FFCP PHASE1:Hg19::chr1:86889531..86889552,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2016 | |||
|TSSclassifier=not | |||
|UniProt=Q9UQC9,E7EUD9 | |||
|association_with_transcript=-216bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_4_at_CLCA2_5end | |||
|id=chr1:86889531..86889552,+ | |||
|ontology_enrichment_celltype=CL:0000136!6.20e-20!15;CL:0002615!1.21e-10!3;CL:0000135!3.11e-10!3;CL:0000386!3.11e-10!3;CL:0000388!3.11e-10!3;CL:0000197!2.23e-08!6;CL:0000098!2.23e-08!6;CL:0002167!2.23e-08!6;CL:0002617!1.16e-07!2;CL:1000306!1.29e-07!4;CL:0002547!1.29e-07!4;CL:0000325!1.29e-07!39;CL:0000569!2.69e-07!4;CL:0000011!2.69e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.39e-46;13!CL:0002615;5.78e-24;3!CL:0002617;2.19e-16;2!CL:0002540;2.02e-12;6!CL:0000135;2.71e-11;3!CL:0000388;2.71e-11;3!CL:0002092;1.21e-07;10!CL:0002552;6.37e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.44e-40,15;CL:0002615,7.91e-24,3;CL:0002617,1.60e-16,2;CL:0002540,2.23e-12,6;CL:0000135,2.64e-11,3;CL:0000388,2.64e-11,3;CL:0002092,1.28e-07,10;CL:0002552,6.37e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.60e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!3.11e-10!3;UBERON:0000415!1.29e-07!4;UBERON:0007240!1.29e-07!4;UBERON:0005742!1.29e-07!4;UBERON:0005734!1.29e-07!4;UBERON:0004664!1.29e-07!4;UBERON:0004663!1.29e-07!4;UBERON:0000341!9.73e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.60e-14;9!UBERON:0000042;4.60e-14;9!UBERON:0003688;2.80e-12;6!UBERON:0002358;2.80e-12;6!UBERON:0003684;2.80e-12;6!UBERON:0001178;2.80e-12;6!UBERON:0007846;2.71e-11;3!UBERON:0000043;2.71e-11;3!UBERON:0007845;2.71e-11;3!UBERON:0000310;1.31e-07;10!UBERON:0001443;5.88e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.27e-12,6;UBERON:0002358,3.27e-12,6;UBERON:0003684,3.27e-12,6;UBERON:0001178,3.27e-12,6;UBERON:0007846,2.64e-11,3;UBERON:0000043,2.64e-11,3;UBERON:0007845,2.64e-11,3;UBERON:0004457,1.49e-10,12;UBERON:0000042,1.49e-10,12;UBERON:0000310,1.20e-07,10;UBERON:0001443,5.42e-07,11 | |||
|phase1_expression=1.63510541343501,4.28201047781966,5.49722175974288,1.0007329835313,4.46961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,2.58152958673932,0.709336764396714,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0,1.23990937410919,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,7.43571861366535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.535286966391485,0.157702415033935,1.99140405487612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53329162357197,0.658589785919804,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,107.575799995321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,1.5041393641362,3.06345576763462,5.24596209135687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13641803165053,6.79233334731953,17.7962244319307,0.228840068396924,2.11723293268535,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,1.53498834705095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,5.0839319149456,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CLCA2 | |||
}} |
Revision as of 19:23, 10 January 2014
Short description: | p4@CLCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLCA2_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -216bp_to_ENST00000370565, ENST00000439777, NM_006536, uc001dlr.3_5end |
EntrezGene: | CLCA2 |
HGNC: | 2016 |
UniProt: | Q9UQC9E7EUD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.44e-40 | 15 |
adipocyte of omentum tissue | 7.91e-24 | 3 |
adipocyte of breast | 1.60e-16 | 2 |
mesenchymal stem cell of the bone marrow | 2.23e-12 | 6 |
fibrocyte | 2.64e-11 | 3 |
tendon cell | 2.64e-11 | 3 |
bone marrow cell | 1.28e-07 | 10 |
fibroblast of gingiva | 6.37e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.27e-12 | 6 |
peritoneum | 3.27e-12 | 6 |
abdominal cavity | 3.27e-12 | 6 |
visceral peritoneum | 3.27e-12 | 6 |
dense regular connective tissue | 2.64e-11 | 3 |
tendon | 2.64e-11 | 3 |
regular connective tissue | 2.64e-11 | 3 |
cavity lining | 1.49e-10 | 12 |
serous membrane | 1.49e-10 | 12 |
breast | 1.20e-07 | 10 |
chest | 5.42e-07 | 11 |