FFCP PHASE1:Hg19::chr13:45694583..45694696,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2963 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4653 | |||
|TSSclassifier=strong | |||
|UniProt=P13984 | |||
|association_with_transcript=0bp_to_ENST00000340473,NM_004128,uc001uzv.2,uc001uzw.2_5end | |||
|description=CAGE_peak_1_at_GTF2F2_5end | |||
|id=chr13:45694583..45694696,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.08e-08!112;CL:0000049!1.08e-08!112;CL:0000012!1.48e-08!682;CL:0000548!2.87e-08!679;CL:0000004!2.87e-08!679;CL:0000255!2.87e-08!679;CL:0000221!1.54e-07!71;CL:0002032!3.43e-07!165;CL:0000837!3.43e-07!165;CL:0000037!5.28e-07!172;CL:0000566!5.28e-07!172;CL:0000133!7.77e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.09e-09,108;CL:0000049,3.09e-09,108;CL:0002032,1.53e-07,161;CL:0000837,1.53e-07,161;CL:0000221,1.79e-07,72;CL:0000037,2.45e-07,168;CL:0000133,7.77e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.12e-21!239;DOID:162!5.47e-20!235;DOID:0050687!8.84e-11!143;DOID:0050686!7.28e-09!137;DOID:305!6.66e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.12e-21,239;DOID:162,5.47e-20,235;DOID:0050687,8.84e-11,143;DOID:0050686,7.28e-09,137;DOID:305,6.66e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;5.59e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.06e-07,20 | |||
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| |||
|short_description=p1@GTF2F2 | |||
}} |
Revision as of 17:35, 11 January 2014
Short description: | p1@GTF2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTF2F2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340473, NM_004128, uc001uzv.2, uc001uzw.2_5end |
EntrezGene: | GTF2F2 |
HGNC: | 4653 |
UniProt: | P13984 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.09e-09 | 108 |
common myeloid progenitor | 3.09e-09 | 108 |
hematopoietic oligopotent progenitor cell | 1.53e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-07 | 161 |
ectodermal cell | 1.79e-07 | 72 |
hematopoietic stem cell | 2.45e-07 | 168 |
neurectodermal cell | 7.77e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.06e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.12e-21 | 239 |
cancer | 5.47e-20 | 235 |
cell type cancer | 8.84e-11 | 143 |
organ system cancer | 7.28e-09 | 137 |
carcinoma | 6.66e-07 | 106 |