FFCP PHASE1:Hg19::chr14:51863894..51863903,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_ENST00000556762_5end | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_1_at_ENST00000556762_5end | |||
|id=chr14:51863894..51863903,- | |||
|ontology_enrichment_celltype=CL:0002139!6.91e-31!24;CL:0000115!7.47e-23!35;CL:0000071!2.29e-22!18;CL:0002546!2.29e-22!18;CL:0000066!7.27e-21!254;CL:0000076!9.87e-21!62;CL:0000220!1.49e-20!246;CL:0002321!3.33e-20!248;CL:0000213!3.89e-20!57;CL:0000215!3.89e-20!57;CL:0002078!1.57e-16!44;CL:0000222!1.68e-16!119;CL:1000413!7.36e-12!9;CL:0002544!7.86e-11!6;CL:0005020!4.06e-10!6;CL:0002138!4.06e-10!6;CL:0005022!4.06e-10!6;CL:0002076!2.65e-09!43;CL:0000223!8.35e-08!59;CL:0002543!2.89e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.54e-49;24!CL:0000071;1.71e-40;18!CL:0000115;4.36e-34;36!CL:0002544;5.18e-26;6!CL:1000413;1.65e-24;9!CL:0002078;4.34e-21;45!CL:0002144;1.01e-20;3!CL:0000213;4.94e-18;58!CL:0000215;4.94e-18;58!CL:0002138;3.37e-10;6!CL:0000076;1.25e-09;63!CL:0000244;3.22e-07;4!CL:0000731;3.22e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.39e-49,24;CL:0000115,2.09e-41,36;CL:0000071,1.97e-40,18;CL:0002546,1.97e-40,18;CL:0002078,1.78e-32,45;CL:0000213,1.68e-31,58;CL:0000215,1.68e-31,58;CL:0002544,9.74e-26,6;CL:1000413,2.50e-24,9;CL:0002144,1.04e-20,3;CL:0000076,8.57e-17,63;CL:0000066,1.23e-15,253;CL:0000222,3.56e-13,121;CL:0002321,1.01e-10,250;CL:0005020,3.71e-10,6;CL:0002138,3.71e-10,6;CL:0005022,3.71e-10,6;CL:0000244,2.63e-07,4;CL:0000731,2.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;1.71e-40;18!CL:0005022;3.37e-10;6!CL:0000222;5.23e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.29e-22!18;UBERON:0004638!2.29e-22!18;UBERON:0004852!2.29e-22!18;UBERON:0000055!2.76e-21!69;UBERON:0000487!1.86e-19!22;UBERON:0002049!3.63e-18!79;UBERON:0007798!3.63e-18!79;UBERON:0001981!1.30e-16!60;UBERON:0007500!1.30e-16!60;UBERON:0004537!1.30e-16!60;UBERON:0006965!1.30e-16!60;UBERON:0006914!1.88e-16!25;UBERON:0004535!3.71e-12!110;UBERON:0003915!7.36e-12!9;UBERON:0004700!7.36e-12!9;UBERON:0001917!7.36e-12!9;UBERON:0004872!1.04e-11!84;UBERON:0001009!1.55e-11!113;UBERON:0001637!2.70e-10!42;UBERON:0003509!2.70e-10!42;UBERON:0004572!2.70e-10!42;UBERON:0000947!5.67e-09!21;UBERON:0010191!5.67e-09!21;UBERON:0004573!9.54e-09!33;UBERON:0004571!9.54e-09!33;UBERON:0000490!2.11e-08!138;UBERON:0003914!2.46e-08!118;UBERON:0004111!3.33e-08!241;UBERON:0002465!2.53e-07!10;UBERON:0001473!2.55e-07!8;UBERON:0004536!2.55e-07!8;UBERON:0006558!2.55e-07!8;UBERON:0001708!8.50e-07!4;UBERON:0001704!8.50e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.71e-40;18!UBERON:0001986;1.71e-40;18!UBERON:0004852;1.71e-40;18!UBERON:0000487;9.00e-33;22!UBERON:0006914;1.34e-28;25!UBERON:0003915;1.65e-24;9!UBERON:0004700;1.65e-24;9!UBERON:0001917;1.65e-24;9!UBERON:0000490;5.84e-24;33!UBERON:0010523;1.01e-20;3!UBERON:0001915;1.01e-20;3!UBERON:0001982;1.01e-20;3!UBERON:0000055;1.22e-11;65!UBERON:0007500;1.79e-10;56!UBERON:0001981;1.79e-10;56!UBERON:0004537;1.79e-10;56!UBERON:0005910;6.18e-10;6!UBERON:0000486;1.79e-08;12!UBERON:0005911;3.72e-08;36!UBERON:0001473;9.24e-08;8!UBERON:0004536;9.24e-08;8!UBERON:0006558;9.24e-08;8!UBERON:0000947;2.70e-07;21!UBERON:0010191;2.70e-07;21!UBERON:0000025;3.80e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.97e-40,18;UBERON:0001986,1.97e-40,18;UBERON:0004852,1.97e-40,18;UBERON:0000487,1.01e-32,22;UBERON:0006914,1.48e-28,25;UBERON:0003915,2.50e-24,9;UBERON:0004700,2.50e-24,9;UBERON:0001917,2.50e-24,9;UBERON:0010523,1.04e-20,3;UBERON:0001915,1.04e-20,3;UBERON:0001982,1.04e-20,3;UBERON:0000055,8.45e-18,68;UBERON:0002049,3.96e-15,78;UBERON:0007798,3.96e-15,78;UBERON:0007500,4.60e-13,59;UBERON:0001981,4.60e-13,59;UBERON:0004537,4.60e-13,59;UBERON:0006965,4.60e-13,59;UBERON:0005910,5.55e-10,6;UBERON:0004535,5.68e-10,109;UBERON:0001009,1.26e-09,112;UBERON:0004872,1.23e-08,83;UBERON:0004111,3.98e-08,240;UBERON:0001473,9.91e-08,8;UBERON:0004536,9.91e-08,8;UBERON:0006558,9.91e-08,8;UBERON:0000947,3.19e-07,21;UBERON:0010191,3.19e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,2.18638648103376,1.72046919021225,3.12426451446835,1.13061588384802,0.419499436209906,0,1.67195973229448,0.258416759169329,0.35576626268671,3.3472061276467,13.696196781711,4.56163263431108,11.2268546472158,1.10298924103761,0.81014194788176,0.714397826272638,0,0.450445921933289,1.53316637465883,0.949265659568129,1.83201743930407,0,0,0.872188104285069,0,0,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,1.15956511897978,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,3.60916119402685,0.925971025153221,1.33177906564219,0,0,0,0,0,1.87467667973554,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,2.83698264046557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,4.81215528727884,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,1.53084334748864,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.192190067365106,0.765676274967505,0.30347334256665,0,0,0,0.308033580176089,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0,0.769776901804097,0,0,0,2.58303223602738,0,1.7737206141467,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,1.94144542218394,0,0,0.609414446062818,0,0.51595809741485,0,0,0,0.193978032976839,0,0,3.01492234222852,0.993573058514948,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,6.98446480217801,0,0.219284049578707,0.530067437837643,1.73622634443823,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.577628330751691,0,0,0,0,2.0170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,1.53646629384555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,1.04313776695919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.639701945702943,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0.202056159043763,0.143444410785353,0,0,1.49418284228802,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@ENST00000556762 | |||
}} |
Revision as of 20:03, 11 January 2014
Short description: | p1@ENST00000556762 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000556762_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | -41bp_to_ENST00000556762_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.39e-49 | 24 |
endothelial cell | 2.09e-41 | 36 |
blood vessel endothelial cell | 1.97e-40 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.97e-40 | 18 |
meso-epithelial cell | 1.78e-32 | 45 |
lining cell | 1.68e-31 | 58 |
barrier cell | 1.68e-31 | 58 |
aortic endothelial cell | 9.74e-26 | 6 |
endothelial cell of artery | 2.50e-24 | 9 |
capillary endothelial cell | 1.04e-20 | 3 |
squamous epithelial cell | 8.57e-17 | 63 |
epithelial cell | 1.23e-15 | 253 |
mesodermal cell | 3.56e-13 | 121 |
embryonic cell | 1.01e-10 | 250 |
lymphangioblast | 3.71e-10 | 6 |
endothelial cell of lymphatic vessel | 3.71e-10 | 6 |
vascular lymphangioblast | 3.71e-10 | 6 |
transitional epithelial cell | 2.63e-07 | 4 |
urothelial cell | 2.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.97e-40 | 18 |
endothelium | 1.97e-40 | 18 |
cardiovascular system endothelium | 1.97e-40 | 18 |
simple squamous epithelium | 1.01e-32 | 22 |
squamous epithelium | 1.48e-28 | 25 |
endothelial tube | 2.50e-24 | 9 |
arterial system endothelium | 2.50e-24 | 9 |
endothelium of artery | 2.50e-24 | 9 |
microcirculatory vessel | 1.04e-20 | 3 |
endothelium of capillary | 1.04e-20 | 3 |
capillary | 1.04e-20 | 3 |
vessel | 8.45e-18 | 68 |
vasculature | 3.96e-15 | 78 |
vascular system | 3.96e-15 | 78 |
epithelial tube open at both ends | 4.60e-13 | 59 |
blood vessel | 4.60e-13 | 59 |
blood vasculature | 4.60e-13 | 59 |
vascular cord | 4.60e-13 | 59 |
transitional epithelium | 5.55e-10 | 6 |
cardiovascular system | 5.68e-10 | 109 |
circulatory system | 1.26e-09 | 112 |
splanchnic layer of lateral plate mesoderm | 1.23e-08 | 83 |
anatomical conduit | 3.98e-08 | 240 |
lymphatic vessel | 9.91e-08 | 8 |
lymph vasculature | 9.91e-08 | 8 |
lymphatic part of lymphoid system | 9.91e-08 | 8 |
aorta | 3.19e-07 | 21 |
aortic system | 3.19e-07 | 21 |