FFCP PHASE1:Hg19::chr1:162602244..162602289,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4921 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2731 | |||
|TSSclassifier=strong | |||
|UniProt=Q16832,Q5T244 | |||
|association_with_transcript=0bp_to_ENST00000367921,ENST00000367922,ENST00000542391_5end | |||
|coexpression_cluster_id=C811 | |||
|description=CAGE_peak_1_at_DDR2_5end | |||
|id=chr1:162602244..162602289,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.66e-44!180;CL:0000057!3.48e-25!75;CL:0000680!5.75e-14!57;CL:0000056!5.75e-14!57;CL:0000355!5.75e-14!57;CL:0000187!5.32e-13!54;CL:0002620!4.61e-12!23;CL:0000183!5.77e-12!59;CL:0000222!7.80e-11!119;CL:0000393!1.19e-10!60;CL:0000211!1.19e-10!60;CL:0000192!2.99e-10!42;CL:0000514!2.99e-10!42;CL:0000359!6.13e-08!32;CL:0000136!6.40e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.90e-12;23!CL:0000057;1.05e-10;73!CL:0002320;2.37e-08;188!CL:0000192;3.81e-08;43!CL:0000187;8.23e-08;55!CL:0000359;9.69e-08;32!CL:0000134;1.33e-07;55!CL:0000048;5.99e-07;58!CL:0000723;7.01e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.36e-26,76;CL:0000680,7.12e-15,58;CL:0000056,7.12e-15,58;CL:0000355,7.12e-15,58;CL:0000187,7.21e-14,55;CL:0002620,1.94e-12,23;CL:0000192,5.19e-11,43;CL:0000514,5.19e-11,43;CL:0000393,5.60e-11,61;CL:0000211,5.60e-11,61;CL:0000222,2.28e-10,121;CL:0000359,3.62e-08,32;CL:0000136,4.11e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;3.81e-08;43!CL:0000355;5.84e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.18e-18!83;UBERON:0002329!1.18e-18!83;UBERON:0003077!1.18e-18!83;UBERON:0003059!1.18e-18!83;UBERON:0007282!1.18e-18!83;UBERON:0009618!1.18e-18!83;UBERON:0007285!1.18e-18!83;UBERON:0004290!6.40e-16!70;UBERON:0002385!4.22e-14!63;UBERON:0001015!4.22e-14!63;UBERON:0000383!4.22e-14!63;UBERON:0001134!8.62e-14!61;UBERON:0002036!8.62e-14!61;UBERON:0003082!8.62e-14!61;UBERON:0000486!1.81e-12!82;UBERON:0000475!6.27e-12!365;UBERON:0004872!1.12e-10!84;UBERON:0002199!2.57e-10!45;UBERON:0002416!2.57e-10!45;UBERON:0003102!1.35e-09!95;UBERON:0005256!1.58e-09!143;UBERON:0002097!3.69e-09!40;UBERON:0002049!1.27e-08!79;UBERON:0007798!1.27e-08!79;UBERON:0001981!3.94e-08!60;UBERON:0007500!3.94e-08!60;UBERON:0004537!3.94e-08!60;UBERON:0006965!3.94e-08!60;UBERON:0000468!4.93e-08!659;UBERON:0001637!7.58e-08!42;UBERON:0003509!7.58e-08!42;UBERON:0004572!7.58e-08!42;UBERON:0004573!1.21e-07!33;UBERON:0004571!1.21e-07!33;UBERON:0000055!3.30e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.44e-09;198!UBERON:0002385;3.34e-08;31!UBERON:0001015;3.34e-08;31!UBERON:0000383;3.34e-08;31!UBERON:0002097;1.17e-07;41!UBERON:0004573;2.21e-07;33!UBERON:0004571;2.21e-07;33!UBERON:0002199;2.55e-07;46!UBERON:0002416;2.55e-07;46!UBERON:0002204;9.03e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.61e-17,73;UBERON:0002329,6.73e-17,71;UBERON:0003059,6.73e-17,71;UBERON:0007282,6.73e-17,71;UBERON:0004290,6.73e-17,71;UBERON:0009618,6.73e-17,71;UBERON:0003077,9.43e-17,72;UBERON:0007285,9.43e-17,72;UBERON:0002385,5.25e-15,64;UBERON:0001015,5.25e-15,64;UBERON:0000383,5.25e-15,64;UBERON:0001134,1.10e-14,62;UBERON:0002036,1.10e-14,62;UBERON:0003082,1.10e-14,62;UBERON:0007503,2.20e-13,78;UBERON:0000486,3.56e-13,83;UBERON:0002199,4.15e-11,46;UBERON:0002416,4.15e-11,46;UBERON:0002097,6.63e-10,41;UBERON:0004872,7.60e-10,83;UBERON:0005256,1.34e-09,122;UBERON:0003102,7.89e-09,99;UBERON:0003104,1.31e-08,160;UBERON:0009142,1.31e-08,160;UBERON:0001637,4.51e-08,42;UBERON:0003509,4.51e-08,42;UBERON:0004572,4.51e-08,42;UBERON:0002049,5.87e-08,78;UBERON:0007798,5.87e-08,78;UBERON:0004573,7.34e-08,33;UBERON:0004571,7.34e-08,33;UBERON:0007500,1.42e-07,59;UBERON:0001981,1.42e-07,59;UBERON:0004537,1.42e-07,59;UBERON:0006965,1.42e-07,59;UBERON:0000490,2.10e-07,148 | |||
|phase1_expression=61.4072921934481,49.2431204949261,79.3573295060318,39.0285863577209,46.4839538204379,47.9786188255203,22.796989035148,75.8063848112197,38.1331017171764,2.94880723801811,0.697801167972428,0,0,108.171792487081,78.872575423244,59.1646128877562,54.2425075221579,48.930776055954,46.8415486838887,13.2970742722931,13.2600449308764,17.866919124251,8.01460763966959,6.98059567871709,8.41135685285179,0,0,0,0,0,3.2511385896376,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,26.8187552945358,22.8038292299236,48.459910938698,73.372147934067,75.7020245060193,61.5597705583501,41.3548692466572,29.1980922181582,17.1108019066963,10.1995522832779,3.42555664203192,14.2112296915018,0,0,0,0,0,0,0,0,11.1306948125355,11.1830497363796,5.9013885273291,12.4367747223282,10.9069853414576,4.95212475492121,4.80688423034664,0.516833518338658,2.84613010149368,2.00832367658802,0.805658634218294,4.56163263431108,1.70843440283719,8.08858776760911,1.62028389576352,23.1286296255767,11.900056749187,12.9503202555821,6.13266549863533,12.3404535743857,8.24407847686833,0,0,0,91.9398110636339,98.7717990983722,172.529162599624,314.3729363407,60.2936249737207,40.9294648103884,35.2271685908026,44.8934938119231,62.553418115353,46.8793138802514,28.2789092386284,41.4719351747112,39.1799628646399,70.0621081183052,44.6388909867358,31.9464220064892,54.100422359752,71.400175175409,56.3317846401098,39.1857750699273,103.302010654976,57.2407918672839,131.740370999101,77.2201857233335,59.0967960975751,36.4064544775211,33.7750526653632,53.6992203513471,63.1848525353419,100.574273920758,64.968687890364,83.3646804573333,51.8321303227759,21.8924113498841,173.828556982507,87.3449720267941,96.0051512252815,159.048280924733,110.472311343606,142.990499725324,106.458841821669,190.379702768148,86.6214975883056,126.469320896301,114.233924215093,129.640137568687,207.325602029703,96.5205101020794,66.8068733703321,0.193260853163297,0.272746120590835,0,0.365921118388786,0.132529768321485,0.580969714347592,0.518305275076852,0.252320850875628,0.72995471815166,31.2899064659632,45.6701066116949,38.6777779786946,47.3655286592619,99.6193684704028,0,0,0,0,0,0,0,0,0,0.738155454624648,9.81692416624121,14.405090396599,16.1709582524096,0,0.982827216677626,7.08947888017685,0,0.122988438543114,16.8136454092555,2.08525542276389,2.24803506515239,0.100528972411631,0.833296006426766,54.7357952921346,17.6788913497528,7.21656710126366,3.82570336417754,25.7125040376449,3.75352764178792,3.24089858803628,10.0834700684337,0,0,0,0,0,1.87467667973554,0.671928512795438,0.567100388969546,12.8964272692102,10.7534557250166,4.60059214998253,0,0,1.24396869324463,0.288239906833923,0.50496973370552,6.79427468926209,28.6491319168708,10.5495702489042,23.9501424431787,17.2750187741584,31.2356780157674,33.7275190504082,31.0603103636649,32.2610450936627,41.5094697746577,122.420314822616,32.1890801266694,43.955743132912,111.694008965646,82.1658751599792,11.8315392160585,7.09245660116391,17.3174416360465,75.0634466705275,20.0769993994834,14.8183260620538,30.9449375079048,61.4828071324604,18.2148930774689,65.7137841989898,33.9898048854115,37.5898446844534,0,0,0,116.218054913418,95.3354067423145,38.511964360994,82.5253448005201,69.4509970220296,30.0822418243025,0,0,0,0,10.9260688415659,7.8083912314573,0.773288812777695,2.17771144934653,4.46557126157214,0,0,0,107.600438237686,60.0204625271612,80.8369770625212,107.104993688366,126.863011034782,101.244950451786,129.441263566948,107.437757602796,81.8667014601546,87.9521105986292,62.437206262331,37.9800487195908,137.102343630635,12.7270752350781,12.6963066810017,0,0,0,0.303127571446259,3.32870879020994,3.62868351995616,101.724201205699,114.789556019471,42.9409944482603,97.257614285077,65.498527880538,61.2853439557145,32.651974617898,54.8986509937454,46.3436103067262,70.547227015862,62.8297859312182,41.7195258671254,0.120859449591622,0,2.11786274552562,64.6405343166736,78.6633845789018,69.3648155135354,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,2.16757150035082,1.50506932156456,0,0,0,0,0,16.1563578823325,6.88830755969382,91.4313289006692,12.0557983627835,34.4301187716971,41.1722404603734,5.74265537996172,1.30012049207304,109.265072294028,79.26998899954,32.3502095940753,37.915407657354,42.3158277527509,102.04923262486,53.946210136093,36.7326764163395,56.7134067069717,0,0,0,0.10115778085555,19.9883586197833,360.145324774252,59.248167963651,53.5978429506394,19.1630170914128,71.334505350156,45.9604063377722,35.4949719120138,51.3578549716341,46.8241548583714,29.7383102521167,11.2595028176987,78.7407737982414,48.3668936847424,28.2581510471723,50.3642881233281,50.5148134714341,40.9987160162989,25.0706277150912,19.021238540761,28.2243165680117,8.28977356452303,53.6169677188826,49.6555689756751,77.2589498569199,68.581634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| |||
|short_description=p1@DDR2 | |||
}} |
Revision as of 21:58, 10 January 2014
Short description: | p1@DDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDR2_5end |
Coexpression cluster: | C811_Smooth_Fibroblast_Preadipocyte_Chondrocyte_hepatic_basal_Adipocyte |
Association with transcript: | 0bp_to_ENST00000367921, ENST00000367922, ENST00000542391_5end |
EntrezGene: | DDR2 |
HGNC: | 2731 |
UniProt: | Q16832Q5T244 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.36e-26 | 76 |
muscle precursor cell | 7.12e-15 | 58 |
myoblast | 7.12e-15 | 58 |
multi-potent skeletal muscle stem cell | 7.12e-15 | 58 |
muscle cell | 7.21e-14 | 55 |
skin fibroblast | 1.94e-12 | 23 |
smooth muscle cell | 5.19e-11 | 43 |
smooth muscle myoblast | 5.19e-11 | 43 |
electrically responsive cell | 5.60e-11 | 61 |
electrically active cell | 5.60e-11 | 61 |
mesodermal cell | 2.28e-10 | 121 |
vascular associated smooth muscle cell | 3.62e-08 | 32 |
fat cell | 4.11e-07 | 15 |