FFCP PHASE1:Hg19::chr11:2018773..2018785,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-83bp_to_ENST00000439725_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_12_at_H19_5end | |||
|id=chr11:2018773..2018785,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.78e-18;19!CL:0000188;2.96e-08;9!CL:0002577;3.59e-07;3!CL:0002541;8.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.02e-18,19;CL:0000188,2.76e-08,9;CL:0002577,3.56e-07,3;CL:0002541,8.44e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.15e-12!14;UBERON:0000158!7.15e-12!14;UBERON:0001737!2.61e-10!9;UBERON:0001557!2.99e-10!19;UBERON:0003104!3.18e-10!238;UBERON:0009142!3.18e-10!238;UBERON:0000478!4.16e-10!24;UBERON:0004923!4.68e-10!57;UBERON:0003124!4.58e-09!7;UBERON:0000481!5.39e-09!347;UBERON:0004119!4.10e-08!169;UBERON:0000925!4.10e-08!169;UBERON:0006595!4.10e-08!169;UBERON:0000077!1.46e-07!130;UBERON:0000064!2.69e-07!219;UBERON:0000063!2.84e-07!97;UBERON:0004921!3.39e-07!129;UBERON:0004185!3.39e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.45e-18;16!UBERON:0002036;1.45e-18;16!UBERON:0000478;1.41e-17;24!UBERON:0001737;6.37e-16;9!UBERON:0001557;6.37e-16;9!UBERON:0005631;2.37e-12;10!UBERON:0000158;2.37e-12;10!UBERON:0001987;1.05e-08;4!UBERON:0002385;1.05e-07;31!UBERON:0001015;1.05e-07;31!UBERON:0000383;1.05e-07;31!UBERON:0000305;1.62e-07;7!UBERON:0001723;7.31e-07;3!UBERON:0001033;7.31e-07;3!UBERON:0003124;8.59e-07;3!UBERON:0000920;8.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.60e-19,14;UBERON:0000158,3.60e-19,14;UBERON:0000478,1.30e-17,24;UBERON:0001737,6.81e-16,9;UBERON:0003124,7.42e-14,7;UBERON:0001557,4.53e-12,19;UBERON:0001987,1.03e-08,4;UBERON:0004340,1.03e-08,4;UBERON:0000305,1.64e-07,7;UBERON:0001723,7.53e-07,3;UBERON:0001033,7.53e-07,3;UBERON:0010056,7.53e-07,3;UBERON:0000920,8.44e-07,3 | |||
|phase1_expression=2.72517568905835,2.35510576280081,0.986680828671798,4.00293193412522,3.5756887554183,34.8935409640147,0,0,0,0.982935746006035,1.39560233594486,31.8924403310052,29.5419015615868,0.37129905888014,0.662794751455832,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,1.54816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0,0,2.91980922181582,0.0945348171640679,0,0,0.261958150995425,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0.326923806226917,1.51357427644931,13.82822218752,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,1.97529702878181,0.725627385107593,0,0,0,0,0,0,0,8.04486240270938,7.41772636343647,7.23033089650446,9.1543997367887,10.0224544282507,8.06720104977729,11.9999864262546,8.43752300038988,8.0796902958742,0,4.20725321410337,3.2925920906512,17.641045366265,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,2.87024179991442,0.651616610620649,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0.87192013766656,0,0,0,0,0,0,0,0,0,0.57191197463259,109.06694268368,2.46972101034231,0,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,3.90909528002464,8.21905290201534,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,1.00034104211935,0.813795071099207,0,0,0,0,1.20378439891088,0,5.17365356462525,0,0.368738337083406,0,28.9785713044856,54.9029478097369,0,0,0,46.9847735741702,93.2038461258784,41.7298604794959,2.23297027036899,0.306923946576125,5.61320188866147,2.56278298511402,1.02341449813341,1.93024705372329,14.8418066444991,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,2.27466768141793,0.340187410553031,0.431831832204279,9.25363516141736,0,1.50506932156456,0,0,0,0,0,0,0.656029291399411,0.325378394664303,1.854738209659,0,0,0,0.650060246036521,0,1.93341436584244,1.69453478826109,4.45160656705776,2.20538515975249,0.537101224341368,3.77043404176994,2.04543905798642,12.6425490618367,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.38126038784765,0.255897791311334,1.28381696410176,0,0,0,0.54907405947211,0,0,0,0,3.41343617362713,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.785992328104969,0,0,0,0.658589785919804,1.89736586882858,1.39973888097993,0,0,0,2.44773882019626,0,0,2.21715076768338,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,81.4118692955523,46.3264902098916,195.047045833012,0,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,4.53478946137697,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0.1137934482855,0,1.65471377237555,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,16.6051642158078,6.7361370591645,67.6282458631669,3.75550132947635,227.605849359957,0,0,0,0.225595660617181,0.392125068635479,0,0,0,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0,32.9056835392503,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0.0967563312890851,0,0,0.775912131907355,0,2.03382666702479,0,0,0,0.391102765469606,0,0.213452994739353,94.5099453323476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0.599037001496973,1.28767814440971,0.669514372325618,2.5529719544956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,2.04572893726493,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0.879313402068495,50.3526177866441,0,0,0,0,0.106787412567695,1.72924735609633,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.801443762484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22077260032973,0,3.12691953050377,0,2.18419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.733714394086716,25.8777492176758,0,0,0,0.376051641746286,0,1.56302802246618,19.6430020861067,0,1.18284868973636,0,0,0,0,0,0.548257766857182,3.96968942711435,0,0.127762427639595,0,0,0,0,7.62840383398694,0,0.857440047187092,0,0,0,0,0.313972371402056,0,4.20408244970683,2.73947616152849,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,6.64409918777745,0,0,0,0,0,8.41657488344263,7.69971051421853,17.397216470073,13.1141968125968,0,0,0,0,0,0,0,2.18559560503957,0,0.490296643507811,0,0,0,1.2679671827502,0.169927114687817,0,2.38494185502236,0,1.60698544745092,0,0,0,0.458729283404541,0,0,0,0,11.6385904913388,0.371995018166751,0.462175628631418,12.5461703015899,0,0.327796715891087,0.126698501011437,0,0,0.0918948995348449,0,0.530450887527676,0.267964130156178,0,0,7.24995538463335,9.28451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| |||
|short_description=p12@H19 | |||
}} |
Revision as of 06:07, 11 January 2014
Short description: | p12@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -83bp_to_ENST00000439725_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.02e-18 | 19 |
cell of skeletal muscle | 2.76e-08 | 9 |
placental epithelial cell | 3.56e-07 | 3 |
chorionic membrane mesenchymal stem cell | 8.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.60e-19 | 14 |
membranous layer | 3.60e-19 | 14 |
extraembryonic structure | 1.30e-17 | 24 |
larynx | 6.81e-16 | 9 |
chorion | 7.42e-14 | 7 |
upper respiratory tract | 4.53e-12 | 19 |
placenta | 1.03e-08 | 4 |
allantois | 1.03e-08 | 4 |
amnion | 1.64e-07 | 7 |
tongue | 7.53e-07 | 3 |
gustatory system | 7.53e-07 | 3 |
future tongue | 7.53e-07 | 3 |
egg chorion | 8.44e-07 | 3 |