FFCP PHASE1:Hg19::chr1:212782094..212782109,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=467 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=785 | |||
|TSSclassifier=strong | |||
|UniProt=P18847 | |||
|association_with_transcript=82bp_to_ENST00000341491,ENST00000465155_5end | |||
|description=CAGE_peak_1_at_ATF3_5end | |||
|id=chr1:212782094..212782109,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.50e-24!42;CL:0000860!2.51e-23!45;CL:0002009!1.38e-19!65;CL:0000557!1.43e-19!71;CL:0002194!1.94e-18!63;CL:0000576!1.94e-18!63;CL:0000040!1.94e-18!63;CL:0000559!1.94e-18!63;CL:0000839!1.90e-17!70;CL:0000766!1.09e-16!76;CL:0000738!5.09e-11!140;CL:0000763!2.46e-10!112;CL:0000049!2.46e-10!112;CL:0002031!2.08e-09!124;CL:0002087!2.60e-09!119;CL:0000037!7.84e-07!172;CL:0000566!7.84e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.45e-19;33!CL:0002057;4.45e-19;33!CL:0000473;2.25e-17;39!CL:0000234;2.25e-17;39!CL:0000576;9.06e-11;48!CL:0000766;1.78e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.07e-25,48;CL:0000234,1.07e-25,48;CL:0000860,4.50e-24,42;CL:0002057,4.50e-24,42;CL:0002009,4.77e-20,61;CL:0000557,6.04e-20,67;CL:0002194,7.06e-19,59;CL:0000576,7.06e-19,59;CL:0000040,7.06e-19,59;CL:0000559,7.06e-19,59;CL:0000839,9.41e-18,66;CL:0000766,6.22e-17,72;CL:0000738,5.80e-11,136;CL:0000763,2.80e-10,108;CL:0000049,2.80e-10,108;CL:0002031,2.40e-09,120;CL:0002087,2.92e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-17;42 | |||
|ontology_enrichment_disease=DOID:0050687!3.60e-12!143;DOID:305!1.80e-11!106;DOID:162!2.85e-09!235;DOID:14566!3.75e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.55e-12,143;DOID:305,1.78e-11,106;DOID:162,2.89e-09,235;DOID:14566,3.80e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.73e-17!86;UBERON:0002371!2.96e-17!80;UBERON:0004765!7.64e-13!101;UBERON:0001434!7.64e-13!101;UBERON:0002405!9.36e-13!115;UBERON:0002390!1.37e-12!102;UBERON:0003061!1.37e-12!102;UBERON:0002193!1.29e-10!112;UBERON:0000062!1.95e-08!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.13e-17,82;UBERON:0002371,1.78e-17,76;UBERON:0004765,8.05e-16,90;UBERON:0002405,2.07e-13,93;UBERON:0002390,1.35e-12,98;UBERON:0003061,1.35e-12,98;UBERON:0001434,1.58e-12,100;UBERON:0002193,1.44e-10,108 | |||
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| |||
|short_description=p1@ATF3 | |||
}} |
Revision as of 00:07, 11 January 2014
Short description: | p1@ATF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 82bp_to_ENST00000341491, ENST00000465155_5end |
EntrezGene: | ATF3 |
HGNC: | 785 |
UniProt: | P18847 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.07e-25 | 48 |
phagocyte | 1.07e-25 | 48 |
classical monocyte | 4.50e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.50e-24 | 42 |
macrophage dendritic cell progenitor | 4.77e-20 | 61 |
granulocyte monocyte progenitor cell | 6.04e-20 | 67 |
monopoietic cell | 7.06e-19 | 59 |
monocyte | 7.06e-19 | 59 |
monoblast | 7.06e-19 | 59 |
promonocyte | 7.06e-19 | 59 |
myeloid lineage restricted progenitor cell | 9.41e-18 | 66 |
myeloid leukocyte | 6.22e-17 | 72 |
leukocyte | 5.80e-11 | 136 |
myeloid cell | 2.80e-10 | 108 |
common myeloid progenitor | 2.80e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 2.40e-09 | 120 |
nongranular leukocyte | 2.92e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.13e-17 | 82 |
bone marrow | 1.78e-17 | 76 |
skeletal element | 8.05e-16 | 90 |
immune system | 2.07e-13 | 93 |
hematopoietic system | 1.35e-12 | 98 |
blood island | 1.35e-12 | 98 |
skeletal system | 1.58e-12 | 100 |
hemolymphoid system | 1.44e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.55e-12 | 143 |
carcinoma | 1.78e-11 | 106 |
cancer | 2.89e-09 | 235 |
disease of cellular proliferation | 3.80e-08 | 239 |