FFCP PHASE1:Hg19::chr11:112022637..112022642,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:112022637..112022642,- | |||
|id=chr11:112022637..112022642,- | |||
|ontology_enrichment_celltype=CL:0000557!1.14e-18!71;CL:0002009!1.57e-18!65;CL:0002194!2.95e-17!63;CL:0000576!2.95e-17!63;CL:0000040!2.95e-17!63;CL:0000559!2.95e-17!63;CL:0000839!5.71e-17!70;CL:0000763!6.49e-17!112;CL:0000049!6.49e-17!112;CL:0000860!5.01e-16!45;CL:0000766!1.08e-15!76;CL:0002057!7.12e-14!42;CL:0000077!6.17e-11!19;CL:0000066!1.56e-10!254;CL:0002076!2.41e-07!43;CL:0002032!4.47e-07!165;CL:0000837!4.47e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-24;33!CL:0002057;2.69e-24;33!CL:0000473;7.29e-22;39!CL:0000234;7.29e-22;39!CL:0000576;2.10e-12;48!CL:0000766;4.70e-12;69!CL:0000077;1.39e-09;19!CL:0000763;5.89e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.37e-27,48;CL:0000234,1.37e-27,48;CL:0000860,1.24e-25,42;CL:0002057,1.24e-25,42;CL:0002194,3.93e-21,59;CL:0000576,3.93e-21,59;CL:0000040,3.93e-21,59;CL:0000559,3.93e-21,59;CL:0002009,2.67e-20,61;CL:0000766,1.39e-18,72;CL:0000839,1.94e-18,66;CL:0000557,4.25e-18,67;CL:0000763,5.39e-15,108;CL:0000049,5.39e-15,108;CL:0000077,6.63e-10,19;CL:0002087,9.16e-09,115;CL:0002032,2.43e-08,161;CL:0000837,2.43e-08,161;CL:0002031,3.16e-08,120;CL:0000076,3.17e-08,63;CL:0000037,8.75e-08,168;CL:0000738,1.01e-07,136;CL:0000988,3.90e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.09e-19;42 | |||
|ontology_enrichment_disease=DOID:305!2.94e-15!106;DOID:162!1.59e-11!235;DOID:14566!8.45e-11!239;DOID:0050687!9.72e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.71e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.14e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.08e-15!80;UBERON:0001474!6.21e-13!86;UBERON:0002390!2.30e-09!102;UBERON:0003061!2.30e-09!102;UBERON:0004765!4.32e-09!101;UBERON:0001434!4.32e-09!101;UBERON:0001737!2.70e-08!9;UBERON:0002193!1.89e-07!112;UBERON:0002405!2.27e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;7.43e-10;4!UBERON:0004785;7.43e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.91e-15,76;UBERON:0001474,5.33e-14,82;UBERON:0004765,2.25e-12,90;UBERON:0002405,7.77e-12,93;UBERON:0002390,5.15e-11,98;UBERON:0003061,5.15e-11,98;UBERON:0001434,1.04e-10,100;UBERON:0003343,8.44e-10,4;UBERON:0004785,8.44e-10,4;UBERON:0002193,1.33e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80762226458198,1.51907609501096,0.671746422719773,0,0.515151135268373,0.145398238779565,0,0.485168122375632,1.16214518452842,1.6446715520873,1.54853185447552,0.28769239232215,0,0.236482229888585,11.721353145045,5.16387746867061,8.12558919566051,0.752969358170419,0.272906150057846,0.898893937780338,10.4068523406107,3.20929027076094,10.8687311385837,0,0,0,24.6677852834296,5.10646702222026,4.9825779919646,0.251248665256743,0,0,10.2917915447673,1.10483290796269,2.53169909952708,0,0,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0.370784442784429,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0.241011029883482,0.330881918197182,0.435758888184812,0.474541238222193,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0.804231779293047,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.468008530278475,0.743155811443641,0,0,0,0.268675568108545,0,0,0,0.44024217006613,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,3.79897366491817,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0.997896857164083,0.191505370132367,1.05836791361941,0.324621940274555,3.08876895924805,1.36940807419915,0.783399478865116,0,0.169291777801603,0,0,0,0.343505344755765,0,0.223676107892416,0,0.976940477010201,0,0,0.540911356951966,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,1.47787785689595,0.19924798825107,0,0,0,0,0,0.449341755736634,1.43216939740487,0,0,0,0,0,0.0927680981618513,0,0,0,0,1.2517279311405,0.762760950878299,0.709163045303809,0,0,0,0,0,0,0.110579259931225,0,0,0,0.697118721393016,0.0769502585037971,0,0,0,0.325942115766024,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0.677294319023596,0.730893170861856,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0,1.75996244461323,0,0,1.39866726707491,0.144090417154106,0,0,0,0.124252535565433,0.471388069233591,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0,0,0,0.2249738915515,0.77380195455795,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0.171086837884329,0,0.106787412567695,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,1.14241563650639,0,0,0.107410557042488,0,0,0,0,0,0,0,0.643324774124777,0,1.81364740409818,0.231522474323834,1.95789363605174,0.358177682162975,0.617602894321944,0.438568099157414,1.59020231351293,1.54331230616732,1.68942440653073,0.512483037175893,1.72715170865599,0.607719912354764,0.138258436151731,0,0,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0,2.38457178078183,1.73288499225507,0,0,0,0,0,0,0.261906694481422,1.31017534008077,0.739280431085226,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.894336993477167,0,0.336283722218824,0,0,0,0,0,0,0,0.590969204419841,0.333694205676207,0,0.157115589916002,0.280272163313789,0,0,2.38875843943525,0.142953088353313,0,0.116241425368125,0,0,0,0.51215543128185,0,0,0,0,0,2.97838929107265,0.31020638566432,0,1.78968690876468,0.294450700845729,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0.588925401344836,0.594092800654172,0,0,0,0,0,0.357107877211315,0,0.160482733378337,0,0,1.57673541466596,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.310298987585686,0.426467963801962,0,0.0645889098360061,0,0.448527450322454,0,0,0.435433495793923,0,0,0,0,0.08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| |||
|short_description=p@chr11:112022637..112022642,- | |||
}} |
Revision as of 10:20, 11 January 2014
Short description: | p@chr11:112022637..112022642, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:112022637..112022642, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.37e-27 | 48 |
phagocyte | 1.37e-27 | 48 |
classical monocyte | 1.24e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-25 | 42 |
monopoietic cell | 3.93e-21 | 59 |
monocyte | 3.93e-21 | 59 |
monoblast | 3.93e-21 | 59 |
promonocyte | 3.93e-21 | 59 |
macrophage dendritic cell progenitor | 2.67e-20 | 61 |
myeloid leukocyte | 1.39e-18 | 72 |
myeloid lineage restricted progenitor cell | 1.94e-18 | 66 |
granulocyte monocyte progenitor cell | 4.25e-18 | 67 |
myeloid cell | 5.39e-15 | 108 |
common myeloid progenitor | 5.39e-15 | 108 |
mesothelial cell | 6.63e-10 | 19 |
nongranular leukocyte | 9.16e-09 | 115 |
hematopoietic oligopotent progenitor cell | 2.43e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.43e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 3.16e-08 | 120 |
squamous epithelial cell | 3.17e-08 | 63 |
hematopoietic stem cell | 8.75e-08 | 168 |
leukocyte | 1.01e-07 | 136 |
hematopoietic cell | 3.90e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.91e-15 | 76 |
bone element | 5.33e-14 | 82 |
skeletal element | 2.25e-12 | 90 |
immune system | 7.77e-12 | 93 |
hematopoietic system | 5.15e-11 | 98 |
blood island | 5.15e-11 | 98 |
skeletal system | 1.04e-10 | 100 |
mucosa of oral region | 8.44e-10 | 4 |
respiratory system mucosa | 8.44e-10 | 4 |
hemolymphoid system | 1.33e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.14e-10 | 14 |