FFCP PHASE1:Hg19::chr11:14541872..14541956,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5682 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9530 | |||
|TSSclassifier=strong | |||
|UniProt=B4DEV8,F5GX11 | |||
|association_with_transcript=0bp_to_ENST00000419365,ENST00000528307,ENST00000530457,ENST00000531156,ENST00000532256,ENST00000533331,ENST00000555531,uc001mlj.2_5end | |||
|description=CAGE_peak_1_at_PSMA1_5end | |||
|id=chr11:14541872..14541956,- | |||
|ontology_enrichment_celltype=CL:0000012!1.91e-43!682;CL:0000548!4.36e-41!679;CL:0000004!4.36e-41!679;CL:0000255!4.36e-41!679;CL:0000003!4.79e-34!722;CL:0000144!3.09e-33!625;CL:0002371!6.16e-25!591;CL:0000034!1.10e-24!444;CL:0000063!1.07e-23!578;CL:0000723!5.15e-22!436;CL:0000048!3.77e-21!430;CL:0000134!6.77e-14!358;CL:0002320!8.75e-14!365;CL:0000219!6.97e-13!390;CL:0000055!2.48e-08!180;CL:0000860!2.53e-08!45;CL:0002057!9.80e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.09e-08;33!CL:0002057;9.09e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,9.90e-24,441;CL:0000723,4.04e-21,433;CL:0000048,2.80e-20,427;CL:0000134,2.45e-13,354;CL:0002320,3.16e-13,361;CL:0000219,2.45e-12,386;CL:0000860,9.80e-08,42;CL:0002057,9.80e-08,42;CL:0000473,7.19e-07,48;CL:0000234,7.19e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.65e-08!239;DOID:162!4.06e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.65e-08,239;DOID:162,4.06e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.49e-12!375;UBERON:0001737!4.95e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.95e-07;9!UBERON:0001557;4.95e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.08e-12,371;UBERON:0001737,4.95e-07,9 | |||
|phase1_expression=298.315898762254,221.165841179386,286.278394718917,277.203036438171,266.835773373091,307.06316048333,263.431873295043,246.370750636464,224.097268995461,159.235590852978,86.527344828581,139.14715404692,112.892266681778,259.785574863138,195.855849055198,279.014935777487,263.980203274502,301.618067329985,293.247612073095,152.17762778291,98.3283331797299,73.9753142688287,206.948618695754,189.023581025653,161.950005077296,222.057357103546,222.574697998803,231.488407843531,133.350489851778,210.72233955537,142.895281820738,235.371833466605,160.241548790029,240.340106608412,198.161099084412,245.810602970752,326.777288979685,156.780700614521,125.941913011249,117.402881057276,125.168750100118,127.937998077497,125.181725870215,183.492577339811,177.60169353374,153.070542609512,237.310046680704,219.974820091677,270.373661791425,264.964693328701,209.027136527746,320.669903728922,350.606357309141,274.330990523126,358.880189475006,254.315400722059,245.342628902003,330.118798649829,359.34248964344,368.747452110432,305.603146131942,203.188400915017,198.466339333524,174.325922967872,377.562219455788,270.642752177674,320.130635983726,216.576349451313,195.034611489155,268.879789744934,377.769289643222,405.841954858296,455.072913139992,254.56262000589,248.534426659136,276.959070716565,260.827081522162,276.475659721213,198.817550744288,230.290296942929,199.115593876289,208.967791906741,174.236282016709,160.018613099805,181.459887788165,160.877293907573,164.162354684765,172.425731986345,186.414654125331,182.224267116255,111.565741945452,127.430470093494,120.416066859447,321.176328447033,311.082252454753,267.598230131478,127.27122126365,121.833336452241,104.65116299075,195.273826616312,188.057147847582,194.113600351241,138.326977169617,249.002371138363,207.107952954811,214.001742167778,178.459746221145,200.078641411505,194.178605906898,173.317551452275,182.114661720874,191.270036585135,171.122693889018,168.01564004034,132.760115232321,211.661852159054,228.399414186745,224.388721900157,193.813084086939,161.512665062317,151.702444748546,178.684984356294,159.157900865206,165.742661444972,189.894704359566,155.562654592919,167.510111371894,108.061214368457,107.243518509186,95.5841065626473,114.589227167562,274.316651618787,240.12589114215,252.284528364427,231.618114713781,242.328226221458,234.609354380074,141.124112387764,232.272045772115,204.877963255409,197.716102595227,103.146021954449,97.6311372624013,130.516123860119,169.413739487745,164.378472010508,167.659988214289,165.512493267907,216.786071185668,226.960533312364,205.917854031906,205.596068230364,146.840432180012,144.718833132546,173.253267154691,265.764028514105,235.328332320449,197.430404005367,187.13305417321,176.397762926981,215.916513970503,261.533604367168,126.912269925048,259.202471643837,203.345628918322,237.447977507368,129.5534480053,143.917472057686,202.377961454966,302.815745402233,203.720339250613,79.068250461638,100.822868678565,134.753062112043,197.794836774737,280.233322313715,281.899145951343,285.40243764507,194.712941826898,192.312416848811,292.492248299392,181.300648086613,160.584894266279,226.448639749146,238.000530933196,173.001539798157,173.42895326848,131.688644690594,262.214464537469,249.296186014924,257.948422632409,205.158069130657,213.348540677197,220.50776652253,202.725092056109,236.21039219053,150.752314735442,160.380385733077,161.959838677455,114.680331604191,87.6714133015811,271.526151807909,171.787727784207,164.576084597605,139.594883440106,184.50565307101,125.448779187008,323.7354507387,236.794319109298,227.438619091774,254.954077094953,239.172603579269,231.559033198772,256.352337345401,235.996173828456,205.738349002104,248.366926155895,251.676472921382,221.287956336088,233.578552103183,248.151705169113,272.735929902222,268.075296442881,208.528460563197,260.745291284838,164.625837753288,259.072151819261,236.830695990494,277.122553743801,231.475135849322,281.590069577201,243.074921144503,204.948887352059,152.448102351714,219.634524950444,229.86212437583,243.99526480432,368.880602524233,342.901259618859,338.620496986292,365.183343716956,324.422492253593,341.90696213909,374.426542760777,377.530098901166,390.518364300586,129.915360013938,60.3039627354817,108.65553899149,86.7351397174697,140.698088652232,192.634134468815,139.426417976811,257.372986958741,225.314819410984,276.91044582182,198.86751716043,428.25067991153,261.37532827024,239.526307625116,195.159174880885,126.872043804109,310.312385354338,206.587981665587,200.886275837491,357.162591760897,355.572873658837,343.789253087919,169.893945561244,190.583927985062,160.041053956808,265.360836667896,176.127927312143,373.99799760724,273.306922579544,328.918225602337,250.136953909055,286.274429436252,254.949481644865,166.520174408829,144.751625517744,79.8213244831972,85.1748924694242,62.9949742797636,184.71537449592,98.1710253684774,159.415728205664,143.700854659072,192.184583862512,209.038768259367,146.057307074225,177.615637603051,138.19934182015,300.686971865895,260.999594114953,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| |||
|short_description=p1@PSMA1 | |||
}} |
Revision as of 06:43, 11 January 2014
Short description: | p1@PSMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000419365, ENST00000528307, ENST00000530457, ENST00000531156, ENST00000532256, ENST00000533331, ENST00000555531, uc001mlj.2_5end |
EntrezGene: | PSMA1 |
HGNC: | 9530 |
UniProt: | B4DEV8F5GX11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 9.90e-24 | 441 |
somatic stem cell | 4.04e-21 | 433 |
multi fate stem cell | 2.80e-20 | 427 |
mesenchymal cell | 2.45e-13 | 354 |
connective tissue cell | 3.16e-13 | 361 |
motile cell | 2.45e-12 | 386 |
classical monocyte | 9.80e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.80e-08 | 42 |
defensive cell | 7.19e-07 | 48 |
phagocyte | 7.19e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.08e-12 | 371 |
larynx | 4.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.65e-08 | 239 |
cancer | 4.06e-07 | 235 |