FFCP PHASE1:Hg19::chr12:97874540..97874549,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr12:97874540..97874549,+ | |||
|id=chr12:97874540..97874549,+ | |||
|ontology_enrichment_celltype=CL:0000064!4.54e-09!3;CL:0005012!4.54e-09!3;CL:0000067!4.54e-09!3;CL:0002304!4.54e-09!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.40e-14;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!4.85e-14!2;UBERON:0002757!4.85e-14!2;UBERON:0010134!4.85e-14!2;UBERON:0002784!4.85e-14!2;UBERON:0005408!4.85e-14!2;UBERON:0001899!4.85e-14!2;UBERON:0000341!1.86e-13!2;UBERON:0003075!3.48e-11!86;UBERON:0007284!3.48e-11!86;UBERON:0001049!4.75e-11!57;UBERON:0005068!4.75e-11!57;UBERON:0006241!4.75e-11!57;UBERON:0007135!4.75e-11!57;UBERON:0007023!9.78e-11!115;UBERON:0002346!1.42e-10!90;UBERON:0003076!2.33e-10!15;UBERON:0003057!2.33e-10!15;UBERON:0006947!7.36e-10!3;UBERON:0004054!7.36e-10!3;UBERON:0001896!1.46e-09!3;UBERON:0005290!1.46e-09!3;UBERON:0010096!1.46e-09!3;UBERON:0001778!4.54e-09!3;UBERON:0001775!4.54e-09!3;UBERON:0002771!6.05e-09!3;UBERON:0000153!6.69e-09!129;UBERON:0007811!6.69e-09!129;UBERON:0001894!8.09e-09!7;UBERON:0006222!8.09e-09!7;UBERON:0002616!9.91e-09!59;UBERON:0004733!1.19e-08!12;UBERON:0002028!1.19e-08!12;UBERON:0007277!1.19e-08!12;UBERON:0000073!2.68e-08!94;UBERON:0001016!2.68e-08!94;UBERON:0001000!4.57e-08!1;UBERON:0005352!4.57e-08!1;UBERON:0004732!5.42e-08!13;UBERON:0001301!5.58e-08!1;UBERON:0005743!6.29e-08!86;UBERON:0002171!7.26e-08!1;UBERON:0006518!7.26e-08!1;UBERON:0008949!7.26e-08!1;UBERON:0000101!7.26e-08!1;UBERON:0002167!7.26e-08!1;UBERON:0002298!7.68e-08!8;UBERON:0003112!9.44e-08!1;UBERON:0000032!9.44e-08!1;UBERON:0005253!9.44e-08!1;UBERON:0003128!9.44e-08!1;UBERON:0002241!9.44e-08!1;UBERON:0001703!9.44e-08!1;UBERON:0004761!9.44e-08!1;UBERON:0009617!9.44e-08!1;UBERON:0005904!1.35e-07!4;UBERON:0003296!1.92e-07!4;UBERON:0010133!1.92e-07!4;UBERON:0000955!4.07e-07!69;UBERON:0006238!4.07e-07!69;UBERON:0001017!5.03e-07!82;UBERON:0000488!5.22e-07!4;UBERON:0000033!5.39e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;3.34e-66;1!UBERON:0005352;3.34e-66;1!UBERON:0001896;3.66e-23;3!UBERON:0006947;3.66e-23;3!UBERON:0005290;3.66e-23;3!UBERON:0004054;3.66e-23;3!UBERON:0005904;9.45e-18;4!UBERON:0002046;1.40e-14;5!UBERON:0002298;2.59e-12;6!UBERON:0000058;6.34e-08;10!UBERON:0003135;2.55e-07;11!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,2.39e-66,1;UBERON:0005352,2.39e-66,1;UBERON:0006947,3.27e-23,3;UBERON:0004054,3.27e-23,3;UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0005904,8.69e-18,4;UBERON:0002046,1.40e-14,5;UBERON:0004117,1.40e-14,5;UBERON:0007689,1.40e-14,5;UBERON:0007123,1.40e-14,5;UBERON:0003091,1.40e-14,5;UBERON:0002298,2.74e-12,6;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11;UBERON:0003135,2.47e-07,11;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,1.14681839138014,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,4.44657815708082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:97874540..97874549,+ | |||
}} |
Revision as of 15:22, 11 January 2014
Short description: | p@chr12:97874540..97874549, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97874540..97874549, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vas deferens | 2.39e-66 | 1 |
spermatic cord | 2.39e-66 | 1 |
male genital duct | 3.27e-23 | 3 |
internal male genitalia | 3.27e-23 | 3 |
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
duct of male reproductive system | 8.69e-18 | 4 |
thyroid gland | 1.40e-14 | 5 |
pharyngeal pouch | 1.40e-14 | 5 |
thyroid diverticulum | 1.40e-14 | 5 |
pharyngeal pouch 2 | 1.40e-14 | 5 |
thyroid primordium | 1.40e-14 | 5 |
brainstem | 2.74e-12 | 6 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
male reproductive organ | 2.47e-07 | 11 |
segmental subdivision of hindbrain | 8.38e-07 | 12 |
hindbrain | 8.38e-07 | 12 |
presumptive hindbrain | 8.38e-07 | 12 |