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FFCP PHASE1:Hg19::chr1:111418209..111418214,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3847|description=CAGE_peak_at_chr1:111418209..111418214,+|id=chr1:111418209..111418214,+|ontology_enrichment_celltype=CL:0000084!2.09e-19!25;CL:0000827!2.09e-19!25;CL:0000791!9.22e-19!18;CL:0000789!9.22e-19!18;CL:0002420!9.22e-19!18;CL:0002419!9.22e-19!18;CL:0000790!9.22e-19!18;CL:0002087!4.19e-14!119;CL:0000988!1.57e-13!182;CL:0000037!1.85e-13!172;CL:0000566!1.85e-13!172;CL:0000738!2.12e-12!140;CL:0002031!5.45e-12!124;CL:0002032!6.62e-12!165;CL:0000837!6.62e-12!165;CL:0000838!1.21e-11!52;CL:0000542!2.26e-11!53;CL:0000051!2.26e-11!53;CL:0000815!1.68e-10!2;CL:0000792!1.68e-10!2;CL:0002677!1.68e-10!2;CL:0000625!6.96e-10!11;CL:0000624!2.10e-07!6;CL:0000898!2.92e-07!3;CL:0000080!6.64e-07!6|ontology_enrichment_celltype_v019=CL:0002127;4.27e-34;1!CL:0000911;4.27e-34;1!CL:0000814;4.27e-34;1!CL:0000815;8.34e-18;2!CL:0000792;8.34e-18;2!CL:0002677;8.34e-18;2!CL:0000898;2.45e-12;3!CL:0000791;2.42e-08;18!CL:0000789;2.42e-08;18!CL:0002419;2.42e-08;18!CL:0000624;8.25e-07;6|ontology_enrichment_celltype_v019_2=CL:0002127,2.58e-34,1;CL:0000914,2.58e-34,1;CL:0000911,2.58e-34,1;CL:0000814,2.58e-34,1;CL:0002042,2.58e-34,1;CL:0002039,2.58e-34,1;CL:0002040,2.58e-34,1;CL:0002041,2.58e-34,1;CL:0000893,6.48e-18,2;CL:0002489,6.48e-18,2;CL:0000809,6.48e-18,2;CL:0000808,6.48e-18,2;CL:0000894,6.48e-18,2;CL:0000806,6.48e-18,2;CL:0000807,6.48e-18,2;CL:0000805,6.48e-18,2;CL:0002425,6.48e-18,2;CL:0000815,7.67e-18,2;CL:0000792,7.67e-18,2;CL:0002677,7.67e-18,2;CL:0000898,2.31e-12,3;CL:0000791,2.25e-08,18;CL:0000789,2.25e-08,18;CL:0002420,2.25e-08,18;CL:0002419,2.25e-08,18;CL:0000790,2.25e-08,18;CL:0000624,8.02e-07,6|ontology_enrichment_development_v019=CL:0002425;8.34e-18;2!CL:0000790;2.42e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!4.55e-07!15;UBERON:0000179!4.55e-07!15;UBERON:0000463!4.55e-07!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.22e-09,4;UBERON:0005058,1.22e-09,4;UBERON:0009113,1.22e-09,4;UBERON:0003295,1.22e-09,4;UBERON:0005562,1.22e-09,4;UBERON:0003351,7.58e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768482119587302,0.709446689665756,0,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,1.00311897234407,0.651844533267181,0,0,0.668462741311041,1.17842362989935,0.221533894583621,1.08321545506006,0.128091319725675,1.95089021339817,0,1.10540007114339,0.579606171470105,0,0,0,0.679856056185397,0,0,0,0,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:111418209..111418214,+}}
{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C3847
|description=CAGE_peak_at_chr1:111418209..111418214,+
|id=chr1:111418209..111418214,+
|ontology_enrichment_celltype=CL:0000084!2.09e-19!25;CL:0000827!2.09e-19!25;CL:0000791!9.22e-19!18;CL:0000789!9.22e-19!18;CL:0002420!9.22e-19!18;CL:0002419!9.22e-19!18;CL:0000790!9.22e-19!18;CL:0002087!4.19e-14!119;CL:0000988!1.57e-13!182;CL:0000037!1.85e-13!172;CL:0000566!1.85e-13!172;CL:0000738!2.12e-12!140;CL:0002031!5.45e-12!124;CL:0002032!6.62e-12!165;CL:0000837!6.62e-12!165;CL:0000838!1.21e-11!52;CL:0000542!2.26e-11!53;CL:0000051!2.26e-11!53;CL:0000815!1.68e-10!2;CL:0000792!1.68e-10!2;CL:0002677!1.68e-10!2;CL:0000625!6.96e-10!11;CL:0000624!2.10e-07!6;CL:0000898!2.92e-07!3;CL:0000080!6.64e-07!6
|ontology_enrichment_celltype_v019=CL:0002127;4.27e-34;1!CL:0000911;4.27e-34;1!CL:0000814;4.27e-34;1!CL:0000815;8.34e-18;2!CL:0000792;8.34e-18;2!CL:0002677;8.34e-18;2!CL:0000898;2.45e-12;3!CL:0000791;2.42e-08;18!CL:0000789;2.42e-08;18!CL:0002419;2.42e-08;18!CL:0000624;8.25e-07;6
|ontology_enrichment_celltype_v019_2=CL:0002127,2.58e-34,1;CL:0000914,2.58e-34,1;CL:0000911,2.58e-34,1;CL:0000814,2.58e-34,1;CL:0002042,2.58e-34,1;CL:0002039,2.58e-34,1;CL:0002040,2.58e-34,1;CL:0002041,2.58e-34,1;CL:0000893,6.48e-18,2;CL:0002489,6.48e-18,2;CL:0000809,6.48e-18,2;CL:0000808,6.48e-18,2;CL:0000894,6.48e-18,2;CL:0000806,6.48e-18,2;CL:0000807,6.48e-18,2;CL:0000805,6.48e-18,2;CL:0002425,6.48e-18,2;CL:0000815,7.67e-18,2;CL:0000792,7.67e-18,2;CL:0002677,7.67e-18,2;CL:0000898,2.31e-12,3;CL:0000791,2.25e-08,18;CL:0000789,2.25e-08,18;CL:0002420,2.25e-08,18;CL:0002419,2.25e-08,18;CL:0000790,2.25e-08,18;CL:0000624,8.02e-07,6
|ontology_enrichment_development_v019=CL:0002425;8.34e-18;2!CL:0000790;2.42e-08;18
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000178!4.55e-07!15;UBERON:0000179!4.55e-07!15;UBERON:0000463!4.55e-07!15
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.22e-09,4;UBERON:0005058,1.22e-09,4;UBERON:0009113,1.22e-09,4;UBERON:0003295,1.22e-09,4;UBERON:0005562,1.22e-09,4;UBERON:0003351,7.58e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768482119587302,0.709446689665756,0,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,1.00311897234407,0.651844533267181,0,0,0.668462741311041,1.17842362989935,0.221533894583621,1.08321545506006,0.128091319725675,1.95089021339817,0,1.10540007114339,0.579606171470105,0,0,0,0.679856056185397,0,0,0,0,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr1:111418209..111418214,+
}}

Revision as of 20:06, 10 January 2014

Short description:p@chr1:111418209..111418214, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr1:111418209..111418214, +
Coexpression cluster:C3847_CD4_NK_CD14_Eosinophils_CD8_Peripheral_Natural
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data