FFCP PHASE1:Hg19::chr13:76056524..76056549,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19165 | |||
|TSSclassifier=weak | |||
|UniProt=O60343 | |||
|association_with_transcript=-274bp_to_ENST00000377625,ENST00000377636,ENST00000425511,ENST00000431480,NM_014832,uc001vjl.1,uc010aer.2,uc010aes.2_5end | |||
|coexpression_cluster_id=C370 | |||
|description=CAGE_peak_7_at_TBC1D4_5end | |||
|id=chr13:76056524..76056549,- | |||
|ontology_enrichment_celltype=CL:0002139!3.66e-09!24;CL:0000071!7.03e-08!18;CL:0002546!7.03e-08!18;CL:0000115!3.93e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.09e-09;24!CL:0000071;1.22e-08;18!CL:0002543;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.06e-09,24;CL:0000071,7.16e-09,18;CL:0002546,7.16e-09,18;CL:0000115,2.17e-08,36;CL:0002543,1.88e-07,6;CL:0002078,6.91e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.22e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.27e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.18e-09!115;UBERON:0001986!7.03e-08!18;UBERON:0004638!7.03e-08!18;UBERON:0004852!7.03e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.22e-08;18!UBERON:0001986;1.22e-08;18!UBERON:0004852;1.22e-08;18!UBERON:0002619;3.90e-08;22!UBERON:0006914;4.74e-08;25!UBERON:0000487;6.80e-08;22!UBERON:0001869;8.33e-08;32!UBERON:0002791;4.00e-07;32!UBERON:0000956;7.54e-07;25!UBERON:0000203;7.54e-07;25!UBERON:0003528;9.67e-07;34!UBERON:0002020;9.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.69e-09,32;UBERON:0004638,7.16e-09,18;UBERON:0001986,7.16e-09,18;UBERON:0004852,7.16e-09,18;UBERON:0001893,2.17e-08,34;UBERON:0006914,2.54e-08,25;UBERON:0003528,2.68e-08,34;UBERON:0002020,2.68e-08,34;UBERON:0002619,2.81e-08,22;UBERON:0000487,3.50e-08,22;UBERON:0002791,5.44e-08,32;UBERON:0007023,8.76e-08,114;UBERON:0000956,5.69e-07,25;UBERON:0000203,5.69e-07,25 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0.263766978228454,0.123766352960047,0.662794751455832,0,1.20538905604795,0,0,0.123121058076788,0.408001382488506,0.626909442956176,0,0,0.125542639594803,0.152826811495903,0.410502947249729,0.0787107813136792,0,0.767658796194425,0.309632246632152,0,0,0,0.232401601740905,0,1.17440175733939,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0.50133791063589,0.434539556882471,0.795285947051099,0,0.283604451492204,0.221729397462564,0.351339142772504,0.589405839739707,0.364295288292542,0,0,0.174129737299267,0,2.8618874916641,2.28797964312051,0.74291500265913,0.79504962946682,0,1.38856200643038,1.13061588384802,0.838998872419812,1.10047216776027,0.835979866147242,1.55050055501597,1.06729878806013,1.00416183829401,0.402829317109147,2.28081631715554,2.92874469057803,1.10298924103761,0.81014194788176,1.69669483739752,2.91888184414021,1.80178368773316,3.06633274931766,0.949265659568129,1.64881569537367,0,0,0,0.496971951695318,0.25326102332916,0.662045904066094,0.286836620748814,0,1.12135520028461,2.1349799145941,0.24666754841716,0.311211035399766,0.808264032418128,1.14423332179421,0.756787138224657,0.576175924479999,0,0.624320153660641,0,0.149448680551801,0.587172493218824,0.161872944368132,0,0.204154171254893,0,0.516628905878827,0,0.247266929278557,0,0.718618141816238,0,0.250237039743928,0.277064115484183,1.31693286264251,0.30648779579902,0.45071417671979,0.113432183160021,0.538168907066586,0.85422955527427,0.635795703478686,0.300091096084402,0.618315175430633,0.515281080091258,0.37223371266318,1.35021065793013,0.194874010322397,0,0.368199594569197,0.161646056818812,0.355009592516614,0.302256294682921,0.339121184620975,0,0.272746120590835,0.573609190778008,0.365921118388786,0.662648841607426,0.464775771478074,0.518305275076852,0.504641701751257,0,0,0.643240938192885,0,0.928735856063958,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0.185176890317059,0,0,1.44331342025273,0,0.352226082707465,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0.738651018262192,0.234004265139238,0.891786973732369,0.93733833986777,0.335964256397719,0,0,0,0,0.492663237895943,2.99364675644969,2.07328115540772,3.02651902175619,3.91351543621778,0.507983154337352,1.14596527667483,0,1.71072446022705,0.411309970813294,0,0,0.784917590417525,0.87192013766656,0.80672114403045,0.129271715757778,0,1.690605505112,0.26593811658487,0,0.514414748524284,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,0.871533458600294,0.499864955910285,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0.256686072559497,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0.736148950314839,0,0.271265023699736,1.03985430765404,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,1.32845119707087,0.368738337083406,0.173767228936166,0.391602314925481,1.37257369524342,0,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0.496215615637554,0.920771839728375,0.561320188866147,0.640695746278505,0,0.160853921143607,0,0,0.887808626565635,0.821271560138091,0,0.232420756919918,0.362578348774867,0.601519410909855,0.276242966807689,0.229628896329213,0.182091168006717,0.262248829918848,0.451199612907412,0,0,0,0.211103257785751,0,1.02056223165909,0.863663664408557,3.08454505380579,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0,0.9273691048295,0.54941678891006,0.495056999523528,0,0,1.6068392984416,0.386682873168488,0.462145851343933,0.767518373630648,1.10269257987624,0.751941714077915,1.0151168573996,0.426133137080504,0.801288320820636,0,0,0.510450849978337,0.50578890427775,0,0.62962469366128,0.6970372701606,0.924100740528266,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0.762520775695299,1.02359116524534,0.42793898803392,0,0,0.719489830333259,0,0.471249609382746,1.01091240786658,0,0,0,0.487426979262569,1.05650146756755,0.409499734223957,0,1.13008116620243,1.10273068709225,0,0.438450885253763,0.578775534266688,0.655894752046633,0.405820753925408,0,0.563391205064483,0.717056761020258,0.392996164052485,0.35667105148125,0.354761064070598,0.422215270595328,0,0.379473173765715,0,0.0962221127255121,0,0,0.659006605437454,0.43050537267123,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0.865615277858669,0.426851060090485,1.27541018183058,1.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| |||
|short_description=p7@TBC1D4 | |||
}} |
Revision as of 18:04, 11 January 2014
Short description: | p7@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TBC1D4_5end |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | -274bp_to_ENST00000377625, ENST00000377636, ENST00000425511, ENST00000431480, NM_014832, uc001vjl.1, uc010aer.2, uc010aes.2_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | O60343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.06e-09 | 24 |
blood vessel endothelial cell | 7.16e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.16e-09 | 18 |
endothelial cell | 2.17e-08 | 36 |
vein endothelial cell | 1.88e-07 | 6 |
meso-epithelial cell | 6.91e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 3.69e-09 | 32 |
blood vessel endothelium | 7.16e-09 | 18 |
endothelium | 7.16e-09 | 18 |
cardiovascular system endothelium | 7.16e-09 | 18 |
telencephalon | 2.17e-08 | 34 |
squamous epithelium | 2.54e-08 | 25 |
brain grey matter | 2.68e-08 | 34 |
gray matter | 2.68e-08 | 34 |
regional part of cerebral cortex | 2.81e-08 | 22 |
simple squamous epithelium | 3.50e-08 | 22 |
regional part of telencephalon | 5.44e-08 | 32 |
adult organism | 8.76e-08 | 114 |
cerebral cortex | 5.69e-07 | 25 |
pallium | 5.69e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.27e-07 | 31 |