FFCP PHASE1:Hg19::chr1:171454659..171454723,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23215 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24903 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPN9,Q9Y520 | |||
|association_with_transcript=0bp_to_ENST00000338920,ENST00000367742,ENST00000476522,NM_015172,uc001ghq.1,uc001ghr.1,uc010pmg.1_5end | |||
|coexpression_cluster_id=C3904 | |||
|description=CAGE_peak_1_at_PRRC2C_5end | |||
|id=chr1:171454659..171454723,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.84e-30!172;CL:0000566!3.84e-30!172;CL:0000738!3.44e-28!140;CL:0002032!3.51e-28!165;CL:0000837!3.51e-28!165;CL:0000988!6.53e-27!182;CL:0002087!9.86e-21!119;CL:0002031!4.98e-20!124;CL:0000763!6.36e-19!112;CL:0000049!6.36e-19!112;CL:0000766!8.85e-16!76;CL:0002057!5.34e-15!42;CL:0000860!9.03e-15!45;CL:0000557!1.45e-13!71;CL:0002009!7.62e-12!65;CL:0000839!2.11e-11!70;CL:0002194!4.06e-11!63;CL:0000576!4.06e-11!63;CL:0000040!4.06e-11!63;CL:0000559!4.06e-11!63;CL:0000542!9.44e-09!53;CL:0000051!9.44e-09!53;CL:0000838!2.30e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-16;33!CL:0002057;1.65e-16;33!CL:0000473;4.44e-11;39!CL:0000234;4.44e-11;39!CL:0000576;5.11e-10;48!CL:0002087;8.13e-09;104!CL:0000766;1.09e-07;69!CL:0000763;6.61e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.84e-30,168;CL:0000738,2.04e-28,136;CL:0002032,2.60e-28,161;CL:0000837,2.60e-28,161;CL:0000988,1.61e-27,177;CL:0002087,6.38e-21,115;CL:0002031,3.48e-20,120;CL:0000763,4.17e-19,108;CL:0000049,4.17e-19,108;CL:0000766,4.35e-16,72;CL:0000860,5.34e-15,42;CL:0002057,5.34e-15,42;CL:0000557,7.85e-14,67;CL:0000473,3.50e-12,48;CL:0000234,3.50e-12,48;CL:0002009,4.33e-12,61;CL:0000839,1.35e-11,66;CL:0002194,2.39e-11,59;CL:0000576,2.39e-11,59;CL:0000040,2.39e-11,59;CL:0000559,2.39e-11,59;CL:0000542,9.44e-09,53;CL:0000051,9.44e-09,53;CL:0000838,2.30e-08,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-11;42 | |||
|ontology_enrichment_disease=DOID:162!4.15e-10!235;DOID:14566!2.31e-09!239;DOID:0050687!2.61e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.15e-10,235;DOID:14566,2.31e-09,239;DOID:0050687,2.61e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.17e-14!102;UBERON:0003061!4.17e-14!102;UBERON:0002193!7.32e-12!112;UBERON:0001474!1.81e-10!86;UBERON:0002371!3.23e-10!80;UBERON:0004765!9.98e-08!101;UBERON:0001434!9.98e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.17e-14,98;UBERON:0003061,3.17e-14,98;UBERON:0002193,6.59e-12,108;UBERON:0001474,1.48e-10,82;UBERON:0002371,2.54e-10,76;UBERON:0002405,3.10e-09,93;UBERON:0004765,4.80e-08,90;UBERON:0001434,7.50e-07,100 | |||
|phase1_expression=48.3264488859681,50.955924686054,70.0543388356977,43.0315182918461,48.2717981981471,48.8509573496206,20.2639902534648,27.7956744307806,35.521245435178,21.3788524756313,47.4504794221251,50.8968397063301,36.9273769519835,44.6796534185768,67.9364620242227,70.5941403774364,57.8586746903018,48.930776055954,59.0398686536513,39.2756175264953,41.6161410138276,31.6589268692869,68.4104009243226,91.1583670985409,81.2260878178374,168.262319456989,170.522924287537,181.349640146717,132.170397021232,251.792085151772,122.924001912964,53.3264310197778,59.6387719180935,58.4211336063525,105.122991187469,127.099293843755,80.4465203777481,190.574420534966,264.317581765647,183.808207496327,90.0140206444496,109.152165448396,122.348394626239,161.682841522876,181.758328914317,191.156240215999,198.72682655436,230.254017292222,258.295113326516,247.415457397049,289.717759084413,239.320016647248,287.173152053603,390.518233568215,331.794892156137,179.95967660273,217.233295446045,180.228234524958,301.492633985339,378.375322922714,345.242047931482,262.561634948626,234.768725020661,241.243208801505,351.733597217844,479.440514864013,535.004311887199,273.86104512985,248.747352086436,231.523308455654,257.294788619182,478.024371511859,411.717566060591,80.0657535122259,82.4904683864369,58.4947620968369,93.5697497450304,84.249236884085,190.299094649343,71.2531859353121,67.6316702476906,69.7777067380902,77.438347562982,99.9433658609701,100.514545686582,82.7856631779024,90.0890970831028,99.4321721121256,80.6474744797532,112.578343035173,339.820142558341,423.985250725818,386.860506862732,146.710174722719,275.770212986916,58.9980349896173,385.157729882885,334.845169862288,310.252661990259,130.405466404729,172.412879049169,150.08295441791,198.72326297607,126.116637194016,132.572658363677,118.963701391405,202.290486232467,123.608123535277,129.018872779399,117.408663887025,105.289356776408,160.550909497219,195.293403684434,185.673334694261,183.982521896759,119.994593916723,141.791582632711,114.427939345716,229.23584096967,103.215194241007,97.6625180784628,103.599272844873,148.617642529762,189.036224675076,112.437653897111,120.993175794493,87.860695670552,294.749058594559,291.777253599806,294.42801309373,75.5801285573281,50.9732653374763,31.8377778990391,69.7577564102213,45.1204119572301,40.5570253090306,113.725890428307,40.8773291054214,102.381206988685,80.4877712789107,89.1523074785229,60.184885191199,21.49342200926,41.5278575918561,93.4696493725488,105.522620803356,70.7336349960363,127.830974627663,147.002692070493,157.126523062406,44.9203040648754,62.7971254427471,36.796893170405,59.357333902021,60.8274182504364,102.619029643645,77.3281376186199,93.8052835784664,111.710606483627,127.528553463339,41.088590345133,52.4587752945774,39.5380533228035,111.034250264452,74.5330592051219,126.448415250257,111.142039449954,115.426767495405,44.4618248651061,42.7169546805658,60.0901720091736,271.46765991829,317.979816601627,22.6768907114118,88.4610074017667,67.2408016938919,122.610901433041,183.288600658492,66.6776558532911,52.7036944133769,52.3070079075554,51.0601825223521,96.1642099385278,87.6966475173669,95.2982895151464,61.6024730514871,118.69224044288,41.2405720027482,47.4483316782087,46.7786893666448,42.8917713183669,95.0045094028058,106.026778561126,107.023514707113,88.3987561533688,82.9131641854434,84.8304663453034,68.9041657223591,53.4096567241683,40.0470999252732,15.8095991199572,73.5628817979269,105.09955669245,123.293531390461,66.7245983738874,47.8120961446471,51.0809400282429,30.2863929037256,229.259954410366,60.0096262580174,58.4932047200391,144.043726120513,89.6557004374418,120.060491661263,56.5795243248033,171.98308255385,72.590568845093,157.013807579839,68.6692243871553,111.53577920498,152.299115189628,72.1385023309904,53.4115865778036,75.9515152931757,96.8248728097463,116.729470323325,108.190677336951,126.830988283661,103.993578868219,105.423292950632,117.581516508043,206.212207877844,65.7088035785227,75.9024307067605,29.0083334840209,62.2253023562852,38.259612528488,77.6092608261376,79.0662196466297,98.0914891625772,74.8896074852955,75.1684082118801,90.87464711955,69.5729550106448,73.9754923522555,82.3358915865275,56.8379700060979,35.0604434508615,26.3407367252096,35.2820907325301,59.5748663662605,62.9009418673681,88.6184860022106,103.743828362443,102.080403990784,65.1957679134397,140.809616179267,37.0925785750145,77.1057218397209,89.9033802489322,28.9969391726189,19.758760920312,53.4025965493511,52.4005430487347,83.0079468247259,64.8205350447221,37.9648120312821,64.876665911998,30.0277671224525,35.1979326458898,96.024632374085,75.3493733748345,84.4225001799976,39.3682102744463,104.316901611492,85.490383637159,99.2308431547559,77.0179937061999,36.8047371998603,566.562723580335,82.589431104406,161.301273890721,193.264857532145,156.91934474899,63.3074006092925,36.2889004280364,21.0991404978085,17.1072446022705,54.0872611619482,59.4679254530957,96.895160661766,65.3724221733453,57.1107690171597,81.8455269761802,87.3876798522578,2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| |||
|short_description=p1@PRRC2C | |||
}} |
Revision as of 22:14, 10 January 2014
Short description: | p1@PRRC2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRRC2C_5end |
Coexpression cluster: | C3904_CD14_Mast_CD19_Neutrophils_CD4_Eosinophils_CD8 |
Association with transcript: | 0bp_to_ENST00000338920, ENST00000367742, ENST00000476522, NM_015172, uc001ghq.1, uc001ghr.1, uc010pmg.1_5end |
EntrezGene: | PRRC2C |
HGNC: | 24903 |
UniProt: | E7EPN9Q9Y520 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.84e-30 | 168 |
leukocyte | 2.04e-28 | 136 |
hematopoietic oligopotent progenitor cell | 2.60e-28 | 161 |
hematopoietic multipotent progenitor cell | 2.60e-28 | 161 |
hematopoietic cell | 1.61e-27 | 177 |
nongranular leukocyte | 6.38e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 3.48e-20 | 120 |
myeloid cell | 4.17e-19 | 108 |
common myeloid progenitor | 4.17e-19 | 108 |
myeloid leukocyte | 4.35e-16 | 72 |
classical monocyte | 5.34e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.34e-15 | 42 |
granulocyte monocyte progenitor cell | 7.85e-14 | 67 |
defensive cell | 3.50e-12 | 48 |
phagocyte | 3.50e-12 | 48 |
macrophage dendritic cell progenitor | 4.33e-12 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-11 | 66 |
monopoietic cell | 2.39e-11 | 59 |
monocyte | 2.39e-11 | 59 |
monoblast | 2.39e-11 | 59 |
promonocyte | 2.39e-11 | 59 |
lymphocyte | 9.44e-09 | 53 |
common lymphoid progenitor | 9.44e-09 | 53 |
lymphoid lineage restricted progenitor cell | 2.30e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-14 | 98 |
blood island | 3.17e-14 | 98 |
hemolymphoid system | 6.59e-12 | 108 |
bone element | 1.48e-10 | 82 |
bone marrow | 2.54e-10 | 76 |
immune system | 3.10e-09 | 93 |
skeletal element | 4.80e-08 | 90 |
skeletal system | 7.50e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.15e-10 | 235 |
disease of cellular proliferation | 2.31e-09 | 239 |
cell type cancer | 2.61e-07 | 143 |