FFCP PHASE1:Hg19::chr14:36982432..36982437,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=253970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |||
|TSSclassifier=strong | |||
|UniProt=E5RG42 | |||
|association_with_transcript=2bp_to_ENST00000524122_5end | |||
|coexpression_cluster_id=C3425 | |||
|description=CAGE_peak_10_at_SFTA3_5end | |||
|id=chr14:36982432..36982437,- | |||
|ontology_enrichment_celltype=CL:0002553!1.56e-09!1;CL:0000167!2.16e-09!1;CL:0000164!2.16e-09!1;CL:0000502!2.16e-09!1;CL:0000172!2.16e-09!1;CL:0000173!2.16e-09!1;CL:0002351!2.16e-09!1;CL:0000082!4.06e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000322;7.78e-11;3!CL:0000082;5.66e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.99e-11,3;CL:0000082,5.66e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.98e-51;5!UBERON:0009847;7.78e-11;3!UBERON:0003353;7.78e-11;3!UBERON:0008947;1.61e-09;29!UBERON:0001041;3.18e-09;30 | |||
|ontology_enrichment_disease=DOID:3112!9.44e-10!1;DOID:4430!2.16e-09!1;DOID:1324!5.47e-09!15;DOID:3905!7.94e-09!9;DOID:0050615!1.96e-08!16;DOID:3908!1.83e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.15e-29;1!DOID:1325;2.90e-17;7!DOID:3904;2.90e-17;7!DOID:3910;1.43e-15;2!DOID:3905;1.15e-13;9!DOID:1324;1.37e-08;15!DOID:5409;1.89e-08;4!DOID:0050615;4.11e-08;16!DOID:3908;5.23e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.33e-29,1;DOID:1325,2.90e-17,7;DOID:3904,2.90e-17,7;DOID:3910,1.78e-15,2;DOID:3905,1.15e-13,9;DOID:1324,1.37e-08,15;DOID:5409,1.70e-08,4;DOID:0050615,4.11e-08,16;DOID:3908,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.60e-26!5;UBERON:0004117!1.60e-26!5;UBERON:0007689!1.60e-26!5;UBERON:0007123!1.60e-26!5;UBERON:0003091!1.60e-26!5;UBERON:0002048!1.84e-17!22;UBERON:0000117!1.84e-17!22;UBERON:0000171!1.84e-17!22;UBERON:0000170!1.84e-17!22;UBERON:0005597!1.84e-17!22;UBERON:0000118!1.84e-17!22;UBERON:0005178!3.21e-14!34;UBERON:0002224!3.21e-14!34;UBERON:0005181!8.76e-14!35;UBERON:0005153!3.92e-13!37;UBERON:0008947!1.30e-12!38;UBERON:0003258!1.30e-12!38;UBERON:0005911!2.69e-12!82;UBERON:0009722!3.51e-12!11;UBERON:0007690!3.51e-12!11;UBERON:0000065!5.38e-11!53;UBERON:0002171!1.43e-09!1;UBERON:0006518!1.43e-09!1;UBERON:0008949!1.43e-09!1;UBERON:0000101!1.43e-09!1;UBERON:0002167!1.43e-09!1;UBERON:0005157!3.14e-09!51;UBERON:0008814!5.70e-09!15;UBERON:0001882!5.72e-09!1;UBERON:0005403!5.72e-09!1;UBERON:0000915!6.29e-09!52;UBERON:0000369!1.04e-08!4;UBERON:0002435!1.04e-08!4;UBERON:0000204!1.04e-08!4;UBERON:0010082!1.04e-08!4;UBERON:0001004!9.66e-08!72;UBERON:0004802!4.06e-07!19;UBERON:0000115!4.06e-07!19;UBERON:0004119!7.68e-07!169;UBERON:0000925!7.68e-07!169;UBERON:0006595!7.68e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.98e-51;5!UBERON:0004903;1.43e-15;2!UBERON:0002173;1.43e-15;2!UBERON:0002186;1.43e-15;2!UBERON:0002048;2.54e-12;22!UBERON:0000117;2.54e-12;22!UBERON:0000171;2.54e-12;22!UBERON:0000170;2.54e-12;22!UBERON:0004821;7.78e-11;3!UBERON:0007499;7.78e-11;3!UBERON:0003215;7.78e-11;3!UBERON:0010368;7.78e-11;3!UBERON:0009911;7.78e-11;3!UBERON:0002299;7.78e-11;3!UBERON:0006524;7.78e-11;3!UBERON:0008874;7.78e-11;3!UBERON:0002169;7.78e-11;3!UBERON:0004894;7.78e-11;3!UBERON:0009856;1.89e-08;4!UBERON:0002368;2.77e-08;33!UBERON:0004802;5.66e-07;19!UBERON:0000115;5.66e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,5.43e-51,5;UBERON:0004117,5.43e-51,5;UBERON:0007689,5.43e-51,5;UBERON:0007123,5.43e-51,5;UBERON:0003091,5.43e-51,5;UBERON:0009722,1.05e-23,11;UBERON:0007690,1.05e-23,11;UBERON:0005911,4.16e-17,82;UBERON:0004903,1.78e-15,2;UBERON:0002173,1.78e-15,2;UBERON:0002186,1.78e-15,2;UBERON:0008814,8.27e-15,18;UBERON:0005153,8.75e-13,37;UBERON:0002048,2.54e-12,22;UBERON:0000117,2.54e-12,22;UBERON:0000171,2.54e-12,22;UBERON:0000170,2.54e-12,22;UBERON:0005597,2.54e-12,22;UBERON:0000118,2.54e-12,22;UBERON:0004821,8.99e-11,3;UBERON:0003215,8.99e-11,3;UBERON:0010368,8.99e-11,3;UBERON:0009911,8.99e-11,3;UBERON:0002299,8.99e-11,3;UBERON:0006524,8.99e-11,3;UBERON:0008874,8.99e-11,3;UBERON:0002169,8.99e-11,3;UBERON:0004894,8.99e-11,3;UBERON:0005157,3.60e-10,47;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0003929,7.12e-09,54;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0005178,3.24e-08,34;UBERON:0002224,3.24e-08,34;UBERON:0002530,3.70e-08,59;UBERON:0005181,5.33e-08,35;UBERON:0002368,5.87e-08,35;UBERON:0008947,2.04e-07,38;UBERON:0003258,2.04e-07,38;UBERON:0004802,5.66e-07,19;UBERON:0000115,5.66e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,1.10043013569766,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29280684514135,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48207065856333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56636834063345,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,1.00918676322552,1.33659032384146,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@SFTA3 | |||
}} |
Revision as of 19:47, 11 January 2014
Short description: | p10@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SFTA3_5end |
Coexpression cluster: | C3425_prostate_papillary_bronchioalveolar_small_lung_thyroid_nonsmall |
Association with transcript: | 2bp_to_ENST00000524122_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | E5RG42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.99e-11 | 3 |
epithelial cell of lung | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.33e-29 | 1 |
bronchus cancer | 2.90e-17 | 7 |
bronchogenic carcinoma | 2.90e-17 | 7 |
lung adenocarcinoma | 1.78e-15 | 2 |
lung carcinoma | 1.15e-13 | 9 |
lung cancer | 1.37e-08 | 15 |
lung small cell carcinoma | 1.70e-08 | 4 |
respiratory system cancer | 4.11e-08 | 16 |
non-small cell lung carcinoma | 5.70e-07 | 5 |