FFCP PHASE1:Hg19::chr10:105344681..105344723,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7761 | |||
|TSSclassifier=strong | |||
|UniProt=B4DS86 | |||
|association_with_transcript=0bp_to_AK299620_5end | |||
|description=CAGE_peak_7_at_NEURL_5end | |||
|id=chr10:105344681..105344723,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.41e-13!57;UBERON:0005068!5.41e-13!57;UBERON:0006241!5.41e-13!57;UBERON:0007135!5.41e-13!57;UBERON:0002780!5.79e-13!41;UBERON:0001890!5.79e-13!41;UBERON:0006240!5.79e-13!41;UBERON:0003080!2.42e-12!42;UBERON:0001893!5.51e-12!34;UBERON:0002020!8.57e-12!34;UBERON:0003528!8.57e-12!34;UBERON:0002791!2.02e-11!33;UBERON:0001869!2.31e-11!32;UBERON:0003075!8.83e-11!86;UBERON:0007284!8.83e-11!86;UBERON:0003056!1.18e-10!61;UBERON:0002616!2.47e-10!59;UBERON:0005743!4.52e-10!86;UBERON:0002346!6.48e-10!90;UBERON:0001017!1.04e-09!82;UBERON:0000955!9.64e-09!69;UBERON:0006238!9.64e-09!69;UBERON:0007023!1.74e-08!115;UBERON:0000153!2.30e-08!129;UBERON:0007811!2.30e-08!129;UBERON:0001737!2.59e-08!9;UBERON:0000073!3.30e-08!94;UBERON:0001016!3.30e-08!94;UBERON:0000064!5.88e-08!219;UBERON:0002619!5.98e-08!22;UBERON:0001557!1.07e-07!19;UBERON:0000956!1.29e-07!25;UBERON:0000203!1.29e-07!25;UBERON:0000033!3.65e-07!123;UBERON:0001950!5.47e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.12e-15;9!UBERON:0001557;2.12e-15;9!UBERON:0001869;4.53e-09;32!UBERON:0002791;3.83e-08;32!UBERON:0003528;4.83e-08;34!UBERON:0002020;4.83e-08;34!UBERON:0000369;5.15e-08;4!UBERON:0002435;5.15e-08;4!UBERON:0000204;5.15e-08;4!UBERON:0001893;7.01e-08;34!UBERON:0002780;9.62e-08;41!UBERON:0001890;9.62e-08;41!UBERON:0002619;5.61e-07;22!UBERON:0000473;6.16e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.71e-15,9;UBERON:0001557,2.08e-11,19;UBERON:0002780,1.07e-09,41;UBERON:0001890,1.07e-09,41;UBERON:0003080,1.07e-09,41;UBERON:0006240,1.07e-09,41;UBERON:0001869,1.32e-09,32;UBERON:0001049,3.03e-09,56;UBERON:0005068,3.03e-09,56;UBERON:0006241,3.03e-09,56;UBERON:0007135,3.03e-09,56;UBERON:0000073,4.91e-09,53;UBERON:0002616,4.91e-09,53;UBERON:0001893,8.20e-09,34;UBERON:0003528,1.01e-08,34;UBERON:0002020,1.01e-08,34;UBERON:0001017,1.05e-08,81;UBERON:0002791,2.34e-08,32;UBERON:0003056,3.93e-08,61;UBERON:0000369,5.94e-08,4;UBERON:0002435,5.94e-08,4;UBERON:0000204,5.94e-08,4;UBERON:0010082,5.94e-08,4;UBERON:0001016,6.05e-08,89;UBERON:0000955,2.14e-07,68;UBERON:0006238,2.14e-07,68;UBERON:0003075,3.73e-07,82;UBERON:0007284,3.73e-07,82;UBERON:0000473,6.06e-07,8;UBERON:0002619,8.33e-07,22 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,1.30592814099919,0.245733936501509,2.09340350391728,1.74753097704138,0.791300934685361,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0.383829398097213,0,0,0,0,0,0,4.11040615068786,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,1.91136614062614,2.64342657158052,0,4.47752944117631,1.37696839079683,1.57204305099666,1.02800749499755,1.00311897234407,0.32592226663359,1.4203434172042,0,1.55974639639243,1.47302953737419,0.664601683750863,0.812411591295047,2.17755243533648,1.8208308658383,2.79544437826249,3.03985019564433,2.31842468588042,2.22429844743091,2.40786745280742,1.04535523804977,3.28597093822942,3.44898444241729,1.37450978193052,0.253019692019503,0.318565414324097,0,0.950452044448374,0.451725357233318,0.127986611154418,0,0,0,1.20964045934839,1.33720097891754,0.289648807765598,0,0,1.79007586580942,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.851363990735132,1.09288586487763,0.370784442784429,0.649094787309367,0.522389211897802,0.531831842075461,2.8618874916641,1.14398982156026,2.22874500797739,0.39752481473341,0.860234595106124,0,0.56530794192401,0,1.37559020970034,0.208994966536811,0,1.06729878806013,0,0.805658634218294,0,0,0,0,0.625098097988558,0.898117490504679,0.563057402416611,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0,0,1.40592859100278,0,1.1409436430889,0.149448680551801,1.05691048779388,1.94247533241758,2.38766371393822,0.204154171254893,0.737005903870608,0.826606249406124,0,0.741800787835671,0.910161361938026,0,0.841680569770331,0.750711119231785,0.831192346452549,0.877955241761676,0,1.50238058906597,0.226864366320042,0.538168907066586,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0.276149695926898,0.80823028409406,0,0.10075209822764,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,3.66751080123516,2.19160097101532,2.6511213287183,2.31617342738027,2.61455332910887,2.13543557199987,2.96628877952362,5.101758093259,3.46272441251751,0,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.277765335475589,1.62904152655162,0,0,0,0,1.15493158208859,0.925971025153221,0.570762456703795,0,0,0,0.234004265139238,0.445893486866185,0,0,0.283550194484773,0,0,0,0,0.176096868026452,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0.410952645100767,0,0,0.394061520403854,0.646882724578552,0.256686072559497,1.01637849688985,0,0,2.01019518401218,1.27587750330633,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.946214490203608,0,0,0,1.03473071292505,0,0,0.173767228936166,0.587403472388222,0,0.413536052245775,0.647142602455851,1.38745825144478,0,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0.308419387605311,0.532685175939381,0.410635780069046,0,0.581051892299796,0,0.200506470303285,0.552485933615378,0,0,0,0.902399225814824,0.693138033939733,0.784349769176855,0,0,2.27466768141793,0.680374821106063,1.72732732881711,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0.656029291399411,0,0,2.01452822600355,1.48517099857058,0,0,0,0.96670718292122,0,0.614014698904518,1.24052915236078,0.644521469209642,0.870100163485371,0.340906509664404,0.0890320356467374,0.165284915360978,0,0,0.6069466851333,0,0,0,0,0,0,0.55597265731176,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,1.31178950409327,0,0.30982349809975,0,0.286822704408103,0,0,0,0.422215270595328,0,0.75894634753143,1.39973888097993,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0.459446800413919,1.01489521846434,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0.962479855263359,0.245040215981032,0,0,0,10.0438551819158,3.99158742865633,0.383010740264733,0,10.3879020887858,0,0,0,0,0,0,0,0,0,11.6751490437214,9.8417487472663,9.34355193586688,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0.552567831062295,2.26739473068848,0,0,0,0,0,0,0,0,0,0,0.834912883456661,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,5.31444831488303,2.17073589525734,0,0,1.47773809476774,0.87754158861589,2.39664619741778,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.471807930864739,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| |||
|short_description=p7@NEURL | |||
}} |
Revision as of 04:48, 11 January 2014
Short description: | p7@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NEURL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK299620_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | B4DS86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.71e-15 | 9 |
upper respiratory tract | 2.08e-11 | 19 |
regional part of forebrain | 1.07e-09 | 41 |
forebrain | 1.07e-09 | 41 |
anterior neural tube | 1.07e-09 | 41 |
future forebrain | 1.07e-09 | 41 |
cerebral hemisphere | 1.32e-09 | 32 |
neural tube | 3.03e-09 | 56 |
neural rod | 3.03e-09 | 56 |
future spinal cord | 3.03e-09 | 56 |
neural keel | 3.03e-09 | 56 |
regional part of nervous system | 4.91e-09 | 53 |
regional part of brain | 4.91e-09 | 53 |
telencephalon | 8.20e-09 | 34 |
brain grey matter | 1.01e-08 | 34 |
gray matter | 1.01e-08 | 34 |
central nervous system | 1.05e-08 | 81 |
regional part of telencephalon | 2.34e-08 | 32 |
pre-chordal neural plate | 3.93e-08 | 61 |
corpus striatum | 5.94e-08 | 4 |
striatum | 5.94e-08 | 4 |
ventral part of telencephalon | 5.94e-08 | 4 |
future corpus striatum | 5.94e-08 | 4 |
nervous system | 6.05e-08 | 89 |
brain | 2.14e-07 | 68 |
future brain | 2.14e-07 | 68 |
neural plate | 3.73e-07 | 82 |
presumptive neural plate | 3.73e-07 | 82 |
testis | 6.06e-07 | 8 |
regional part of cerebral cortex | 8.33e-07 | 22 |