FFCP PHASE1:Hg19::chr14:21748277..21748286,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr14:21748277..21748286,+ | |||
|id=chr14:21748277..21748286,+ | |||
|ontology_enrichment_celltype=CL:0000243!2.24e-10!15;CL:0000125!2.24e-10!15;CL:0000030!2.24e-10!15;CL:0000339!2.24e-10!15;CL:0000095!2.17e-09!17;CL:0000123!2.17e-09!17;CL:0002319!6.82e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.03e-12;15!CL:0000125;1.03e-12;15!CL:0000095;1.72e-11;17!CL:0002319;2.14e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.03e-12,15;CL:0000125,1.03e-12,15;CL:0000030,1.03e-12,15;CL:0000339,1.03e-12,15;CL:0000095,1.72e-11,17;CL:0000123,1.72e-11,17;CL:0002319,2.14e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.53e-66;3!UBERON:0006238;5.14e-19;10!CL:0000339;1.03e-12;15 | |||
|ontology_enrichment_disease=DOID:3093!2.94e-14!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;1.57e-17;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.57e-17,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.70e-32!5;UBERON:0005388!1.70e-32!5;UBERON:0001802!1.70e-32!5;UBERON:0001905!6.96e-21!2;UBERON:0002757!6.96e-21!2;UBERON:0010134!6.96e-21!2;UBERON:0002784!6.96e-21!2;UBERON:0005408!6.96e-21!2;UBERON:0001899!6.96e-21!2;UBERON:0000970!1.34e-18!20;UBERON:0002104!9.30e-18!21;UBERON:0000020!2.71e-16!23;UBERON:0001032!1.19e-15!24;UBERON:0004456!1.19e-15!24;UBERON:0003296!3.79e-11!4;UBERON:0010133!3.79e-11!4;UBERON:0000019!2.26e-09!19;UBERON:0000047!2.26e-09!19;UBERON:0004088!2.26e-09!19;UBERON:0003072!2.26e-09!19;UBERON:0003071!2.26e-09!19;UBERON:0004128!2.26e-09!19;UBERON:0001456!1.42e-08!21;UBERON:0005743!7.25e-08!86;UBERON:0000073!3.44e-07!94;UBERON:0001016!3.44e-07!94;UBERON:0001894!6.39e-07!7;UBERON:0006222!6.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.66e-40;5!UBERON:0005388;3.66e-40;5!UBERON:0001802;3.66e-40;5!UBERON:0000970;4.95e-23;20!UBERON:0002104;5.49e-22;21!UBERON:0000020;3.62e-20;23!UBERON:0001032;2.27e-19;24!UBERON:0004456;2.27e-19;24!UBERON:0000019;1.86e-11;19!UBERON:0000047;1.86e-11;19!UBERON:0004088;1.86e-11;19!UBERON:0010230;1.86e-11;19!UBERON:0001456;1.81e-10;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,9.87e-34,6;UBERON:0005388,9.87e-34,6;UBERON:0001802,9.87e-34,6;UBERON:0000970,5.49e-22,21;UBERON:0002104,5.49e-22,21;UBERON:0000020,2.27e-19,24;UBERON:0001032,2.27e-19,24;UBERON:0004456,2.27e-19,24;UBERON:0000019,6.00e-11,20;UBERON:0000047,6.00e-11,20;UBERON:0010312,6.00e-11,20;UBERON:0004088,6.00e-11,20;UBERON:0010230,6.00e-11,20;UBERON:0003072,6.00e-11,20;UBERON:0004128,6.00e-11,20;UBERON:0003071,6.00e-11,20;UBERON:0001456,4.74e-10,22;UBERON:0005085,1.99e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61569185248852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2062394298347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9312099297161,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:21748277..21748286,+ | |||
}} |
Revision as of 19:01, 11 January 2014
Short description: | p@chr14:21748277..21748286, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:21748277..21748286, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.03e-12 | 15 |
glial cell | 1.03e-12 | 15 |
glioblast | 1.03e-12 | 15 |
glioblast (sensu Vertebrata) | 1.03e-12 | 15 |
neuron associated cell | 1.72e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.72e-11 | 17 |
neural cell | 2.14e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
retina | 9.87e-34 | 6 |
photoreceptor array | 9.87e-34 | 6 |
posterior segment of eyeball | 9.87e-34 | 6 |
eye | 5.49e-22 | 21 |
visual system | 5.49e-22 | 21 |
sense organ | 2.27e-19 | 24 |
sensory system | 2.27e-19 | 24 |
entire sense organ system | 2.27e-19 | 24 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
face | 4.74e-10 | 22 |
ectodermal placode | 1.99e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.57e-17 | 11 |