FFCP PHASE1:Hg19::chr1:107683775..107683816,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23319 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-174bp_to_ENST00000462149_5end | |||
|coexpression_cluster_id=C3842 | |||
|description=CAGE_peak_2_at_NTNG1_5end | |||
|id=chr1:107683775..107683816,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.71e-14!180;CL:0002620!1.61e-10!23;CL:0000057!1.87e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.30e-11;23!CL:0002539;2.91e-08;10!CL:1000507;8.95e-08;10!CL:1000494;8.95e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.17e-11,23;CL:0000057,2.76e-08,76;CL:0002539,3.15e-08,10;CL:1000507,9.02e-08,10;CL:1000494,9.02e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.06e-13!365;UBERON:0000924!3.19e-10!173;UBERON:0006601!3.19e-10!173;UBERON:0002346!7.05e-10!90;UBERON:0003102!4.53e-09!95;UBERON:0004121!6.00e-09!169;UBERON:0003075!2.31e-08!86;UBERON:0007284!2.31e-08!86;UBERON:0000073!2.53e-08!94;UBERON:0001016!2.53e-08!94;UBERON:0002199!3.17e-08!45;UBERON:0002416!3.17e-08!45;UBERON:0002097!8.60e-08!40;UBERON:0001049!3.78e-07!57;UBERON:0005068!3.78e-07!57;UBERON:0006241!3.78e-07!57;UBERON:0007135!3.78e-07!57;UBERON:0005256!4.44e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;2.91e-08;10!UBERON:0004695;2.91e-08;10!UBERON:0002111;2.91e-08;10!UBERON:0004178;2.91e-08;10!UBERON:0004211;8.95e-08;10!UBERON:0009773;8.95e-08;10!UBERON:0001231;8.95e-08;10!UBERON:0004810;8.95e-08;10!UBERON:0002067;1.13e-07;9!UBERON:0003975;4.96e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.96e-09,46;UBERON:0002416,2.96e-09,46;UBERON:0004237,3.15e-08,10;UBERON:0004695,3.15e-08,10;UBERON:0002111,3.15e-08,10;UBERON:0004178,3.15e-08,10;UBERON:0002097,4.73e-08,41;UBERON:0002067,6.36e-08,9;UBERON:0004016,6.36e-08,9;UBERON:0010083,6.36e-08,9;UBERON:0004810,9.02e-08,10;UBERON:0002329,1.20e-07,71;UBERON:0003059,1.20e-07,71;UBERON:0007282,1.20e-07,71;UBERON:0004290,1.20e-07,71;UBERON:0009618,1.20e-07,71;UBERON:0003077,2.00e-07,72;UBERON:0007285,2.00e-07,72;UBERON:0007524,3.27e-07,73;UBERON:0007503,6.62e-07,78 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,2.53299878168311,0,0,0.245733936501509,0,0,0,0,0,2.6893005858071,2.41077811209591,2.19093027116212,2.43966399395253,0.861847406537515,1.83600622119828,0.313454721478088,2.0036519099174,5.33810257784248,1.25542639594803,0.382067028739756,0.164201178899891,0.472264687882075,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0.400395987036012,0,1.98313461835459,0.954053754535364,2.27685187643779,3.52342313622563,4.20500550937752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.289693037921647,0,0,2.26883561193763,2.21729397462564,1.14185221401064,0.72038491523742,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.732186172644509,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0.926864265692532,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.937285727335186,4.05808099879417,0.570471821544449,1.64393548606981,4.93224894303812,3.0755859429945,4.77532742787645,0.204154171254893,1.71968044236475,1.34323515528495,2.37600571456411,1.97813543422845,0,0,0.841680569770331,1.25118519871964,0,2.19488810440419,1.5324389789951,3.90618953157152,0,5.91985797773244,0.427114777637135,0.635795703478686,2.40072876867522,0.618315175430633,1.54584324027377,1.30281799432113,8.94514560878711,2.04617710838517,4.29137416214995,1.01254888506529,0.323292113637624,10.6502877754984,7.05264687593482,1.01736355386293,2.31913023795956,3.00020732649918,0.860413786167011,2.07355300420312,0.662648841607426,1.16193942869518,2.38420426535352,1.00928340350251,0,1.56449532329816,2.57296375277154,2.76269842704961,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,2.40194934417936,0,1.1240175325762,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,1.62302566965108,0.70445216541493,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.53735113621709,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0,0,0,0,0,1.28603687131071,0,2.93064396917709,0,0,0,0.65147236858747,0,0,5.72734816413214,3.48613383440118,17.595246448042,0,0,0,0,0,2.85273810081437,0.144781306667579,0.410952645100767,2.32779252211864,0,0,0,0,1.77866236955724,1.30139853857622,1.54657762555539,1.00509759200609,1.27587750330633,0,0,0.414415513436035,0,0,0,0.415941723061614,0.178428988797162,0,0,0.902838299183157,0,1.03473071292505,2.65690239414175,2.21243002250044,3.73599542212756,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0.744323423456331,0.153461973288062,0,0.256278298511402,1.02341449813341,0,0,4.93471020168498,1.9531789784444,4.92762936082855,1.03850885836724,5.92672930145792,0.120859449591622,0.601519410909855,0.276242966807689,0,0,0.131124414959424,2.25599806453706,4.1588282036384,0.784349769176855,2.92278449306521,4.3276167846079,0,0.680374821106063,0.863663664408557,0,0.812839312631559,3.51182841698397,5.60727800699084,4.15538004464362,11.6414872455533,0,0,0.769350375349168,0,0.650756789328606,0.309123034943167,0.183138929636687,0.247528499761764,0.574265537996172,0,0,1.93341436584244,0.462145851343933,1.68854042198743,1.7918754422989,2.57808587683857,0.870100163485371,2.38634556765083,0.534192213880424,0.495854746082934,0.576570202095319,1.78657797492418,0.910420027699949,3.253918845081,1.5740617341532,3.485186350803,0,1.06461206063404,4.34966496037536,2.40921484835096,0,0,0,0,0.767693373934002,0,1.27281299170375,0,0.179872457583315,0,0.353437207037059,2.02182481573316,0,2.94880919367287,0,0,0,0.272999822815972,0,1.13008116620243,3.30819206127675,0.66343897524122,0,0,1.9676842561399,0,0,0,0,0,0,2.12856638442359,0,0.658589785919804,0.379473173765715,0,0.0962221127255121,1.34060455107157,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,18.1600920916704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,1.45632626099416,0,0,0,0,0,1.9882952955326,0.281338832821026,5.45412654612239,0,46.0253389719026,0,0.552567831062295,0,0,0,0.311039587661807,1.52776196950456,2.14825409610731,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,1.16641845353302,6.07687482266523,0,0.241192877250816,0,0.442317039724898,0.591095237907095,0.87754158861589,0,0,1.23120413606075,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,0,0.208843899010911,0.876214728748802,0,1.87411556580271,0,0,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,1.70765727617876,0.138674673013139,0.520679215005393,0,2.43765778425127,0.17472666824203,0,0,0,0,0,0,1.12990370390266,0.685209623233754,0.596143835108969,0.949661939338181,0,10.8214407339571,0.213452994739353,0,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0.13690537889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| |||
|short_description=p2@NTNG1 | |||
}} |
Revision as of 19:52, 10 January 2014
Short description: | p2@NTNG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NTNG1_5end |
Coexpression cluster: | C3842_anaplastic_neuroectodermal_mesenchymal_neuroblastoma_Mesothelial_Fibroblast_gall |
Association with transcript: | -174bp_to_ENST00000462149_5end |
EntrezGene: | NTNG1 |
HGNC: | 23319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.17e-11 | 23 |
fibroblast | 2.76e-08 | 76 |
aortic smooth muscle cell | 3.15e-08 | 10 |
kidney tubule cell | 9.02e-08 | 10 |
nephron tubule epithelial cell | 9.02e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
integument | 2.96e-09 | 46 |
integumental system | 2.96e-09 | 46 |
blood vessel smooth muscle | 3.15e-08 | 10 |
arterial system smooth muscle | 3.15e-08 | 10 |
artery smooth muscle tissue | 3.15e-08 | 10 |
aorta smooth muscle tissue | 3.15e-08 | 10 |
skin of body | 4.73e-08 | 41 |
dermis | 6.36e-08 | 9 |
dermatome | 6.36e-08 | 9 |
future dermis | 6.36e-08 | 9 |
nephron tubule epithelium | 9.02e-08 | 10 |
somite | 1.20e-07 | 71 |
presomitic mesoderm | 1.20e-07 | 71 |
presumptive segmental plate | 1.20e-07 | 71 |
dermomyotome | 1.20e-07 | 71 |
trunk paraxial mesoderm | 1.20e-07 | 71 |
paraxial mesoderm | 2.00e-07 | 72 |
presumptive paraxial mesoderm | 2.00e-07 | 72 |
dense mesenchyme tissue | 3.27e-07 | 73 |
epithelial vesicle | 6.62e-07 | 78 |