FFCP PHASE1:Hg19::chr1:198567966..198567999,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000429469_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000429469_5end | |||
|id=chr1:198567966..198567999,- | |||
|ontology_enrichment_celltype=CL:0000945!3.20e-42!24;CL:0000826!3.20e-42!24;CL:0000236!7.05e-31!14;CL:0000542!8.77e-30!53;CL:0000051!8.77e-30!53;CL:0000838!3.87e-28!52;CL:0000037!2.44e-17!172;CL:0000566!2.44e-17!172;CL:0002032!7.68e-16!165;CL:0000837!7.68e-16!165;CL:0000988!1.20e-15!182;CL:0002087!2.62e-14!119;CL:0000738!3.87e-13!140;CL:0002031!7.81e-10!124;CL:0000817!1.82e-07!3;CL:0000239!2.25e-07!3;CL:1000615!2.25e-07!3;CL:0002306!2.25e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.98e-76;24!CL:0000236;9.41e-68;13!CL:0000542;2.69e-25;53!CL:0000239;2.11e-15;3!CL:1000615;2.11e-15;3!CL:0002306;2.11e-15;3!CL:0000817;9.93e-07;1!CL:0000785;9.93e-07;1!CL:0000819;9.93e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.75e-76,24;CL:0000826,5.75e-76,24;CL:0000236,1.05e-62,14;CL:0000542,9.31e-36,53;CL:0000051,9.31e-36,53;CL:0000838,9.98e-33,52;CL:0002032,1.64e-16,161;CL:0000837,1.64e-16,161;CL:0000037,1.37e-15,168;CL:0000239,2.34e-15,3;CL:1000615,2.34e-15,3;CL:0002306,2.34e-15,3;CL:0000988,1.63e-14,177;CL:0002087,7.17e-14,115;CL:0002031,1.28e-11,120;CL:0000738,4.59e-11,136;CL:0000817,3.81e-08,3;CL:0000819,9.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.69e-25;53 | |||
|ontology_enrichment_disease=DOID:2531!2.01e-09!51;DOID:0060083!2.01e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.09e-12;10!DOID:2531;7.80e-08;51!DOID:0060083;7.80e-08;51!DOID:12603;9.15e-07;1!DOID:0060073;9.93e-07;1!DOID:8675;9.93e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.26e-14,51;DOID:0060083,1.26e-14,51;DOID:0060058,1.01e-12,10;DOID:1240,1.69e-07,39;DOID:12603,9.15e-07,1;DOID:0060073,9.67e-07,1;DOID:8675,9.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.68e-12!15;UBERON:0000179!9.68e-12!15;UBERON:0000463!9.68e-12!15;UBERON:0004177!1.96e-09!7;UBERON:0006853!2.25e-07!3;UBERON:0007685!2.25e-07!3;UBERON:0004134!2.25e-07!3;UBERON:0002106!8.22e-07!3;UBERON:0004854!8.22e-07!3;UBERON:0009034!8.22e-07!3;UBERON:0002095!8.22e-07!3;UBERON:0004782!8.22e-07!3;UBERON:0003281!8.22e-07!3;UBERON:0009664!8.22e-07!3;UBERON:0002296!8.22e-07!3;UBERON:0005602!8.22e-07!3;UBERON:0001179!8.22e-07!3;UBERON:0006293!8.22e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.11e-15;3!UBERON:0007685;2.11e-15;3!UBERON:0004134;2.11e-15;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.34e-15,3;UBERON:0007685,2.34e-15,3;UBERON:0004134,2.34e-15,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,6.23964479819588,5.03749000407547,0,0,0.154816123316076,0,0,0,5.34523684004081,4.83375390457233,0,0,0.200544447470142,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,40.4791362261042,33.8605938982522,62.2656477704488,17.0692089026603,44.0435585739614,41.9569281166773,34.3743333848128,54.3810640085158,6.26134266020393,4.11066032559657,2.6759125968766,0,0.560508562981536,0.790152254325231,0,0,0,0.83593247695339,0.651844533267181,0,1.94826728407911,0,0.294605907474837,0.221533894583621,0.812411591295047,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.95569624297229,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,2.29388645740534,1.66215201785745,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,1.52927441428475,0,0.238231775457789,1.23408681925858,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,13.9352381344289,11.5415370381156,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,8.63059139075251,0,5.13865789104368,0,21.1480507631774,0,0,0,0,0,0,0,0,0,0,3.67318726575589,0,0,0,3.31540698637377,0,0,0.615424027305347,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81467895790641,0.451191321234361,0.19606253431774,0.335643173951685,0,9.53619473882272,0,2.61172493054636,0,0,0,0,0.611030144933625,0,0,0,0,0,0,11.6771065098026,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,2.9553307469762,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,2.9230223611415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939839179798536,0.193373663920732,1.39917618294901,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.435433495793923,0,0.80822463617505,0,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.961705476909699 | |||
|short_description=p1@ENST00000429469 | |||
}} |
Revision as of 23:08, 10 January 2014
Short description: | p1@ENST00000429469 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000429469_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000429469_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.75e-76 | 24 |
pro-B cell | 5.75e-76 | 24 |
B cell | 1.05e-62 | 14 |
lymphocyte | 9.31e-36 | 53 |
common lymphoid progenitor | 9.31e-36 | 53 |
lymphoid lineage restricted progenitor cell | 9.98e-33 | 52 |
hematopoietic oligopotent progenitor cell | 1.64e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-16 | 161 |
hematopoietic stem cell | 1.37e-15 | 168 |
brush border epithelial cell | 2.34e-15 | 3 |
kidney cortex tubule cell | 2.34e-15 | 3 |
epithelial cell of proximal tubule | 2.34e-15 | 3 |
hematopoietic cell | 1.63e-14 | 177 |
nongranular leukocyte | 7.17e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.28e-11 | 120 |
leukocyte | 4.59e-11 | 136 |
precursor B cell | 3.81e-08 | 3 |
B-1 B cell | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.34e-15 | 3 |
region of nephron tubule | 2.34e-15 | 3 |
proximal tubule | 2.34e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.26e-14 | 51 |
immune system cancer | 1.26e-14 | 51 |
lymphoma | 1.01e-12 | 10 |
leukemia | 1.69e-07 | 39 |
acute leukemia | 9.15e-07 | 1 |
lymphatic system cancer | 9.67e-07 | 1 |
lymphosarcoma | 9.67e-07 | 1 |