FFCP PHASE1:Hg19::chr11:46342451..46342490,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C882 | |||
|description=CAGE_peak_at_chr11:46342451..46342490,+ | |||
|id=chr11:46342451..46342490,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.35e-34!180;CL:0000057!4.71e-23!75;CL:0000183!1.41e-11!59;CL:0000680!2.07e-11!57;CL:0000056!2.07e-11!57;CL:0000355!2.07e-11!57;CL:0000187!5.91e-11!54;CL:0002620!9.03e-11!23;CL:0000393!6.69e-10!60;CL:0000211!6.69e-10!60;CL:0000192!6.74e-08!42;CL:0000514!6.74e-08!42;CL:0002334!4.29e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.00e-10;23!CL:0000134;1.24e-10;55!CL:0000057;1.21e-09;73!CL:0000723;1.23e-09;61!CL:0000048;1.97e-09;58!CL:0002334;1.07e-08;12!CL:0002320;1.78e-08;188!CL:0000187;1.08e-07;55!CL:0000192;2.33e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.46e-25,76;CL:0000048,6.86e-15,427;CL:0000723,4.93e-14,433;CL:0000034,6.07e-13,441;CL:0000680,2.73e-12,58;CL:0000056,2.73e-12,58;CL:0000355,2.73e-12,58;CL:0000187,2.94e-12,55;CL:0002620,1.15e-10,23;CL:0000393,6.87e-10,61;CL:0000211,6.87e-10,61;CL:0000192,3.33e-09,43;CL:0000514,3.33e-09,43;CL:0002334,4.16e-09,12;CL:0002320,1.70e-07,361;CL:0000134,2.53e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000355;1.10e-07;58!CL:0000514;2.33e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.62e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.82e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.17e-14!83;UBERON:0002329!1.17e-14!83;UBERON:0003077!1.17e-14!83;UBERON:0003059!1.17e-14!83;UBERON:0007282!1.17e-14!83;UBERON:0009618!1.17e-14!83;UBERON:0007285!1.17e-14!83;UBERON:0004290!3.88e-13!70;UBERON:0005256!9.74e-12!143;UBERON:0002385!3.68e-11!63;UBERON:0001015!3.68e-11!63;UBERON:0000383!3.68e-11!63;UBERON:0001134!4.79e-11!61;UBERON:0002036!4.79e-11!61;UBERON:0003082!4.79e-11!61;UBERON:0000486!3.96e-10!82;UBERON:0000475!4.44e-08!365;UBERON:0002199!4.61e-08!45;UBERON:0002416!4.61e-08!45;UBERON:0003102!5.02e-08!95;UBERON:0002100!2.87e-07!216;UBERON:0000481!9.35e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.45e-08;198!UBERON:0002385;1.60e-07;31!UBERON:0001015;1.60e-07;31!UBERON:0000383;1.60e-07;31!UBERON:0002199;4.78e-07;46!UBERON:0002416;4.78e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.83e-13,73;UBERON:0002329,6.68e-13,71;UBERON:0003059,6.68e-13,71;UBERON:0007282,6.68e-13,71;UBERON:0004290,6.68e-13,71;UBERON:0009618,6.68e-13,71;UBERON:0003077,1.61e-12,72;UBERON:0007285,1.61e-12,72;UBERON:0001134,2.61e-12,62;UBERON:0002036,2.61e-12,62;UBERON:0003082,2.61e-12,62;UBERON:0007503,7.57e-12,78;UBERON:0002385,1.61e-11,64;UBERON:0001015,1.61e-11,64;UBERON:0000383,1.61e-11,64;UBERON:0000486,1.07e-10,83;UBERON:0002199,2.88e-10,46;UBERON:0002416,2.88e-10,46;UBERON:0003102,9.93e-09,99;UBERON:0005256,1.26e-08,122;UBERON:0002097,3.95e-08,41;UBERON:0003104,1.17e-07,160;UBERON:0009142,1.17e-07,160;UBERON:0002384,1.19e-07,371 | |||
|phase1_expression=2.18014055124668,5.1384125733836,3.66481450649525,2.00146596706261,1.34088328328186,2.61701557230111,2.53299878168311,2.52687949370732,1.30592814099919,0.982935746006035,0,1.09220686065086,2.11013582582763,0.990130823680373,0.331397375727916,6.05092631806598,6.62963980826375,3.65155045193687,6.34312638427659,0.61560529038394,1.22400414746552,0.940364164434263,0,0.958120975510189,0.376627918784408,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,1.34140171940727,0.767175371061182,13.0118094858444,1.00267582127178,9.27017721349272,0.795285947051099,1.45990461090791,0.283604451492204,0.665188192387692,0.87834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,8.94549513051573,1.77282716330412,0.397227542439656,4.87622255272983,7.80270440836386,1.68203280042692,3.20246987189115,5.42668606517752,0,1.21239604862719,0.326923806226917,0.605429710579726,1.72852777344,0.937285727335186,0.624320153660641,0.570471821544449,3.88566569434683,0.822041490506354,1.45685649931318,0.842704840213491,0.408308342509787,2.21101771161182,1.85986406116378,2.37600571456411,8.65434252474949,2.73048408581408,5.74894513452991,1.17835279767846,1.7516592782075,0.554128230968366,2.19488810440419,3.67785354958824,3.45547535485173,1.36118619792025,12.3778848625315,7.47450860864986,6.78182083710598,4.20127534518163,3.81294358182224,5.66809188100384,6.51408997160564,7.08860595413318,3.50773218580315,5.55354303337052,4.14224543890347,7.27407255684654,13.1353549231147,4.63459651847145,3.05209066158878,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.207322110030741,0.756962552626885,0,1.56449532329816,12.8648187638577,2.76269842704961,2.3218396401599,2.88751792667834,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,1.6462960453256,2.94017422771084,0,0,0,0,0.737930631258681,2.91665277507493,0,0,0,0.462942225792648,1.3032332212413,2.07986957055916,0,0.927443239800615,1.6437217193015,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.66004457238855,1.93907573636667,0,5.917119267892,6.64845291462176,10.4007436911366,2.57207374262142,0,1.3321108950805,10.4373935370448,10.8524321078289,4.93944202068461,2.28015329005615,3.19852753868291,0,1.50719688529793,0,1.79951384127703,0,0,0,7.18874566474748,5.7430967917057,1.42636905040718,1.30303176000821,0.821905290201534,1.07436577943937,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0,0.736148950314839,2.50085260529839,1.08506009479894,23.708678214512,34.7936528154465,23.6553622550902,8.08275763449721,0.601892199455438,4.5481500811197,0,15.277188766315,0.921845842708516,3.21469373531907,0.587403472388222,3.0882908142977,0,0,0,0.606255142892519,3.32870879020994,4.5358543999452,1.98486246255021,1.68808170616869,7.29716245525991,2.81906128362542,2.55853624533352,9.97294311090366,2.96836132889982,9.56100101576464,2.84098760501003,5.00975651684236,9.34657972530518,3.95115286763861,0.120859449591622,0.200506470303285,0.184161977871793,5.62590796006573,11.8359259204366,7.73634048260602,0,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0.340187410553031,2.80690690932781,0,0.270946437543853,2.00675909541941,0,0,0,0.219259876645935,0,0.256450125116389,0.984043937099117,0.650756789328606,0,9.43165487628937,4.70304149547352,0,0,1.6068392984416,2.41676795730305,0.308097234229289,1.38153307253517,1.10269257987624,3.11518710117994,3.62541734785571,1.27839941124151,4.98579399621729,0,0,0,0,18.5938219718914,19.5183655034997,0.6970372701606,1.23213432070436,1.06461206063404,0,1.29726953372744,0,0,0,2.47819252100972,1.02359116524534,6.41908482050881,0,0,1.43897966066652,4.11805544604082,2.94531005864216,0.404364963146632,0,0.842516912477962,1.95053495635836,4.14312932373184,3.16950440270266,7.50749512743922,16.9686518344455,2.26016233240486,0.551365343546124,1.32687795048244,1.75380354101505,2.89387767133344,6.55894752046633,0.405820753925408,3.0982349809975,1.69017361519345,6.31009949697827,1.76848273823618,0.35667105148125,1.06428319221179,8.2331977766089,9.87884678879706,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0.63337622438398,0.796991953004279,0,0,0.613612095012929,0.369254416383208,2.17727711363265,0.0898683511473268,0,0,0.887790650732402,0,0,0,0.278304294485554,1.99613798001194,0,0.0874599999961957,0,0,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0,0,0,0,0,0.615602068030377,1.93701494939902,0,0,0.434589487688032,0,1.19076871422421,0.533034776018635,0,0,0,0.225595660617181,0.980312671588698,1.3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| |||
|short_description=p@chr11:46342451..46342490,+ | |||
}} |
Revision as of 07:31, 11 January 2014
Short description: | p@chr11:46342451..46342490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr11:46342451..46342490, + |
Coexpression cluster: | C882_Olfactory_Mesenchymal_Smooth_tenocyte_Osteoblast_Prostate_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.46e-25 | 76 |
multi fate stem cell | 6.86e-15 | 427 |
somatic stem cell | 4.93e-14 | 433 |
stem cell | 6.07e-13 | 441 |
muscle precursor cell | 2.73e-12 | 58 |
myoblast | 2.73e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.73e-12 | 58 |
muscle cell | 2.94e-12 | 55 |
skin fibroblast | 1.15e-10 | 23 |
electrically responsive cell | 6.87e-10 | 61 |
electrically active cell | 6.87e-10 | 61 |
smooth muscle cell | 3.33e-09 | 43 |
smooth muscle myoblast | 3.33e-09 | 43 |
preadipocyte | 4.16e-09 | 12 |
connective tissue cell | 1.70e-07 | 361 |
mesenchymal cell | 2.53e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.83e-13 | 73 |
somite | 6.68e-13 | 71 |
presomitic mesoderm | 6.68e-13 | 71 |
presumptive segmental plate | 6.68e-13 | 71 |
dermomyotome | 6.68e-13 | 71 |
trunk paraxial mesoderm | 6.68e-13 | 71 |
paraxial mesoderm | 1.61e-12 | 72 |
presumptive paraxial mesoderm | 1.61e-12 | 72 |
skeletal muscle tissue | 2.61e-12 | 62 |
striated muscle tissue | 2.61e-12 | 62 |
myotome | 2.61e-12 | 62 |
epithelial vesicle | 7.57e-12 | 78 |
muscle tissue | 1.61e-11 | 64 |
musculature | 1.61e-11 | 64 |
musculature of body | 1.61e-11 | 64 |
multilaminar epithelium | 1.07e-10 | 83 |
integument | 2.88e-10 | 46 |
integumental system | 2.88e-10 | 46 |
surface structure | 9.93e-09 | 99 |
trunk mesenchyme | 1.26e-08 | 122 |
skin of body | 3.95e-08 | 41 |
mesenchyme | 1.17e-07 | 160 |
entire embryonic mesenchyme | 1.17e-07 | 160 |
connective tissue | 1.19e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.82e-07 | 14 |