FFCP PHASE1:Hg19::chr13:41327621..41327654,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_at_chr13:41327621..41327654,- | |||
|id=chr13:41327621..41327654,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.54e-25;29!UBERON:0006965;2.37e-15;2!UBERON:0001041;2.88e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!5.56e-13!2;UBERON:0000341!7.44e-13!2;UBERON:0000007!1.87e-12!2;UBERON:0002171!2.36e-07!1;UBERON:0006518!2.36e-07!1;UBERON:0008949!2.36e-07!1;UBERON:0000101!2.36e-07!1;UBERON:0002167!2.36e-07!1;UBERON:0006834!5.69e-07!1;UBERON:0002146!6.02e-07!1;UBERON:0005623!6.02e-07!1;UBERON:0007023!8.85e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.51e-57;2!UBERON:0002171;1.15e-29;1!UBERON:0006518;1.15e-29;1!UBERON:0008949;1.15e-29;1!UBERON:0000101;1.15e-29;1!UBERON:0002167;1.15e-29;1!UBERON:0003126;3.86e-17;7!UBERON:0001005;3.86e-17;7!UBERON:0005178;7.55e-17;34!UBERON:0002224;7.55e-17;34!UBERON:0000341;2.37e-15;2!UBERON:0005181;1.56e-14;35!UBERON:0000065;1.26e-12;44!UBERON:0002048;2.22e-12;22!UBERON:0000117;2.22e-12;22!UBERON:0000171;2.22e-12;22!UBERON:0000170;2.22e-12;22!UBERON:0000915;2.87e-09;52!UBERON:0007196;1.56e-08;15!UBERON:0001558;1.56e-08;15!UBERON:0001004;4.56e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.77e-57,2;UBERON:0002171,1.33e-29,1;UBERON:0006518,1.33e-29,1;UBERON:0008949,1.33e-29,1;UBERON:0000101,1.33e-29,1;UBERON:0002167,1.33e-29,1;UBERON:0005178,3.52e-21,34;UBERON:0002224,3.52e-21,34;UBERON:0005181,1.37e-20,35;UBERON:0008947,5.33e-19,38;UBERON:0003258,5.33e-19,38;UBERON:0003126,3.71e-17,7;UBERON:0001005,3.71e-17,7;UBERON:0000341,2.05e-15,2;UBERON:0000915,5.38e-14,52;UBERON:0000065,1.72e-13,54;UBERON:0002048,2.26e-12,22;UBERON:0000117,2.26e-12,22;UBERON:0000171,2.26e-12,22;UBERON:0000170,2.26e-12,22;UBERON:0005597,2.26e-12,22;UBERON:0000118,2.26e-12,22;UBERON:0001004,6.19e-10,74;UBERON:0007196,1.53e-08,15;UBERON:0001558,1.53e-08,15;UBERON:0001041,1.72e-08,87;UBERON:0005153,1.25e-07,37;UBERON:0005177,2.40e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56289790162467,5.97376359378731,4.14239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,1.70587185520785,0.952257725854961,0,0,0,0,0,0,0,0,4.87710996670199,1.66330178273007,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr13:41327621..41327654,- | |||
}} |
Revision as of 17:26, 11 January 2014
Short description: | p@chr13:41327621..41327654, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:41327621..41327654, - |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.77e-57 | 2 |
lower lobe of right lung | 1.33e-29 | 1 |
right lung lobe | 1.33e-29 | 1 |
lower lobe of lung | 1.33e-29 | 1 |
lobe of lung | 1.33e-29 | 1 |
right lung | 1.33e-29 | 1 |
thoracic cavity element | 3.52e-21 | 34 |
thoracic cavity | 3.52e-21 | 34 |
thoracic segment organ | 1.37e-20 | 35 |
respiratory primordium | 5.33e-19 | 38 |
endoderm of foregut | 5.33e-19 | 38 |
trachea | 3.71e-17 | 7 |
respiratory airway | 3.71e-17 | 7 |
throat | 2.05e-15 | 2 |
thoracic segment of trunk | 5.38e-14 | 52 |
respiratory tract | 1.72e-13 | 54 |
lung | 2.26e-12 | 22 |
respiratory tube | 2.26e-12 | 22 |
respiration organ | 2.26e-12 | 22 |
pair of lungs | 2.26e-12 | 22 |
lung primordium | 2.26e-12 | 22 |
lung bud | 2.26e-12 | 22 |
respiratory system | 6.19e-10 | 74 |
tracheobronchial tree | 1.53e-08 | 15 |
lower respiratory tract | 1.53e-08 | 15 |
foregut | 1.72e-08 | 87 |
epithelial bud | 1.25e-07 | 37 |
trunk region element | 2.40e-07 | 101 |