FFCP PHASE1:Hg19::chr12:48152499..48152520,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16629 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=36bp_to_ENST00000482843_5end | |||
|description=CAGE_peak_2_at_RAPGEF3_5end | |||
|id=chr12:48152499..48152520,- | |||
|ontology_enrichment_celltype=CL:0000071!8.95e-07!18;CL:0002546!8.95e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.54e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.77e-63!115;UBERON:0001049!5.62e-37!57;UBERON:0005068!5.62e-37!57;UBERON:0006241!5.62e-37!57;UBERON:0007135!5.62e-37!57;UBERON:0003075!1.35e-34!86;UBERON:0007284!1.35e-34!86;UBERON:0002346!6.66e-32!90;UBERON:0002616!1.80e-30!59;UBERON:0005743!7.82e-29!86;UBERON:0003080!1.79e-28!42;UBERON:0001017!4.40e-28!82;UBERON:0002780!1.94e-27!41;UBERON:0001890!1.94e-27!41;UBERON:0006240!1.94e-27!41;UBERON:0000955!1.98e-27!69;UBERON:0006238!1.98e-27!69;UBERON:0000073!4.87e-26!94;UBERON:0001016!4.87e-26!94;UBERON:0001893!1.08e-25!34;UBERON:0002020!2.10e-25!34;UBERON:0003528!2.10e-25!34;UBERON:0000153!2.46e-25!129;UBERON:0007811!2.46e-25!129;UBERON:0003056!4.37e-25!61;UBERON:0002791!9.11e-25!33;UBERON:0000033!6.32e-24!123;UBERON:0001869!7.05e-24!32;UBERON:0004121!4.37e-23!169;UBERON:0000924!7.70e-22!173;UBERON:0006601!7.70e-22!173;UBERON:0002619!3.15e-20!22;UBERON:0004111!1.11e-18!241;UBERON:0001950!1.37e-18!20;UBERON:0000477!2.98e-18!286;UBERON:0000956!5.05e-18!25;UBERON:0000203!5.05e-18!25;UBERON:0000064!6.04e-17!219;UBERON:0000025!1.65e-16!194;UBERON:0000483!1.76e-14!309;UBERON:0000119!5.40e-14!312;UBERON:0000062!9.20e-11!511;UBERON:0000475!3.99e-10!365;UBERON:0000467!1.39e-09!625;UBERON:0003076!1.60e-09!15;UBERON:0003057!1.60e-09!15;UBERON:0000480!1.76e-09!626;UBERON:0000481!2.30e-09!347;UBERON:0000468!2.78e-09!659;UBERON:0002420!5.91e-09!9;UBERON:0007245!5.91e-09!9;UBERON:0010009!5.91e-09!9;UBERON:0010011!5.91e-09!9;UBERON:0000454!5.91e-09!9;UBERON:0002308!6.89e-09!9;UBERON:0000125!6.89e-09!9;UBERON:0004732!1.20e-08!13;UBERON:0002298!2.53e-08!8;UBERON:0000922!2.63e-08!612;UBERON:0001871!5.69e-08!7;UBERON:0002050!7.34e-08!605;UBERON:0005423!7.34e-08!605;UBERON:0004733!7.65e-08!12;UBERON:0002028!7.65e-08!12;UBERON:0007277!7.65e-08!12;UBERON:0000923!1.36e-07!604;UBERON:0005291!1.36e-07!604;UBERON:0006598!1.36e-07!604;UBERON:0002532!1.36e-07!604;UBERON:0009663!2.84e-07!7;UBERON:0001986!8.95e-07!18;UBERON:0004638!8.95e-07!18;UBERON:0004852!8.95e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.85e-31;34!UBERON:0001869;6.76e-30;32!UBERON:0003528;8.01e-30;34!UBERON:0002020;8.01e-30;34!UBERON:0002791;1.03e-29;32!UBERON:0002619;1.20e-29;22!UBERON:0002780;4.01e-28;41!UBERON:0001890;4.01e-28;41!UBERON:0001950;7.84e-27;20!UBERON:0000073;1.07e-25;53!UBERON:0002616;1.07e-25;53!UBERON:0000956;1.88e-25;25!UBERON:0000203;1.88e-25;25!UBERON:0007023;9.33e-20;114!UBERON:0000955;1.74e-16;68!UBERON:0001017;8.01e-14;75!UBERON:0000125;5.75e-12;9!UBERON:0002308;5.75e-12;9!UBERON:0002420;6.74e-12;9!UBERON:0007245;6.74e-12;9!UBERON:0010009;6.74e-12;9!UBERON:0010011;6.74e-12;9!UBERON:0000454;6.74e-12;9!UBERON:0001871;1.51e-11;6!UBERON:0000200;1.35e-10;6!UBERON:0001016;1.54e-10;83!UBERON:0002298;3.86e-10;6!UBERON:0009663;3.83e-09;7!UBERON:0004732;5.60e-09;13!UBERON:0000349;7.27e-09;5!UBERON:0004733;9.01e-08;12!UBERON:0002028;9.01e-08;12!UBERON:0001872;8.14e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-73,114;UBERON:0000073,4.58e-45,53;UBERON:0002616,4.58e-45,53;UBERON:0001049,2.05e-44,56;UBERON:0005068,2.05e-44,56;UBERON:0006241,2.05e-44,56;UBERON:0007135,2.05e-44,56;UBERON:0002780,1.12e-38,41;UBERON:0001890,1.12e-38,41;UBERON:0003080,1.12e-38,41;UBERON:0006240,1.12e-38,41;UBERON:0001893,1.73e-36,34;UBERON:0003528,5.00e-36,34;UBERON:0002020,5.00e-36,34;UBERON:0000955,1.04e-35,68;UBERON:0006238,1.04e-35,68;UBERON:0003075,2.73e-34,82;UBERON:0007284,2.73e-34,82;UBERON:0001869,2.23e-33,32;UBERON:0002791,3.54e-33,32;UBERON:0002346,4.89e-32,86;UBERON:0002619,8.67e-30,22;UBERON:0001017,1.22e-29,81;UBERON:0001950,6.62e-27,20;UBERON:0001016,6.71e-27,89;UBERON:0003056,5.86e-26,61;UBERON:0010371,1.35e-25,104;UBERON:0000956,1.41e-25,25;UBERON:0000203,1.41e-25,25;UBERON:0010314,5.74e-25,132;UBERON:0004111,6.49e-17,240;UBERON:0000025,1.02e-16,192;UBERON:0004121,4.03e-15,171;UBERON:0000924,4.03e-15,171;UBERON:0006601,4.03e-15,171;UBERON:0011216,1.57e-14,223;UBERON:0002420,5.68e-12,9;UBERON:0007245,5.68e-12,9;UBERON:0010009,5.68e-12,9;UBERON:0010011,5.68e-12,9;UBERON:0000454,5.68e-12,9;UBERON:0000125,7.23e-12,9;UBERON:0002308,7.23e-12,9;UBERON:0001871,1.88e-11,6;UBERON:0000200,1.40e-10,6;UBERON:0002298,2.68e-10,6;UBERON:0000349,3.87e-09,5;UBERON:0000483,3.91e-09,306;UBERON:0004732,4.43e-09,13;UBERON:0009663,4.68e-09,7;UBERON:0000119,6.90e-09,309;UBERON:0004733,8.02e-08,12;UBERON:0002028,8.02e-08,12;UBERON:0007277,8.02e-08,12;UBERON:0003076,1.25e-07,15;UBERON:0003057,1.25e-07,15;UBERON:0001872,8.80e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.816002764977012,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0.0945348171640679,0,0.263504357079378,3.73290365168481,1.09288586487763,0.370784442784429,0,0,0.132957960518865,0,0.571994910780128,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0,1.10047216776027,0.626984899610432,1.55050055501597,0.35576626268671,0,0.402829317109147,0.760272105718513,0.732186172644509,0.367663080345869,2.43042584364528,0.714397826272638,0.22452937262617,0,1.53316637465883,1.89853131913626,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,9.00537313470039,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0.587043471179108,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0.451199612907412,0.693138033939733,0.784349769176855,0,0.316654886678627,0,0.510281115829547,0,0,0,0,2.29388645740534,6.64860807142979,2.46262230194396,0,0,0.256450125116389,0.328014645699706,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.64398257704175,0,0,0,0,0,0,1.9882952955326,4.50142132513641,0,0,0,2.19172787076177,1.65770349318689,0,0,0.123084805461069,0,0,0,0,0.887790650732402,0,0,7.75466196876175,2.22643435588443,0,0,0.61221999997337,11.5999932069567,0.1137934482855,0.762760950878299,0,0,0,0,0.885741385813839,3.25610384288601,1.52581736317083,0.663475559587348,1.18219047581419,0.658156191461918,0,0.41827123283581,2.6163087891291,0,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,5.06021705293358,0,0,0,1.23840590304675,1.83309043480088,0,0,0,7.68372915979718,0,3.98249557733077,0,0.19566461893209,0,3.15667522279512,1.20990716048664,1.22429104652196,0.63186579628488,0,0,0,0,0,0,18.7842300379663,0,0.173559738335131,0.0979923974143777,0.174118413160805,2.27144668714639,0,0,0.0730893170861856,0,1.93978032976839,0,0.90392296312213,0,0,4.17851253308799,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0.101998217636322,0,4.80336230967832,2.19048606227189,0,0,0,1.39641200636127,3.66656678418694,2.15361907373044,1.79711100449092,2.57535628881943,0.223171457441873,1.2764859772478,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,4.63091580779357,0.160753148465019,0,0,0,0,5.46746009922222,0,3.62506253576312,4.24882163893485,0,0.35857467866569,0,0,0.662091970365432,0,0,0,0,0,0,0,0.339936274560377,0,0,5.42988416718512,1.3223260174269,0,0,2.56289790162467,1.25763444079733,0.414239055347196,2.48083010905975,0,0,0,1.63205341010842,7.2700069266583,1.22538230705385,1.96723578425883,0,1.77213635993397,4.02686674176478,2.50381861413,1.72022758707021,2.88415533995816,3.41530216177609,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,17.9369063011563,0,0,2.21213497842769,0,0,0,0.327609848846413,3.93236654005951,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,4.49604575675217,1.41696576325585,4.31011419454308,2.66651273512982,0.504143392443436,5.39426569220899,5.65164759711479,2.85538840518309,0,0,0.733714394086716,0.115525666150338,0,0,0,1.0529445968896,0.20170506870352,0.781514011233092,0,0,0,4.05225507710368,7.81078098613847,4.13373593002368,5.13668062570645,0.546974809018219,1.09651553371436,3.96968942711435,0,1.66091155931474,1.07140367175657,0,0.606965604236632,0,0.0887023701626388,0,0,3.67036558074891,5.13027633790223,0,0,1.41287567130925,3.45654297815204,0,0,12.7397278818987,0,0.857718530119876,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,1.29068207646083,0,0,5.08064460229115,17.1830151408038,0.31020638566432,1.91107787795487,0.111855431797792,0,0.243835849964539,1.29485767437579,0.923965261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| |||
|short_description=p2@RAPGEF3 | |||
}} |
Revision as of 13:11, 11 January 2014
Short description: | p2@RAPGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAPGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000482843_5end |
EntrezGene: | RAPGEF3 |
HGNC: | 16629 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data