FFCP PHASE1:Hg19::chr1:224033596..224033697,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12000 | |||
|TSSclassifier=strong | |||
|UniProt=Q13625,F8WBY9,B4DG66 | |||
|association_with_transcript=0bp_to_ENST00000343537,ENST00000391878,ENST00000465119,NM_001031685,NM_005426,uc001hod.2,uc010pvb.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_TP53BP2_5end | |||
|id=chr1:224033596..224033697,- | |||
|ontology_enrichment_celltype=CL:0000763!3.57e-30!112;CL:0000049!3.57e-30!112;CL:0000037!6.44e-29!172;CL:0000566!6.44e-29!172;CL:0000766!1.17e-27!76;CL:0000988!1.30e-27!182;CL:0002032!1.38e-26!165;CL:0000837!1.38e-26!165;CL:0000738!1.07e-25!140;CL:0000557!8.00e-25!71;CL:0000839!1.38e-23!70;CL:0002057!1.47e-23!42;CL:0002009!2.08e-21!65;CL:0002194!1.83e-20!63;CL:0000576!1.83e-20!63;CL:0000040!1.83e-20!63;CL:0000559!1.83e-20!63;CL:0000860!2.67e-20!45;CL:0002031!7.94e-20!124;CL:0002087!2.07e-17!119;CL:0000219!1.77e-08!390;CL:0000134!4.53e-08!358;CL:0002320!2.50e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.94e-19;33!CL:0002057;6.94e-19;33!CL:0000576;3.15e-15;48!CL:0000473;1.72e-14;39!CL:0000234;1.72e-14;39!CL:0000766;6.13e-13;69!CL:0000763;2.83e-09;100!CL:0002087;4.24e-07;104!CL:0000738;4.38e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.24e-32,108;CL:0000049,4.24e-32,108;CL:0000037,3.02e-30,168;CL:0000766,3.94e-30,72;CL:0000988,1.61e-29,177;CL:0002032,7.09e-28,161;CL:0000837,7.09e-28,161;CL:0000557,3.18e-27,67;CL:0000738,3.98e-27,136;CL:0000839,6.45e-26,66;CL:0002009,1.06e-23,61;CL:0000860,1.47e-23,42;CL:0002057,1.47e-23,42;CL:0002194,9.82e-23,59;CL:0000576,9.82e-23,59;CL:0000040,9.82e-23,59;CL:0000559,9.82e-23,59;CL:0000473,1.33e-21,48;CL:0000234,1.33e-21,48;CL:0002031,4.06e-21,120;CL:0002087,1.28e-18,115;CL:0000219,3.06e-09,386;CL:0000134,7.87e-09,354;CL:0002320,4.84e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-17;42!CL:0000049;6.47e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!8.34e-21!86;UBERON:0002371!1.73e-19!80;UBERON:0002390!1.31e-18!102;UBERON:0003061!1.31e-18!102;UBERON:0002193!1.02e-16!112;UBERON:0004765!6.77e-16!101;UBERON:0001434!6.77e-16!101;UBERON:0002405!1.87e-14!115;UBERON:0003081!2.55e-08!216;UBERON:0002384!3.39e-08!375;UBERON:0002204!4.46e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.37e-22,82;UBERON:0002371,2.78e-21,76;UBERON:0002390,4.88e-20,98;UBERON:0003061,4.88e-20,98;UBERON:0002405,2.06e-18,93;UBERON:0004765,3.41e-18,90;UBERON:0002193,6.08e-18,108;UBERON:0001434,2.15e-16,100;UBERON:0002384,5.93e-09,371;UBERON:0003081,7.16e-08,203;UBERON:0002204,3.99e-07,167 | |||
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| |||
|short_description=p1@TP53BP2 | |||
}} |
Revision as of 00:23, 11 January 2014
Short description: | p1@TP53BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TP53BP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000343537, ENST00000391878, ENST00000465119, NM_001031685, NM_005426, uc001hod.2, uc010pvb.1_5end |
EntrezGene: | TP53BP2 |
HGNC: | 12000 |
UniProt: | Q13625F8WBY9B4DG66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.24e-32 | 108 |
common myeloid progenitor | 4.24e-32 | 108 |
hematopoietic stem cell | 3.02e-30 | 168 |
myeloid leukocyte | 3.94e-30 | 72 |
hematopoietic cell | 1.61e-29 | 177 |
hematopoietic oligopotent progenitor cell | 7.09e-28 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-28 | 161 |
granulocyte monocyte progenitor cell | 3.18e-27 | 67 |
leukocyte | 3.98e-27 | 136 |
myeloid lineage restricted progenitor cell | 6.45e-26 | 66 |
macrophage dendritic cell progenitor | 1.06e-23 | 61 |
classical monocyte | 1.47e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-23 | 42 |
monopoietic cell | 9.82e-23 | 59 |
monocyte | 9.82e-23 | 59 |
monoblast | 9.82e-23 | 59 |
promonocyte | 9.82e-23 | 59 |
defensive cell | 1.33e-21 | 48 |
phagocyte | 1.33e-21 | 48 |
hematopoietic lineage restricted progenitor cell | 4.06e-21 | 120 |
nongranular leukocyte | 1.28e-18 | 115 |
motile cell | 3.06e-09 | 386 |
mesenchymal cell | 7.87e-09 | 354 |
connective tissue cell | 4.84e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.37e-22 | 82 |
bone marrow | 2.78e-21 | 76 |
hematopoietic system | 4.88e-20 | 98 |
blood island | 4.88e-20 | 98 |
immune system | 2.06e-18 | 93 |
skeletal element | 3.41e-18 | 90 |
hemolymphoid system | 6.08e-18 | 108 |
skeletal system | 2.15e-16 | 100 |
connective tissue | 5.93e-09 | 371 |
lateral plate mesoderm | 7.16e-08 | 203 |
musculoskeletal system | 3.99e-07 | 167 |