-10;3!UBERON:0003124;4.51e-10;3!UBERON:0000920;4.51e-10;3!UBERON:0002365;5.13e-10;31!UBERON:0002330;5.13e-10;31!UBERON:0000161;5.96e-09;19!UBERON:0000166;5.96e-09;19!UBERON:0001301;2.59e-08;1!UBERON:0001041;4.34e-08;14!UBERON:0001003;9.19e-08;15!UBERON:0007376;9.19e-08;15!UBERON:0007196;1.20e-07;15!UBERON:0001558;1.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.38e-16,4;UBERON:0005333,2.38e-16,4;UBERON:0008425,2.38e-16,4;UBERON:0005311,2.38e-16,4;UBERON:0001708,4.22e-16,4;UBERON:0008895,4.22e-16,4;UBERON:0011159,5.40e-13,5;UBERON:0003102,4.62e-11,99;UBERON:0001044,6.04e-11,6;UBERON:0003293,6.04e-11,6;UBERON:0003294,6.04e-11,6;UBERON:0010047,6.04e-11,6;UBERON:0000167,6.04e-11,6;UBERON:0010188,6.47e-11,6;UBERON:0002539,6.47e-11,6;UBERON:0008816,6.47e-11,6;UBERON:0004815,1.48e-10,3;UBERON:0002031,1.48e-10,3;UBERON:0002365,3.86e-10,31;UBERON:0002330,3.86e-10,31;UBERON:0000920,4.73e-10,3;UBERON:0003124,1.93e-09,7;UBERON:0000033,1.58e-08,56;UBERON:0000076,1.98e-08,8;UBERON:0001301,2.89e-08,1;UBERON:0001003,8.34e-08,15;UBERON:0007376,8.34e-08,15;UBERON:0007383,8.34e-08,15;UBERON:0001004,1.05e-07,74;UBERON:0000166,1.14e-07,22;UBERON:0007196,1.21e-07,15;UBERON:0001558,1.21e-07,15;UBERON:0000153,1.43e-07,62;UBERON:0007811,1.43e-07,62;UBERON:0003408,9.44e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51652734687356,6.32532429434325,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,1.82147644146271,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.818238361772504,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5237799679057,5.62008766288098,7.33861498604905,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,2.51973192298289,1.98485136139341,1.07470227243418,3.48760726216754,11.5014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,6.01519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,6.12541019974004,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,1.34060455107157,0,0,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,1.37396390102793,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,1.13176968554523,2.09672001890436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65085738669511,0.693153996902029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,1.03608082081518,9.04807928597935,2.07377898544228,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr14:75034880..75034927,- | |||
}} |
Revision as of 21:01, 11 January 2014
Short description: | p@chr14:75034880..75034927, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:75034880..75034927, - |
Coexpression cluster: | C3452_Mammary_Keratinocyte_salivary_Bronchial_Small_Prostate_Placental |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 2.38e-16 | 4 |
mammary bud | 2.38e-16 | 4 |
mammary ridge | 2.38e-16 | 4 |
mammary placode | 2.38e-16 | 4 |
jaw skeleton | 4.22e-16 | 4 |
splanchnocranium | 4.22e-16 | 4 |
primary subdivision of cranial skeletal system | 5.40e-13 | 5 |
surface structure | 4.62e-11 | 99 |
saliva-secreting gland | 6.04e-11 | 6 |
gland of oral region | 6.04e-11 | 6 |
gland of foregut | 6.04e-11 | 6 |
oral gland | 6.04e-11 | 6 |
oral cavity | 6.04e-11 | 6 |
protuberance | 6.47e-11 | 6 |
pharyngeal arch | 6.47e-11 | 6 |
embryonic head | 6.47e-11 | 6 |
lower respiratory tract epithelium | 1.48e-10 | 3 |
epithelium of bronchus | 1.48e-10 | 3 |
exocrine gland | 3.86e-10 | 31 |
exocrine system | 3.86e-10 | 31 |
egg chorion | 4.73e-10 | 3 |
chorion | 1.93e-09 | 7 |
head | 1.58e-08 | 56 |
external ectoderm | 1.98e-08 | 8 |
epididymis | 2.89e-08 | 1 |
skin epidermis | 8.34e-08 | 15 |
outer epithelium | 8.34e-08 | 15 |
enveloping layer of ectoderm | 8.34e-08 | 15 |
respiratory system | 1.05e-07 | 74 |
oral opening | 1.14e-07 | 22 |
tracheobronchial tree | 1.21e-07 | 15 |
lower respiratory tract | 1.21e-07 | 15 |
anterior region of body | 1.43e-07 | 62 |
craniocervical region | 1.43e-07 | 62 |
gland of gut | 9.44e-07 | 10 |