FFCP PHASE1:Hg19::chr1:206290313..206290320,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C224 | |||
|description=CAGE_peak_at_chr1:206290313..206290320,- | |||
|id=chr1:206290313..206290320,- | |||
|ontology_enrichment_celltype=CL:0000542!5.23e-23!53;CL:0000051!5.23e-23!53;CL:0000945!4.79e-20!24;CL:0000826!4.79e-20!24;CL:0000838!6.43e-20!52;CL:0000738!1.41e-11!140;CL:0000313!2.16e-09!1;CL:0000946!3.83e-09!1;CL:0000786!3.83e-09!1;CL:0000980!3.83e-09!1;CL:0000037!6.70e-09!172;CL:0000566!6.70e-09!172;CL:0002087!6.81e-09!119;CL:0002031!1.85e-08!124;CL:0000988!2.96e-08!182;CL:0002032!4.52e-08!165;CL:0000837!4.52e-08!165;CL:0000453!2.43e-07!5;CL:0000451!3.58e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002149;6.78e-08;6!CL:0002255;6.78e-08;6!CL:0000084;2.50e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6;CL:0000084,2.50e-07,25;CL:0000827,2.50e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.38e-07;7 | |||
|ontology_enrichment_disease=DOID:630!1.69e-09!1;DOID:0050177!1.69e-09!1;DOID:0050427!1.69e-09!1;DOID:2152!2.16e-09!1;DOID:12603!2.77e-09!1;DOID:0060058!8.54e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.11e-21;2!DOID:3001;6.78e-08;6!DOID:299;2.28e-07;25!DOID:120;6.82e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.11e-21,2;DOID:3001,6.78e-08,6;DOID:299,2.28e-07,25;DOID:120,6.82e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0004911!2.16e-09!1;UBERON:0002372!5.28e-09!1;UBERON:0001961!5.28e-09!1;UBERON:0001744!5.28e-09!1;UBERON:0001735!5.28e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.40e-14;3!UBERON:0004177;2.74e-09;5!UBERON:0005057;2.74e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.40e-14,3;UBERON:0004854,1.40e-14,3;UBERON:0009034,1.40e-14,3;UBERON:0002095,1.40e-14,3;UBERON:0004782,1.40e-14,3;UBERON:0003281,1.40e-14,3;UBERON:0009664,1.40e-14,3;UBERON:0002296,1.40e-14,3;UBERON:0005602,1.40e-14,3;UBERON:0001179,1.40e-14,3;UBERON:0006293,1.40e-14,3;UBERON:0004177,5.38e-07,7;UBERON:0005057,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,7.01901075084335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,1.21491816834592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89829352182294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr1:206290313..206290320,- | |||
}} |
Revision as of 23:46, 10 January 2014
Short description: | p@chr1:206290313..206290320, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:206290313..206290320, - |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 6.78e-08 | 6 |
stromal cell of endometrium | 6.78e-08 | 6 |
T cell | 2.50e-07 | 25 |
pro-T cell | 2.50e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.40e-14 | 3 |
gastrointestinal system mesentery | 1.40e-14 | 3 |
stomach region | 1.40e-14 | 3 |
mesentery | 1.40e-14 | 3 |
gastrointestinal system serosa | 1.40e-14 | 3 |
mesentery of stomach | 1.40e-14 | 3 |
gut mesentery | 1.40e-14 | 3 |
dorsal mesentery | 1.40e-14 | 3 |
dorsal mesogastrium | 1.40e-14 | 3 |
peritoneal cavity | 1.40e-14 | 3 |
spleen primordium | 1.40e-14 | 3 |
hemopoietic organ | 5.38e-07 | 7 |
immune organ | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.11e-21 | 2 |
female reproductive endometrioid cancer | 6.78e-08 | 6 |
adenocarcinoma | 2.28e-07 | 25 |
female reproductive organ cancer | 6.82e-07 | 27 |