FFCP PHASE1:Hg19::chr10:99531749..99531764,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6425 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10779 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T4F7 | |||
|association_with_transcript=0bp_to_NM_003015,uc001kor.3_5end | |||
|description=CAGE_peak_1_at_SFRP5_5end | |||
|id=chr10:99531749..99531764,- | |||
|ontology_enrichment_celltype=CL:0000188!1.29e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.72e-10;9!CL:0002322;1.27e-08;5!CL:0002586;5.75e-08;3!CL:0000625;5.03e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.10e-10,9;CL:0002322,2.34e-08,5;CL:0002586,5.78e-08,3;CL:0000625,6.63e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-37!115;UBERON:0003075!6.64e-13!86;UBERON:0007284!6.64e-13!86;UBERON:0005743!5.51e-12!86;UBERON:0002346!1.01e-11!90;UBERON:0000073!3.61e-10!94;UBERON:0001016!3.61e-10!94;UBERON:0001049!3.78e-10!57;UBERON:0005068!3.78e-10!57;UBERON:0006241!3.78e-10!57;UBERON:0007135!3.78e-10!57;UBERON:0001017!2.03e-09!82;UBERON:0000481!1.52e-08!347;UBERON:0003076!2.32e-08!15;UBERON:0003057!2.32e-08!15;UBERON:0002616!1.29e-07!59;UBERON:0000966!2.77e-07!5;UBERON:0005388!2.77e-07!5;UBERON:0001802!2.77e-07!5;UBERON:0000955!7.87e-07!69;UBERON:0006238!7.87e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.10e-11;5!UBERON:0005388;1.10e-11;5!UBERON:0001802;1.10e-11;5!UBERON:0001134;1.03e-08;16!UBERON:0002036;1.03e-08;16!UBERON:0001781;5.75e-08;3!UBERON:0001782;5.75e-08;3!UBERON:0001896;3.65e-07;3!UBERON:0005290;3.65e-07;3!UBERON:0006947;5.28e-07;3!UBERON:0004054;5.28e-07;3!UBERON:0000922;6.72e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.95e-23,114;UBERON:0000966,1.40e-09,6;UBERON:0005388,1.40e-09,6;UBERON:0001802,1.40e-09,6;UBERON:0001782,5.78e-08,3;UBERON:0005424,5.78e-08,3;UBERON:0001896,3.17e-07,3;UBERON:0005290,3.17e-07,3;UBERON:0010096,3.17e-07,3;UBERON:0006947,5.30e-07,3;UBERON:0004054,5.30e-07,3;UBERON:0002240,7.32e-07,3;UBERON:0005174,7.32e-07,3;UBERON:0001137,7.32e-07,3 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,1.27426165729639,1.30216690771284,0,0.752875595388864,1.02389288923535,2.49861453104692,1.89421801635213,1.64225599384209,0.80642697289893,0,1.15859523106239,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,1.06023814657188,1.51052125730374,1.24393266018445,1.51392510525377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,13.2307840246988,0,0,3.54473944008842,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,10.9805895619474,0.206768026122887,0.862856803274467,0,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,64.3689814042137,46.2500650436585,59.8696246182318,1.64865618636356,0,0,0,0,0,2.32009723901093,1.3864375540318,5.2191249406884,7.30533834168012,0.214840489736547,3.48040065394148,8.86356925127449,4.09547363974992,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,2.50634477090067,0,0,0,1.27753871307098,0,0,0,0,0,0,12.3087398947712,4.05683517713975,0,1.4098700508785,0,0.879049075631364,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0.597743964753209,1.65770349318689,0,0,0,0,0,0,0,2.76201535783414,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.361789315876224,0,0.442317039724898,0.591095237907095,1.97446857438575,0,0,3.53971189117467,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.706765357169704,0,1.99052386215701,15.4800737880844,3.66618086960175,0,0,0,1.55022605855557,4.01288823649394,0.702793337176017,0,0.19566461893209,0,14.5996229054275,10.8891644443797,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,6.9832091871662,0,30.7333807461524,0,0,0,0,0,54.8574196480136,0.19980960958213,0,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,1.36905378891993,0,0.859530882839914,0,6.42349522926185,1.14580212005842,0,0.998395002494955,1.71690419254628,3.79391477651183,1.5452198671947,0,0,0.0787831823072236,0.329663433524666,0.337017719270924,0.688992370603241,0,0,1.63444087333891,0.643012593860077,1.65047323916681,1.24632101408756,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,17.8673831593342,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0.113312091520126,3.3707013745959,13.2506888912221,1.68067843270016,0.66116300871345,0,0,2.66968531419237,3.77290332239198,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,9.74795632673121,11.2038342052221,2.98062734118641,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,1.49837315502381,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.760729777106397,0.322951291263702,0,0,0.471878893390961,0,0,0,0,0,0.225630985047772,0,42.201756606587,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,21.3820529074301,4.96211178389294,0,0,1.60710550763486,3.69912094440706,0,0.227662191351298,0,0,0,0.339848664884159,0.328863867814245,0,0,2.04082041411336,0.157115589916002,0,5.47895232305697,0,0,115.22018921277,2.05417695252545,2.20858708199438,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,5.9739783241312,0,0.718639647993729,1.1598144313382,0.485710993059139,0.701818390386317,9.54963720774568,5.23248399421302,0,0.109940516745429,0.301925687133347,25.6989946499456,3.0598338470554,0,1.47088993052343,0,1.76677620403451,3.86160320425212,8.8757702792514,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,6.45028124181531,0,0.407948941145488,0,16.3998320559774,0.371995018166751,0,0,0,0,4.94124153944604,0.203977659483963,0.26721740526556,0,0,1.13668047327359,0.267964130156178,0.829169439458779,0.620597975171371,1.70587185520785,0.23806443146374,0.258355639344024,0.434523000071005,0,0.381882949668989,0.202117188958219,3.04803447055746,2.39563310759697,0.202056159043763,2.438554983351,2.99394320891412,0.162806537221949,0,0,0,2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| |||
|short_description=p1@SFRP5 | |||
}} |
Revision as of 04:27, 11 January 2014
Short description: | p1@SFRP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFRP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_003015, uc001kor.3_5end |
EntrezGene: | SFRP5 |
HGNC: | 10779 |
UniProt: | Q5T4F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.10e-10 | 9 |
embryonic stem cell | 2.34e-08 | 5 |
retinal pigment epithelial cell | 5.78e-08 | 3 |
CD8-positive, alpha-beta T cell | 6.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.95e-23 | 114 |
retina | 1.40e-09 | 6 |
photoreceptor array | 1.40e-09 | 6 |
posterior segment of eyeball | 1.40e-09 | 6 |
pigmented layer of retina | 5.78e-08 | 3 |
presumptive retinal pigmented epithelium | 5.78e-08 | 3 |
medulla oblongata | 3.17e-07 | 3 |
myelencephalon | 3.17e-07 | 3 |
future myelencephalon | 3.17e-07 | 3 |
male genital duct | 5.30e-07 | 3 |
internal male genitalia | 5.30e-07 | 3 |
spinal cord | 7.32e-07 | 3 |
dorsal region element | 7.32e-07 | 3 |
dorsum | 7.32e-07 | 3 |