FFCP PHASE1:Hg19::chr10:17276801..17276827,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000456355_5end | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_5_at_ENST00000456355_5end | |||
|id=chr10:17276801..17276827,- | |||
|ontology_enrichment_celltype=CL:0000055!1.35e-24!180;CL:0002371!3.98e-22!591;CL:0000144!1.51e-20!625;CL:0000048!2.41e-17!430;CL:0000723!3.04e-16!436;CL:0000034!2.06e-15!444;CL:0000057!3.06e-15!75;CL:0000548!2.42e-14!679;CL:0000004!2.42e-14!679;CL:0000255!2.42e-14!679;CL:0000012!2.85e-14!682;CL:0000222!7.24e-13!119;CL:0000680!2.68e-10!57;CL:0000056!2.68e-10!57;CL:0000355!2.68e-10!57;CL:0000183!2.81e-10!59;CL:0000187!9.07e-10!54;CL:0002320!1.51e-09!365;CL:0000003!1.76e-09!722;CL:0000393!4.74e-09!60;CL:0000211!4.74e-09!60;CL:0002620!2.96e-08!23;CL:0000192!3.37e-08!42;CL:0000514!3.37e-08!42;CL:0000134!4.36e-08!358;CL:0000219!8.59e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.53e-09;23!CL:0000057;1.65e-07;73!CL:0000134;6.52e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.63e-20,427;CL:0000723,5.27e-19,433;CL:0000057,7.41e-18,76;CL:0000034,1.60e-17,441;CL:0002320,6.90e-12,361;CL:0000222,1.55e-11,121;CL:0000680,1.58e-10,58;CL:0000056,1.58e-10,58;CL:0000355,1.58e-10,58;CL:0000187,2.58e-10,55;CL:0000134,4.21e-10,354;CL:0002620,2.58e-09,23;CL:0000219,3.66e-09,386;CL:0000393,8.10e-09,61;CL:0000211,8.10e-09,61;CL:0000192,9.28e-08,43;CL:0000514,9.28e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.86e-15!167;UBERON:0003081!8.56e-15!216;UBERON:0000914!6.63e-14!83;UBERON:0002329!6.63e-14!83;UBERON:0003077!6.63e-14!83;UBERON:0003059!6.63e-14!83;UBERON:0007282!6.63e-14!83;UBERON:0009618!6.63e-14!83;UBERON:0007285!6.63e-14!83;UBERON:0002049!8.41e-13!79;UBERON:0007798!8.41e-13!79;UBERON:0004290!2.16e-12!70;UBERON:0000926!5.66e-12!448;UBERON:0004120!5.66e-12!448;UBERON:0006603!5.66e-12!448;UBERON:0004872!1.73e-11!84;UBERON:0004535!1.77e-11!110;UBERON:0000486!5.60e-11!82;UBERON:0001009!8.87e-11!113;UBERON:0000055!1.48e-10!69;UBERON:0001981!3.73e-10!60;UBERON:0007500!3.73e-10!60;UBERON:0004537!3.73e-10!60;UBERON:0006965!3.73e-10!60;UBERON:0001637!7.11e-10!42;UBERON:0003509!7.11e-10!42;UBERON:0004572!7.11e-10!42;UBERON:0002384!1.29e-09!375;UBERON:0001134!1.00e-08!61;UBERON:0002036!1.00e-08!61;UBERON:0003082!1.00e-08!61;UBERON:0000468!1.02e-08!659;UBERON:0002385!3.80e-08!63;UBERON:0001015!3.80e-08!63;UBERON:0000383!3.80e-08!63;UBERON:0004573!1.24e-07!33;UBERON:0004571!1.24e-07!33;UBERON:0002199!4.57e-07!45;UBERON:0002416!4.57e-07!45;UBERON:0004765!4.59e-07!101;UBERON:0001434!4.59e-07!101;UBERON:0005256!6.62e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.25e-08;14!UBERON:0001637;7.62e-08;42!UBERON:0003509;7.62e-08;42!UBERON:0004572;7.62e-08;42!UBERON:0004573;1.11e-07;33!UBERON:0004571;1.11e-07;33!UBERON:0002067;1.67e-07;9!UBERON:0002199;8.11e-07;46!UBERON:0002416;8.11e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.40e-21,315;UBERON:0004120,6.40e-21,315;UBERON:0006603,6.40e-21,315;UBERON:0002204,1.85e-16,167;UBERON:0007524,3.53e-14,73;UBERON:0007503,3.84e-14,78;UBERON:0002329,5.18e-14,71;UBERON:0003059,5.18e-14,71;UBERON:0007282,5.18e-14,71;UBERON:0004290,5.18e-14,71;UBERON:0009618,5.18e-14,71;UBERON:0003077,1.44e-13,72;UBERON:0007285,1.44e-13,72;UBERON:0003081,1.35e-12,203;UBERON:0002049,6.31e-12,78;UBERON:0007798,6.31e-12,78;UBERON:0002384,9.82e-12,371;UBERON:0000486,2.87e-11,83;UBERON:0004535,6.43e-11,109;UBERON:0004872,1.06e-10,83;UBERON:0001637,1.12e-10,42;UBERON:0003509,1.12e-10,42;UBERON:0004572,1.12e-10,42;UBERON:0001009,4.25e-10,112;UBERON:0002199,8.99e-10,46;UBERON:0002416,8.99e-10,46;UBERON:0000055,1.07e-09,68;UBERON:0001134,1.82e-09,62;UBERON:0002036,1.82e-09,62;UBERON:0003082,1.82e-09,62;UBERON:0007500,3.69e-09,59;UBERON:0001981,3.69e-09,59;UBERON:0004537,3.69e-09,59;UBERON:0006965,3.69e-09,59;UBERON:0002385,9.20e-09,64;UBERON:0001015,9.20e-09,64;UBERON:0000383,9.20e-09,64;UBERON:0001013,1.12e-08,14;UBERON:0004573,2.20e-08,33;UBERON:0004571,2.20e-08,33;UBERON:0002067,1.49e-07,9;UBERON:0004016,1.49e-07,9;UBERON:0010083,1.49e-07,9;UBERON:0000490,1.83e-07,148;UBERON:0001434,3.14e-07,100;UBERON:0002097,3.26e-07,41;UBERON:0003104,9.94e-07,160;UBERON:0009142,9.94e-07,160 | |||
|phase1_expression=1.2717486548939,2.14100523890983,0.281908808191942,2.00146596706261,1.34088328328186,5.23403114460221,7.59899634504932,2.52687949370732,3.3954131665979,0.737201809504527,0,0,0.791300934685361,5.44571953024205,10.2733186475654,4.70627602516243,1.20538905604795,2.19093027116212,1.46379839637152,0.738726348460727,3.87601313364081,5.95563970808367,4.86601178122796,2.32686522623903,3.26410862946487,0.0764134057479513,0,0,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0,0,0,0,0.553995408531877,1.60435557976113,1.95309783644267,0.223915474239924,0,0,1.30858414901608,0.377875943688809,0.727752183563449,1.39457422143411,1.23350366406548,1.85823822537062,3.74000110018796,1.5369642391746,2.83778675866302,3.44745680736619,1.93645405075148,4.06279459783025,2.82363509313907,2.18324920046277,1.57306439111559,4.28517449319264,0.962787081228281,1.91801137739712,1.31940520074686,0.199463657621632,0.852449501065388,5.80418477257168,4.53908179752912,1.24564449799115,2.76373531782418,0.521482918420201,0.868755378820466,4.23779651843358,1.47311054395026,2.53169909952708,0.211255286311942,1.06302149982522,0.838634582033504,0.561643155732475,1.80212271409808,0,0.285012743741249,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0.790152254325231,0,0.786021525498329,0.411202997999018,0,0,0,0,0.222820913770347,0,0.443067789167242,0,1.5370958367081,0.910415432919148,1.31550323682941,1.10540007114339,0.579606171470105,0.296573126324121,0,0,0.453237370790265,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,2.01210257911091,2.30152611318355,3.97583067623023,0.50133791063589,7.53201898596283,0,2.91980922181582,2.55244006342983,4.65631734671384,2.72287835648691,0.130979075497713,0,0.741568885568859,1.62273696827342,1.0447784237956,2.52620124985844,0.476981248610684,0,0,0.39752481473341,1.72046919021225,2.42998351125316,0.56530794192401,3.35599548967925,6.60283300656162,1.8809546988313,3.6178346283706,0.71153252537342,0,9.66790361061953,1.52054421143703,7.56592378399325,1.47065232138347,13.7724131139899,0.446498641420399,0.673588117878509,0.900891843866578,0,0.949265659568129,2.38162267109529,0,0,0,2.48485975847659,1.39293562831038,2.51577443545116,4.58938593198102,3.54668382198357,1.12135520028461,2.1349799145941,3.7000132262574,0.311211035399766,2.02066008104532,1.47115712802113,0.151357427644931,2.30470369792,0,7.49184184392769,1.71141546463335,13.3009325691103,3.99277295388801,3.0755859429945,3.23036855415172,1.02077085627447,11.9149287792415,2.6864703105699,3.56400857184616,5.93440630268536,0,4.31170885089743,6.22843621630045,1.25118519871964,0.554128230968366,3.07284334616587,9.19463387397059,3.00476117813194,2.94923676216055,7.35497506324334,1.2813443329114,1.27159140695737,10.5031883629541,0.92747276314595,9.27505944164265,2.60563598864226,3.03797398034279,2.04617710838517,10.6022185182528,2.30124746605748,1.93975268182574,6.74518225781567,1.30977727695932,3.05209066158878,0.193260853163297,0,0.573609190778008,0.365921118388786,0.265059536642971,0.116193942869518,0.10366105501537,0,0,4.69348596989448,13.5080597020506,4.14404764057442,3.71494342425583,12.9938306700525,0.946454400318751,0.168584690078102,0.482022059766964,0.661763836394364,0.435758888184812,0,0.674156540800822,0.588664395376038,0.38474715694639,0.738155454624648,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,0.441463099414651,0,1.54411029268673,0.439001141634502,0,0.201057944823262,0.185176890317059,0.325808305310325,4.15973914111831,1.44331342025273,6.26024186865415,0.939269553886573,1.44366447761074,3.24089858803628,3.42457474022277,0,0,1.72351904261178,1.40402559083543,2.22946743433092,0,0.16798212819886,0.283550194484773,1.97028749946266,0.290633938513962,0.766765358330422,0,0.44024217006613,0.621984346622316,0.144119953416961,0.25248486685276,0.952468414382536,0,0,1.71072446022705,1.13110241973656,2.70308752059526,0.285826432630578,0.224262168690721,0,0.80672114403045,1.16344544182,0,8.45302752556,2.92531928243358,5.2003718455683,1.28603687131071,2.83698264046557,2.93064396917709,0.857867961948885,3.25572963234866,2.46972101034231,4.88604276440603,0.355391948742546,3.95975936466715,1.50719688529793,0,1.59956785891291,2.43247561282381,0.502257091432126,2.10833939483032,4.31324739884849,2.29723871668228,0,1.73737568001095,2.4657158706046,0.895304816199478,0.224170287987055,0.197030760201927,0.646882724578552,0.513372145118994,0.254094624222463,0,3.09315525111078,0.837581326671744,0.637938751653163,0,0,0,3.80343624329334,9.00306937907419,7.32415563989286,4.78332981520856,4.28229573113188,3.78485796081443,2.57711112983969,0.601892199455438,2.27407504055985,10.3473071292505,0.664225598535437,1.47495334833363,4.77859879574456,0.391602314925481,1.37257369524342,0,0.431428401637234,0.213455115606889,0.606255142892519,0,3.62868351995616,1.48864684691266,1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| |||
|short_description=p5@ENST00000456355 | |||
}} |
Revision as of 01:58, 11 January 2014
Short description: | p5@ENST00000456355 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000456355_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 4bp_to_ENST00000456355_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.63e-20 | 427 |
somatic stem cell | 5.27e-19 | 433 |
fibroblast | 7.41e-18 | 76 |
stem cell | 1.60e-17 | 441 |
connective tissue cell | 6.90e-12 | 361 |
mesodermal cell | 1.55e-11 | 121 |
muscle precursor cell | 1.58e-10 | 58 |
myoblast | 1.58e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.58e-10 | 58 |
muscle cell | 2.58e-10 | 55 |
mesenchymal cell | 4.21e-10 | 354 |
skin fibroblast | 2.58e-09 | 23 |
motile cell | 3.66e-09 | 386 |
electrically responsive cell | 8.10e-09 | 61 |
electrically active cell | 8.10e-09 | 61 |
smooth muscle cell | 9.28e-08 | 43 |
smooth muscle myoblast | 9.28e-08 | 43 |