FFCP PHASE1:Hg19::chr11:2016402..2016414,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3921 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6502 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC010054,BC010055_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_2_at_RPSA_5end | |||
|id=chr11:2016402..2016414,+ | |||
|ontology_enrichment_celltype=CL:0000188!4.49e-13!9;CL:0000349!1.27e-07!3;CL:0002577!1.27e-07!3;CL:0002541!2.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.22e-20;19!CL:0002537;3.45e-10;5!CL:0002541;4.75e-08;3!CL:0002577;5.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.28e-20,19;CL:0002537,3.45e-10,5;CL:0002541,4.75e-08,3;CL:0002577,5.09e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.93e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.28e-20!14;UBERON:0000158!1.28e-20!14;UBERON:0001737!1.29e-18!9;UBERON:0003124!9.20e-15!7;UBERON:0001557!6.14e-14!19;UBERON:0000478!9.92e-13!24;UBERON:0001987!5.14e-09!4;UBERON:0004340!5.14e-09!4;UBERON:0004923!3.70e-08!57;UBERON:0000305!4.47e-08!7;UBERON:0003104!6.90e-08!238;UBERON:0009142!6.90e-08!238;UBERON:0000476!2.03e-07!3;UBERON:0000920!2.03e-07!3;UBERON:0001723!5.07e-07!3;UBERON:0001033!5.07e-07!3;UBERON:0010056!5.07e-07!3;UBERON:0004871!5.42e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.72e-25;9!UBERON:0001557;1.72e-25;9!UBERON:0005631;2.66e-18;10!UBERON:0000158;2.66e-18;10!UBERON:0000478;5.33e-16;24!UBERON:0000305;4.77e-12;7!UBERON:0005406;2.16e-11;2!UBERON:0003124;4.75e-08;3!UBERON:0000920;4.75e-08;3!UBERON:0001134;3.43e-07;16!UBERON:0002036;3.43e-07;16!UBERON:0000072;6.19e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.63e-25,9;UBERON:0005631,1.09e-22,14;UBERON:0000158,1.09e-22,14;UBERON:0000478,5.54e-16,24;UBERON:0001557,3.67e-15,19;UBERON:0003124,2.38e-12,7;UBERON:0000305,5.42e-12,7;UBERON:0005406,2.11e-11,2;UBERON:0004871,1.68e-10,8;UBERON:0000920,4.75e-08,3;UBERON:0008947,5.81e-07,38;UBERON:0003258,5.81e-07,38;UBERON:0000072,7.38e-07,47 | |||
|phase1_expression=0.54503513781167,0,0,1.0007329835313,0.446961094427288,8.72338524100369,0,0,0,0,1.39560233594486,1.09220686065086,0.791300934685361,0.495065411840187,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.85443159085912,0.964044119533928,0.992645754591546,1.08939722046203,1.66089433377768,2.02246962240247,2.5508790466295,3.07797725557112,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.979005787313703,4.46086450954113,0,0,0,35.1627982877661,9.98612637062982,0.907170879989041,0.496215615637554,0,0.841980283299221,0.128139149255701,0,0,7.42090332224955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.580024309752732,1.07834031980251,1.68854042198743,0.827019434907183,0.107420244868274,0.725083469571143,0.170453254832202,1.33548053470106,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491245205065606,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.0872002112909,32.072185529925,34.0948379330148,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.359030577639089,0.651884231532048,47.8501739597879,0.457987967009312,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.19124204077799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30027555648885,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0.539124056983409,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924205329202706,0,0,0,0,0,0,4.45241380618418,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0.342976018874837,0,0,0,0,0,0,1.96190514319652,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0.647428837187895,0.102662806856247,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,2.1161073620616,0,0.462175628631418,3.02838593486652,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0.404234377916439,0.653150243690884,2.39563310759697,0,0,1.99596213927608,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@RPSA | |||
}} |
Revision as of 06:06, 11 January 2014
Short description: | p2@RPSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPSA_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_BC010054, BC010055_5end |
EntrezGene: | RPSA |
HGNC: | 6502 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.28e-20 | 19 |
amnion mesenchymal stem cell | 3.45e-10 | 5 |
chorionic membrane mesenchymal stem cell | 4.75e-08 | 3 |
placental epithelial cell | 5.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.63e-25 | 9 |
extraembryonic membrane | 1.09e-22 | 14 |
membranous layer | 1.09e-22 | 14 |
extraembryonic structure | 5.54e-16 | 24 |
upper respiratory tract | 3.67e-15 | 19 |
chorion | 2.38e-12 | 7 |
amnion | 5.42e-12 | 7 |
perirenal fat | 2.11e-11 | 2 |
somatic layer of lateral plate mesoderm | 1.68e-10 | 8 |
egg chorion | 4.75e-08 | 3 |
respiratory primordium | 5.81e-07 | 38 |
endoderm of foregut | 5.81e-07 | 38 |
segment of respiratory tract | 7.38e-07 | 47 |