FFCP PHASE1:Hg19::chr13:100953150..100953169,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_at_chr13:100953150..100953169,+ | |||
|id=chr13:100953150..100953169,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.57e-32;5!CL:0002321;1.31e-11;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.53e-19!10;DOID:3095!5.16e-09!22;DOID:2994!5.16e-09!22;DOID:169!5.56e-09!6;DOID:3193!2.15e-07!2;DOID:962!2.15e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:171;1.99e-63;10!DOID:3095;2.28e-29;22!DOID:2994;2.28e-29;22!DOID:169;2.54e-27;6!DOID:3193;3.11e-21;2!DOID:962;3.11e-21;2!DOID:1192;1.22e-14;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.16e-63,10;DOID:3095,2.36e-29,22;DOID:2994,2.36e-29,22;DOID:169,2.72e-27,6;DOID:3193,3.11e-21,2;DOID:962,3.11e-21,2;DOID:1192,1.22e-14,3 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.29e-24!2;UBERON:0001896!3.52e-16!3;UBERON:0005290!3.52e-16!3;UBERON:0010096!3.52e-16!3;UBERON:0001282!6.82e-13!1;UBERON:0009842!6.82e-13!1;UBERON:0003704!6.82e-13!1;UBERON:0001171!6.82e-13!1;UBERON:0001172!6.82e-13!1;UBERON:0003296!8.17e-13!4;UBERON:0010133!8.17e-13!4;UBERON:0000013!1.33e-10!5;UBERON:0002410!1.33e-10!5;UBERON:0002346!2.18e-09!90;UBERON:0004733!2.84e-09!12;UBERON:0002028!2.84e-09!12;UBERON:0007277!2.84e-09!12;UBERON:0000073!9.84e-09!94;UBERON:0001016!9.84e-09!94;UBERON:0004732!1.34e-08!13;UBERON:0001894!1.06e-07!7;UBERON:0006222!1.06e-07!7;UBERON:0003076!1.61e-07!15;UBERON:0003057!1.61e-07!15;UBERON:0003714!2.15e-07!2;UBERON:0002360!3.48e-07!2;UBERON:0000094!3.48e-07!2;UBERON:0007645!3.48e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.22e-40;4!UBERON:0000923;2.22e-40;4!UBERON:0010316;2.22e-40;4!UBERON:0005291;2.22e-40;4!UBERON:0002050;1.44e-32;5!UBERON:0005423;1.44e-32;5!UBERON:0000013;1.57e-32;5!UBERON:0002410;1.57e-32;5!UBERON:0003714;3.11e-21;2!UBERON:0000007;6.30e-21;2!UBERON:0000010;1.29e-18;8!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0001894;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.70e-32,5;UBERON:0002410,1.70e-32,5;UBERON:0003714,3.11e-21,2;UBERON:0000007,5.70e-21,2;UBERON:0000010,1.35e-18,8;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884634079449797,0,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10086159299127,0,4.07358071889661,0,8.05582467683514,13.9661229493311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:100953150..100953169,+ | |||
}} |
Revision as of 18:29, 11 January 2014
Short description: | p@chr13:100953150..100953169, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:100953150..100953169, + |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.70e-32 | 5 |
autonomic nervous system | 1.70e-32 | 5 |
neural tissue | 3.11e-21 | 2 |
pituitary gland | 5.70e-21 | 2 |
peripheral nervous system | 1.35e-18 | 8 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.16e-63 | 10 |
germ cell and embryonal cancer | 2.36e-29 | 22 |
germ cell cancer | 2.36e-29 | 22 |
neuroendocrine tumor | 2.72e-27 | 6 |
peripheral nerve sheath neoplasm | 3.11e-21 | 2 |
neurofibroma | 3.11e-21 | 2 |
peripheral nervous system neoplasm | 1.22e-14 | 3 |