FFCP PHASE1:Hg19::chr12:53564126..53564149,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51380 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18966 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000490589_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_9_at_CSAD_5end | |||
|id=chr12:53564126..53564149,- | |||
|ontology_enrichment_celltype=CL:0000181!2.76e-13!12;CL:0000417!2.76e-13!12;CL:0000668!2.76e-13!12;CL:0000414!2.76e-13!12;CL:0000412!2.76e-13!12;CL:0000182!2.76e-13!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.20e-17;12!CL:0000047;3.43e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.20e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.75e-09;11!UBERON:0009497;1.00e-07;13 | |||
|ontology_enrichment_disease=DOID:178!1.44e-17!1;DOID:326!1.44e-17!1;DOID:3978!1.44e-17!1;DOID:3394!1.44e-17!1;DOID:5844!1.44e-17!1;DOID:114!1.86e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!7.47e-23!26;UBERON:0002107!4.38e-22!19;UBERON:0006925!4.38e-22!19;UBERON:0008836!4.38e-22!19;UBERON:0008835!4.28e-19!22;UBERON:0003894!4.28e-19!22;UBERON:0009854!2.86e-18!23;UBERON:0007499!8.08e-17!25;UBERON:0009497!8.08e-17!25;UBERON:0000015!8.08e-17!25;UBERON:0002423!8.08e-17!25;UBERON:0006235!8.08e-17!25;UBERON:0004161!8.08e-17!25;UBERON:0009856!3.55e-16!26;UBERON:0002365!1.40e-13!31;UBERON:0002330!1.40e-13!31;UBERON:0002368!4.90e-12!35;UBERON:0005172!9.95e-11!55;UBERON:0005173!9.95e-11!55;UBERON:0002417!1.19e-09!61;UBERON:0000916!1.19e-09!61;UBERON:0000949!2.29e-09!45;UBERON:0003929!8.37e-08!54;UBERON:0002530!3.87e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.12e-29;19!UBERON:0006925;3.12e-29;19!UBERON:0002423;2.66e-22;25!UBERON:0002365;5.32e-18;31!UBERON:0002330;5.32e-18;31!UBERON:0002368;1.41e-15;33!UBERON:0000949;2.39e-11;43!UBERON:0005172;3.13e-08;52!UBERON:0005173;3.13e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.03e-29,19;UBERON:0006925,3.03e-29,19;UBERON:0008836,3.03e-29,19;UBERON:0008835,2.63e-25,22;UBERON:0003894,2.63e-25,22;UBERON:0009854,3.20e-24,23;UBERON:0007499,2.61e-22,25;UBERON:0009497,2.61e-22,25;UBERON:0000015,2.61e-22,25;UBERON:0002423,2.61e-22,25;UBERON:0006235,2.61e-22,25;UBERON:0004161,2.61e-22,25;UBERON:0009856,1.83e-21,26;UBERON:0002365,4.75e-18,31;UBERON:0002330,4.75e-18,31;UBERON:0002368,5.12e-16,35;UBERON:0000949,1.66e-12,45;UBERON:0003929,1.88e-10,54;UBERON:0005172,1.88e-10,54;UBERON:0005173,1.88e-10,54;UBERON:0002530,1.41e-09,59;UBERON:0002417,2.02e-09,60;UBERON:0000916,2.02e-09,60;UBERON:0005911,6.42e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4212083572394,36.3646070170722,18.3144871071235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2759395190685,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@CSAD | |||
}} |
Revision as of 13:42, 11 January 2014
Short description: | p9@CSAD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CSAD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 10bp_to_ENST00000490589_5end |
EntrezGene: | CSAD |
HGNC: | 18966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.20e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.03e-29 | 19 |
digestive gland | 3.03e-29 | 19 |
liver bud | 3.03e-29 | 19 |
hepatic diverticulum | 2.63e-25 | 22 |
liver primordium | 2.63e-25 | 22 |
digestive tract diverticulum | 3.20e-24 | 23 |
epithelial sac | 2.61e-22 | 25 |
epithelium of foregut-midgut junction | 2.61e-22 | 25 |
anatomical boundary | 2.61e-22 | 25 |
hepatobiliary system | 2.61e-22 | 25 |
foregut-midgut junction | 2.61e-22 | 25 |
septum transversum | 2.61e-22 | 25 |
sac | 1.83e-21 | 26 |
exocrine gland | 4.75e-18 | 31 |
exocrine system | 4.75e-18 | 31 |
endocrine gland | 5.12e-16 | 35 |
endocrine system | 1.66e-12 | 45 |
gut epithelium | 1.88e-10 | 54 |
abdomen element | 1.88e-10 | 54 |
abdominal segment element | 1.88e-10 | 54 |
gland | 1.41e-09 | 59 |
abdominal segment of trunk | 2.02e-09 | 60 |
abdomen | 2.02e-09 | 60 |
endo-epithelium | 6.42e-07 | 82 |