FFCP PHASE1:Hg19::chr13:93879600..93879660,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4454 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK074741_5end | |||
|description=CAGE_peak_6_at_GPC6_5end | |||
|id=chr13:93879600..93879660,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.37e-24!180;CL:0000057!1.07e-12!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.33e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-12,76;CL:0002620,4.76e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.66e-17!365;UBERON:0000481!3.79e-13!347;UBERON:0005256!4.57e-10!143;UBERON:0000119!5.34e-10!312;UBERON:0000483!6.81e-10!309;UBERON:0002100!1.97e-09!216;UBERON:0000468!1.80e-07!659;UBERON:0002107!3.85e-07!19;UBERON:0006925!3.85e-07!19;UBERON:0008836!3.85e-07!19;UBERON:0003104!9.20e-07!238;UBERON:0009142!9.20e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.56e-09;19!UBERON:0006925;4.56e-09;19!UBERON:0002368;1.42e-08;33!UBERON:0002423;3.61e-07;25!UBERON:0002365;3.75e-07;31!UBERON:0002330;3.75e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.91e-09,19;UBERON:0006925,2.91e-09,19;UBERON:0008836,2.91e-09,19;UBERON:0002368,9.11e-08,35;UBERON:0003104,1.67e-07,160;UBERON:0009142,1.67e-07,160;UBERON:0009854,2.56e-07,23;UBERON:0009497,2.70e-07,25;UBERON:0000015,2.70e-07,25;UBERON:0002423,2.70e-07,25;UBERON:0006235,2.70e-07,25;UBERON:0004161,2.70e-07,25;UBERON:0002365,3.29e-07,31;UBERON:0002330,3.29e-07,31;UBERON:0008835,3.38e-07,22;UBERON:0003894,3.38e-07,22;UBERON:0002530,4.44e-07,59 | |||
|phase1_expression=0.726713517082227,1.49870366723688,2.96004248601539,0,3.5756887554183,2.61701557230111,0,0,2.61185628199839,0.737201809504527,2.09340350391728,0,0,2.35156070624089,2.65117900582333,0,1.80808358407193,0,0,1.47745269692145,1.02000345622126,2.19418305034661,3.43483184557268,3.28498620174922,2.88748071068046,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,3.19656404608826,3.2529523714611,3.00802746381534,3.0417768981773,4.7717156823066,1.94653948121054,2.9305793320861,3.54767035940102,2.89854792787316,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.25326102332916,3.17782033951725,11.7603014507014,2.12801029319014,1.68203280042692,1.06748995729705,2.22000793575444,2.8008993185979,1.34710672069688,0.817309515567294,1.21085942115945,2.30470369792,0.468642863667593,1.5608003841516,0,0.298897361103602,1.996386476944,1.78060238804945,2.94946694074722,0.61246251376468,1.35117749042945,2.37649296704261,2.37600571456411,0,0,0,1.68336113954066,2.25213335769535,0.277064115484183,1.31693286264251,0.612975591598039,1.50238058906597,0.453728732640084,3.58779271377724,1.06778694409284,1.05965950579781,3.60109315301283,2.98852334791473,4.3798891807757,2.97786970130544,6.07594796068558,2.24105111870757,3.28163906517349,2.30124746605748,2.58633690910099,9.23024940543197,2.01504196455281,0.169560592310488,0,0,0,1.34171076742555,1.45782745153634,0.929551542956147,1.65857688024593,2.27088765788066,3.6497735907583,0,0,0,2.3218396401599,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,5.07020139287323,5.89696330006576,4.72631925345123,0,0,0.857839051492628,0.219500570817251,0,0,0.370353780634118,0.977424915930974,1.03993478527958,1.44331342025273,3.014190529352,5.51820862908362,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,1.07470227243418,0.871901815541886,0,0,0,1.03664057770386,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0.224262168690721,1.30788020649984,0.4400297149257,3.36106460970222,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,5.00422977803516,0,0.823240336780769,2.28015329005615,4.6200953336531,1.58390374586686,1.50719688529793,0.871533458600294,0.899756920638513,0,0,0,0,1.14861935834114,1.42636905040718,0.579125226670317,2.26023954805422,0.895304816199478,0,0,0,0,1.27047312111232,0,0,1.00509759200609,0.637938751653163,0,0,0,6.25726607767613,1.00034104211935,1.62759014219841,0.207970861530807,0,0,0.702848489956279,2.40756879782175,0,2.0694614258501,1.99267679560631,1.29058417979192,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0,2.48107807818777,2.30192959932094,3.36792113319688,1.92208723883551,2.04682899626681,2.0911009748669,0,0.616838775210622,0.887808626565635,1.06765302817952,0,0.348631135379878,0,0.200506470303285,0.644566922551274,2.18147451512753,1.27463817604702,2.62248829918848,0.902399225814824,0.616122696835318,0.784349769176855,0,2.53323909342902,0,0,0.647747748306418,0,0.812839312631559,0.501689773854853,0.764628819135115,0.831076008928724,1.11937377361089,0,0,2.05160100093111,0.984043937099117,0.976135183992909,1.75169719801128,2.93022287418699,2.14524699793529,0,0,4.82051789532479,2.32009723901093,2.7728751080636,2.14905144616581,2.20538515975249,2.90034661144339,1.0151168573996,1.78975917573812,2.22580089116843,0,0,1.65896526242959,0.6069466851333,0.464845549297286,7.55549632393536,0,0.924100740528266,1.06461206063404,0.869932992075073,0.37064843820784,1.28812398067792,0.744316738719335,0.632758849437452,1.90630193923825,0.511795582622668,5.56320684444097,4.13664222303718,0.78494864019923,3.23770423649967,3.0199073270966,2.70968525395079,0.404364963146632,0,1.26377536871694,0.48763373908959,1.70599442741899,1.05650146756755,2.32049849393576,2.54529777516683,3.39024349860728,0.551365343546124,0,0.438450885253763,0,2.62357900818653,0.811641507850816,0,1.40847801266121,1.43411352204052,0.392996164052485,1.07001315444375,1.41904425628239,2.11107635297664,2.96365403663912,0,0.349934720244983,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,1.48171507906718,0,2.24637742490767,0,0,0,1.52362600021443,0,0,0,0,0.921722292925374,0,1.00109485027145,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0.23874448473769,0.593929361665277,0,0,0.562677665642051,2.78271762557265,0,1.47787785689595,2.98871982376605,1.10513566212459,0,1.22722419002586,0,0,0.449341755736634,0,0,0.986434056369336,0,0,0,0.185536196323703,1.99613798001194,2.3438498497671,0,0,0,1.01701460117107,0.472775363535873,1.72371686620732,0.583209226766509,4.5142498682656,0.885741385813839,0.120596438625408,0,0.331737779793674,0.295547618953547,0.87754158861589,0,0,1.23120413606075,7.63411774174908,0,0,0,0,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| |||
|short_description=p6@GPC6 | |||
}} |
Revision as of 18:16, 11 January 2014
Short description: | p6@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK074741_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.58e-12 | 76 |
skin fibroblast | 4.76e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
liver | 2.91e-09 | 19 |
digestive gland | 2.91e-09 | 19 |
liver bud | 2.91e-09 | 19 |
endocrine gland | 9.11e-08 | 35 |
mesenchyme | 1.67e-07 | 160 |
entire embryonic mesenchyme | 1.67e-07 | 160 |
digestive tract diverticulum | 2.56e-07 | 23 |
epithelium of foregut-midgut junction | 2.70e-07 | 25 |
anatomical boundary | 2.70e-07 | 25 |
hepatobiliary system | 2.70e-07 | 25 |
foregut-midgut junction | 2.70e-07 | 25 |
septum transversum | 2.70e-07 | 25 |
exocrine gland | 3.29e-07 | 31 |
exocrine system | 3.29e-07 | 31 |
hepatic diverticulum | 3.38e-07 | 22 |
liver primordium | 3.38e-07 | 22 |
gland | 4.44e-07 | 59 |