FFCP PHASE1:Hg19::chr1:209945462..209945477,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3934 | |||
|description=CAGE_peak_at_chr1:209945462..209945477,- | |||
|id=chr1:209945462..209945477,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.82e-11;1!CL:1000600;2.82e-11;1!CL:0002251;2.82e-08;20!CL:0000540;2.11e-07;6!CL:0000404;2.11e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,8.12e-12,63;CL:1001319,2.68e-11,1;CL:1000600,2.68e-11,1;CL:0002251,2.72e-08,20;CL:0000540,2.18e-07,6;CL:0000031,2.18e-07,6;CL:0000404,2.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.11e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!6.36e-17!14;DOID:305!1.43e-11!106;DOID:0050687!1.78e-10!143;DOID:162!1.26e-07!235;DOID:14566!4.07e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.70e-57;14!DOID:4362;5.17e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.00e-57,14;DOID:305,4.22e-14,106;DOID:0050687,6.36e-10,143;DOID:4362,5.28e-09,5;DOID:162,1.92e-08,235;DOID:14566,3.25e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.30e-20!57;UBERON:0005068!1.30e-20!57;UBERON:0006241!1.30e-20!57;UBERON:0007135!1.30e-20!57;UBERON:0002780!1.41e-20!41;UBERON:0001890!1.41e-20!41;UBERON:0006240!1.41e-20!41;UBERON:0003080!7.52e-20!42;UBERON:0001893!1.11e-17!34;UBERON:0002616!5.80e-17!59;UBERON:0002791!8.84e-17!33;UBERON:0002020!5.66e-16!34;UBERON:0003528!5.66e-16!34;UBERON:0001869!7.77e-16!32;UBERON:0001017!1.02e-15!82;UBERON:0005743!3.85e-15!86;UBERON:0000955!4.40e-15!69;UBERON:0006238!4.40e-15!69;UBERON:0002346!5.66e-15!90;UBERON:0000924!7.96e-15!173;UBERON:0006601!7.96e-15!173;UBERON:0003056!4.10e-14!61;UBERON:0000073!6.02e-14!94;UBERON:0001016!6.02e-14!94;UBERON:0004121!1.51e-13!169;UBERON:0003075!1.71e-13!86;UBERON:0007284!1.71e-13!86;UBERON:0000033!8.11e-12!123;UBERON:0000153!3.62e-11!129;UBERON:0007811!3.62e-11!129;UBERON:0002420!5.63e-11!9;UBERON:0007245!5.63e-11!9;UBERON:0010009!5.63e-11!9;UBERON:0010011!5.63e-11!9;UBERON:0000454!5.63e-11!9;UBERON:0007023!1.28e-10!115;UBERON:0002619!2.56e-10!22;UBERON:0000956!7.79e-10!25;UBERON:0000203!7.79e-10!25;UBERON:0009663!1.10e-08!7;UBERON:0001950!1.64e-08!20;UBERON:0002308!3.34e-08!9;UBERON:0000125!3.34e-08!9;UBERON:0000344!1.10e-07!12;UBERON:0003729!1.72e-07!5;UBERON:0000349!5.32e-07!5;UBERON:0003343!6.76e-07!4;UBERON:0004785!6.76e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.37e-40;4!UBERON:0004785;2.37e-40;4!UBERON:0000974;4.89e-27;6!UBERON:0003729;1.24e-12;13!UBERON:0000344;1.87e-12;20!UBERON:0000997;9.57e-12;1!UBERON:0005056;9.57e-12;1!UBERON:0004176;9.57e-12;1!UBERON:0004645;2.82e-11;1!UBERON:0001256;2.82e-11;1!UBERON:0001259;2.82e-11;1!UBERON:0000161;1.06e-08;19!UBERON:0000166;1.06e-08;19!UBERON:0000002;1.19e-07;6!UBERON:0001560;1.19e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.94e-40,4;UBERON:0004785,1.94e-40,4;UBERON:0000974,2.21e-16,10;UBERON:0003729,1.17e-12,13;UBERON:0000344,1.76e-12,20;UBERON:0000997,9.57e-12,1;UBERON:0005056,9.57e-12,1;UBERON:0004645,2.68e-11,1;UBERON:0001256,2.68e-11,1;UBERON:0001259,2.68e-11,1;UBERON:0000002,1.21e-07,6;UBERON:0001560,1.21e-07,6;UBERON:0000166,1.50e-07,22;UBERON:0000161,7.18e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0,0,0,0,0,0,0,0.369754010166788,0.309868802321207,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.548751427043128,0,0.301586917234893,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0.0895585227028483,0.581267877027924,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,1.54657762555539,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.460404944679482,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0.929015875628594,0.144269212976445,0,0.318852545457645,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,2.98244294329889,0.422008249231538,0,0,0.211125408127993,0,0,0.251932747854276,0,0.123084805461069,0,0.629078458031288,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.331737779793674,0.591095237907095,0,0,2.50962739701486,0,0,0,0.718061155278177,0,0,0,0.533034776018635,0,0,0,0,0,0,0.37950746544837,0,0.210998064528027,0.326465616318295,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.337005664903385,0,0.234264445725339,0.182454789215666,6.26126780582687,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73559738335131,12.445034471626,5.74590763430657,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0.400794101257669,0,0.19980960958213,0,0,0.343189995723929,0.432164393964449,0,17.4413585616429,0,0.104602846312333,0,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,1.349843349309,0.77380195455795,0.121499113316049,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0.414239055347196,0,0,0,3.19170628885091,0,0,0,0,0,0.886068179966986,0.976210119215705,0.500763722825999,0,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0.691292180758654,0.194860308839388,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0.33946505990805,0.425149840203366,0,0,0,0.394308725006267,0,0,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0,0,3.82776102154,1.88751557356385,4.03542916747694,10.1662586212298,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0.295712172434091,0.405225507710368,0.781078098613847,0,0.317079050969534,0,0,0,0.175871244359621,0.894336993477167,0.535701835878287,0.336283722218824,0,0.91064876540519,0,0,0.171488009437418,0.271878931907327,0,0.118193840883968,0.222462803784138,0.156986185701028,0.471346769748006,2.24217730651031,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.219881033490858,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,3.92818664932447,0.352894871715692,0.0802413666891683,0,0,0.573358332605805,0.157771562193185,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.459474497674225,0,0,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0.134704106029175,0,0,2.84911440138411,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:209945462..209945477,- | |||
}} |
Revision as of 00:01, 11 January 2014
Short description: | p@chr1:209945462..209945477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209945462..209945477, - |
Coexpression cluster: | C3934_glassy_epidermoid_oral_ductal_malignant_squamous_acantholytic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 8.12e-12 | 63 |
bladder cell | 2.68e-11 | 1 |
lower urinary tract cell | 2.68e-11 | 1 |
epithelial cell of alimentary canal | 2.72e-08 | 20 |
neuron | 2.18e-07 | 6 |
neuroblast | 2.18e-07 | 6 |
electrically signaling cell | 2.18e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.94e-40 | 4 |
respiratory system mucosa | 1.94e-40 | 4 |
neck | 2.21e-16 | 10 |
mouth mucosa | 1.17e-12 | 13 |
mucosa | 1.76e-12 | 20 |
mammalian vulva | 9.57e-12 | 1 |
external female genitalia | 9.57e-12 | 1 |
urinary bladder urothelium | 2.68e-11 | 1 |
wall of urinary bladder | 2.68e-11 | 1 |
mucosa of urinary bladder | 2.68e-11 | 1 |
uterine cervix | 1.21e-07 | 6 |
neck of organ | 1.21e-07 | 6 |
oral opening | 1.50e-07 | 22 |
orifice | 7.18e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.00e-57 | 14 |
carcinoma | 4.22e-14 | 106 |
cell type cancer | 6.36e-10 | 143 |
cervical cancer | 5.28e-09 | 5 |
cancer | 1.92e-08 | 235 |
disease of cellular proliferation | 3.25e-08 | 239 |