FFCP PHASE1:Hg19::chr14:38679584..38679601,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3232 | |||
|description=CAGE_peak_at_chr14:38679584..38679601,+ | |||
|id=chr14:38679584..38679601,+ | |||
|ontology_enrichment_celltype=CL:0002620!8.38e-27!23;CL:0000057!7.45e-12!75;CL:0000055!2.27e-11!180;CL:0002594!2.66e-11!4;CL:0000359!1.50e-09!32;CL:0000192!8.19e-08!42;CL:0000514!8.19e-08!42;CL:0000680!5.87e-07!57;CL:0000056!5.87e-07!57;CL:0000355!5.87e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.65e-28;23!CL:0002553;1.31e-14;1!CL:0002593;7.78e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.26e-28,23;CL:0002553,1.41e-14,1;CL:0000057,2.52e-13,76;CL:0002593,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.75e-14!5;DOID:450!5.75e-14!5;DOID:66!5.75e-14!5;DOID:423!5.75e-14!5;DOID:0080000!5.75e-14!5;DOID:11722!5.75e-14!5;DOID:0060084!1.60e-09!3;DOID:127!1.60e-09!3;DOID:0060072!3.27e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.53e-18;3!DOID:127;2.53e-18;3!DOID:0060072;5.37e-14;4!DOID:17;8.31e-12;5!DOID:450;8.31e-12;5!DOID:66;8.31e-12;5!DOID:423;8.31e-12;5!DOID:0080000;8.31e-12;5!DOID:11722;8.31e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.77e-18,3;DOID:127,1.77e-18,3;DOID:0060072,4.12e-14,4;DOID:17,8.78e-12,5;DOID:450,8.78e-12,5;DOID:66,8.78e-12,5;DOID:423,8.78e-12,5;DOID:0080000,8.78e-12,5;DOID:11722,8.78e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.42e-13!40;UBERON:0002199!1.31e-11!45;UBERON:0002416!1.31e-11!45;UBERON:0001310!2.66e-11!4;UBERON:0001981!2.90e-11!60;UBERON:0007500!2.90e-11!60;UBERON:0004537!2.90e-11!60;UBERON:0006965!2.90e-11!60;UBERON:0000055!2.11e-10!69;UBERON:0001637!1.48e-09!42;UBERON:0003509!1.48e-09!42;UBERON:0004572!1.48e-09!42;UBERON:0002049!1.84e-08!79;UBERON:0007798!1.84e-08!79;UBERON:0004290!9.70e-07!70;UBERON:0004872!9.73e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.17e-11;41!UBERON:0002199;6.15e-11;46!UBERON:0002416;6.15e-11;46!UBERON:0003102;4.57e-08;50!UBERON:0002456;7.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.81e-15,41;UBERON:0002199,9.87e-14,46;UBERON:0002416,9.87e-14,46;UBERON:0002456,8.04e-08,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,6.75286822147416,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,3.22901344239952,0.213557388818567,0.423863802319124,8.40255069036326,0.412210116953756,3.34932702059318,0.18611685633159,4.72573730275545,0.584622030967192,3.28163906517349,0.0920498986422993,0,5.68015348026583,0.604512589365842,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51849877464512,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0.281695602532241,0.286822704408103,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,1.72844298240254,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0,0,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0.906823702049089,0,0,0.179088841081487,0,0.219284049578707,0.530067437837643,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:38679584..38679601,+ | |||
}} |
Revision as of 19:51, 11 January 2014
Short description: | p@chr14:38679584..38679601, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:38679584..38679601, + |
Coexpression cluster: | C3232_Fibroblast_Smooth_leiomyoma_mesenchymal_nonsmall_Myoblast_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.26e-28 | 23 |
lung fibroblast | 1.41e-14 | 1 |
fibroblast | 2.52e-13 | 76 |
smooth muscle cell of the internal thoracic artery | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.81e-15 | 41 |
integument | 9.87e-14 | 46 |
integumental system | 9.87e-14 | 46 |
internal thoracic artery | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.77e-18 | 3 |
leiomyoma | 1.77e-18 | 3 |
benign neoplasm | 4.12e-14 | 4 |
musculoskeletal system disease | 8.78e-12 | 5 |
myotonic disease | 8.78e-12 | 5 |
muscle tissue disease | 8.78e-12 | 5 |
myopathy | 8.78e-12 | 5 |
muscular disease | 8.78e-12 | 5 |
myotonic dystrophy | 8.78e-12 | 5 |