FFCP PHASE1:Hg19::chr1:229478075..229478080,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=133bp_to_AB590449_5end | |||
|description=CAGE_peak_5_at_AB590449_5end | |||
|id=chr1:229478075..229478080,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.92e-26;1!CL:0002567;1.01e-09;3!CL:0000322;1.41e-09;3!CL:0000346;1.41e-09;3!CL:1000428;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.58e-26,1;CL:0002567,1.01e-09,3;CL:0000346,1.10e-09,3;CL:1000428,1.10e-09,3;CL:0000322,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.41e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.07e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.21e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0000955!9.24e-18!69;UBERON:0006238!9.24e-18!69;UBERON:0001017!1.73e-17!82;UBERON:0001049!2.25e-17!57;UBERON:0005068!2.25e-17!57;UBERON:0006241!2.25e-17!57;UBERON:0007135!2.25e-17!57;UBERON:0000073!2.89e-17!94;UBERON:0001016!2.89e-17!94;UBERON:0002616!2.94e-16!59;UBERON:0005743!4.25e-16!86;UBERON:0002020!3.77e-15!34;UBERON:0003528!3.77e-15!34;UBERON:0001869!3.86e-15!32;UBERON:0002780!1.90e-14!41;UBERON:0001890!1.90e-14!41;UBERON:0006240!1.90e-14!41;UBERON:0003080!6.30e-14!42;UBERON:0001893!7.10e-14!34;UBERON:0002791!8.46e-13!33;UBERON:0002619!7.59e-12!22;UBERON:0001950!1.54e-11!20;UBERON:0000956!3.16e-11!25;UBERON:0000203!3.16e-11!25;UBERON:0000200!5.38e-10!6;UBERON:0003075!7.64e-10!86;UBERON:0007284!7.64e-10!86;UBERON:0002346!5.48e-09!90;UBERON:0007023!1.26e-08!115;UBERON:0000153!3.77e-08!129;UBERON:0007811!3.77e-08!129;UBERON:0003056!3.81e-08!61;UBERON:0000033!5.00e-08!123;UBERON:0004121!3.68e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;5.92e-26;1!UBERON:0002771;1.07e-13;2!UBERON:0004903;1.07e-13;2!UBERON:0005406;1.07e-13;2!UBERON:0002173;1.07e-13;2!UBERON:0002186;1.07e-13;2!UBERON:0004821;1.41e-09;3!UBERON:0007499;1.41e-09;3!UBERON:0003215;1.41e-09;3!UBERON:0010368;1.41e-09;3!UBERON:0009911;1.41e-09;3!UBERON:0002299;1.41e-09;3!UBERON:0000412;1.41e-09;3!UBERON:0001992;1.41e-09;3!UBERON:0005383;1.41e-09;3!UBERON:0006524;1.41e-09;3!UBERON:0008874;1.41e-09;3!UBERON:0002169;1.41e-09;3!UBERON:0004894;1.41e-09;3!UBERON:0005382;1.41e-09;3!UBERON:0000369;1.69e-07;4!UBERON:0002435;1.69e-07;4!UBERON:0009856;1.69e-07;4!UBERON:0000204;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,4.61e-26,1;UBERON:0005406,8.28e-14,2;UBERON:0002771,1.07e-13,2;UBERON:0004903,1.21e-13,2;UBERON:0002173,1.21e-13,2;UBERON:0002186,1.21e-13,2;UBERON:0000412,1.10e-09,3;UBERON:0001992,1.10e-09,3;UBERON:0005383,1.30e-09,3;UBERON:0005382,1.30e-09,3;UBERON:0004821,1.54e-09,3;UBERON:0003215,1.54e-09,3;UBERON:0010368,1.54e-09,3;UBERON:0009911,1.54e-09,3;UBERON:0002299,1.54e-09,3;UBERON:0006524,1.54e-09,3;UBERON:0008874,1.54e-09,3;UBERON:0002169,1.54e-09,3;UBERON:0004894,1.54e-09,3;UBERON:0000369,1.59e-07,4;UBERON:0002435,1.59e-07,4;UBERON:0000204,1.59e-07,4;UBERON:0010082,1.59e-07,4 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,2.34434894420094,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.713715955188647,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0.256278298511402,0.511707249066704,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,1.10579259931225,0.591095237907095,0.658156191461918,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.50648636764703,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0.408610218334727,0,0,0,0.2249738915515,0.77380195455795,0.728994679896296,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.517131825446202,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,1.22026264901963,0.500763722825999,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,1.02315497042921,0.107824811396682,0.157265941855896,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.706521476061055,0,0,0,0.504143392443436,0.899044282034833,0.161475645631851,0,0.0981477185010256,0,0,0,0,0.690359926060101,0.596748666348824,0,0,0,0.523813388962845,0,0,0.945526184657525,0,0.206686796501184,0.634158101939068,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0.339848664884159,0.657727735628491,0,0,0,1.25692471932802,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0.594092800654172,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0,0,0.275684698604535,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p5@AB590449 | |||
}} |
Revision as of 00:36, 11 January 2014
Short description: | p5@AB590449 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AB590449_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_AB590449_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.58e-26 | 1 |
light melanocyte | 1.01e-09 | 3 |
hair follicle dermal papilla cell | 1.10e-09 | 3 |
stem cell of epidermis | 1.10e-09 | 3 |
pneumocyte | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
putamen | 4.61e-26 | 1 |
perirenal fat | 8.28e-14 | 2 |
middle temporal gyrus | 1.07e-13 | 2 |
bronchoalveolar duct junction | 1.21e-13 | 2 |
alveolar duct | 1.21e-13 | 2 |
bronchiole | 1.21e-13 | 2 |
dermal papilla | 1.10e-09 | 3 |
papillary layer of dermis | 1.10e-09 | 3 |
caudate-putamen | 1.30e-09 | 3 |
dorsal striatum | 1.30e-09 | 3 |
pulmonary alveolus epithelium | 1.54e-09 | 3 |
alveolus | 1.54e-09 | 3 |
pulmonary lobule | 1.54e-09 | 3 |
lobule | 1.54e-09 | 3 |
alveolus of lung | 1.54e-09 | 3 |
alveolar system | 1.54e-09 | 3 |
pulmonary acinus | 1.54e-09 | 3 |
alveolar sac | 1.54e-09 | 3 |
alveolar wall | 1.54e-09 | 3 |
corpus striatum | 1.59e-07 | 4 |
striatum | 1.59e-07 | 4 |
ventral part of telencephalon | 1.59e-07 | 4 |
future corpus striatum | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.21e-13 | 2 |