FFCP PHASE1:Hg19::chr12:54367122..54367144,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5123 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=96bp_to_CU674756,HQ447392_5end | |||
|coexpression_cluster_id=C1676 | |||
|description=CAGE_peak_4_at_HOXC11_5end | |||
|id=chr12:54367122..54367144,+ | |||
|ontology_enrichment_celltype=CL:0002594!2.00e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002178;6.17e-09;3!CL:0000167;8.72e-07;1!CL:0000164;8.72e-07;1!CL:0000502;8.72e-07;1!CL:0000172;8.72e-07;1!CL:0000228;8.72e-07;1!CL:0002372;8.72e-07;1!CL:0000173;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.18e-09,3;CL:0000228,6.76e-07,1;CL:0002372,6.76e-07,1;CL:0000167,8.02e-07,1;CL:0000164,8.02e-07,1;CL:0000502,8.02e-07,1;CL:0000172,8.02e-07,1;CL:0000173,8.02e-07,1;CL:0002351,8.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.09e-07;1!UBERON:0000358;3.78e-07;1!CL:0002351;8.72e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.93e-17!143;DOID:305!4.19e-09!106;DOID:162!6.02e-09!235;DOID:14566!6.48e-09!239;DOID:171!9.69e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.71e-12;2!DOID:171;2.43e-09;10!DOID:299;1.21e-07;25!DOID:3119;8.23e-07;14!DOID:3111;8.72e-07;1!DOID:3603;8.72e-07;1!DOID:4430;8.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.48e-21,143;DOID:305,3.49e-13,106;DOID:3493,1.98e-12,2;DOID:162,8.94e-12,235;DOID:14566,2.05e-11,239;DOID:171,2.44e-09,10;DOID:299,1.58e-07,25;DOID:4430,8.02e-07,1;DOID:3119,9.53e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.21e-15!9;UBERON:0001557!1.68e-07!19;UBERON:0001310!2.00e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.65e-10;9!UBERON:0001557;4.65e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.50e-10,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.352303495931295,0.323745888736263,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.389748020644795,0,0,0,0,0,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,2.02301628093722,0.723033089650446,1.21323370005633,1.52515610864684,1.42362371466658,0.943819157121151,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0.329250856225877,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0.129271715757778,0,0,0,0,0.771622122786426,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,2.65690239414175,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,0,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0.27470839445503,0.41254749960294,0,1.30012049207304,0,0.773365746336976,0,0,0.137836572484531,0.537101224341368,0.290033387828457,0,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.811641507850816,0.6196469961995,1.40847801266121,0.143411352204052,0.392996164052485,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6023610669121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0.293016358543788,0,0,1.42068073403207,0,0,0,0,0,0,0,2.74463030566391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29711999972609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0.41827123283581,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0,0,2.12863928835987,3.72755517139546,1.47807822695777,0,0,0,0,0,0,1.17330829640882,0,0,0.39961921916426,3.60226042885265,0,0,0.14405479798815,0,0.471388069233591,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.606596470166591,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.358177682162975,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0,0,0,0,1.31043939538565,0,1.05656061679314,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0.169732529954025,4.25149840203366,1.36329340684902,4.46915934378595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0.693153996902029,0,0,1.39241355481392,0,0.20170506870352,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,3.08299379645168,0,0,0,0,0,1.27865567904938,1.91244099532837,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,5.49641308245361,1.34109717480496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41405928260976,0,0,0,0.509781344063451,0,0,0,0,0,1.04313776695919,0,0,0,2.68211655728414,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,2.34640942403454,0,0,0,0,0 | |||
|short_description=p4@HOXC11 | |||
}} |
Revision as of 13:47, 11 January 2014
Short description: | p4@HOXC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXC11_5end |
Coexpression cluster: | C1676_neuroectodermal_synovial_breast_anaplastic_epitheloid_rhabdomyosarcoma_neuroepithelioma |
Association with transcript: | 96bp_to_CU674756, HQ447392_5end |
EntrezGene: | HOXC11 |
HGNC: | 5123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.18e-09 | 3 |
multinucleate cell | 6.76e-07 | 1 |
myotube | 6.76e-07 | 1 |
peptide hormone secreting cell | 8.02e-07 | 1 |
enteroendocrine cell | 8.02e-07 | 1 |
type D enteroendocrine cell | 8.02e-07 | 1 |
somatostatin secreting cell | 8.02e-07 | 1 |
pancreatic D cell | 8.02e-07 | 1 |
progenitor cell of endocrine pancreas | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.50e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.48e-21 | 143 |
carcinoma | 3.49e-13 | 106 |
signet ring cell adenocarcinoma | 1.98e-12 | 2 |
cancer | 8.94e-12 | 235 |
disease of cellular proliferation | 2.05e-11 | 239 |
neuroectodermal tumor | 2.44e-09 | 10 |
adenocarcinoma | 1.58e-07 | 25 |
somatostatinoma | 8.02e-07 | 1 |
gastrointestinal system cancer | 9.53e-07 | 14 |