FFCP PHASE1:Hg19::chr1:53308398..53308413,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440590 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32058 | |||
|TSSclassifier=strong | |||
|UniProt=Q6WRX3 | |||
|association_with_transcript=0bp_to_ENST00000371528_5end | |||
|coexpression_cluster_id=C2592 | |||
|description=CAGE_peak_5_at_ZYG11A_5end | |||
|id=chr1:53308398..53308413,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.73e-08!7;CL:0000586!1.73e-08!7;CL:0000066!6.28e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.86e-16;7!CL:0000586;5.86e-16;7!CL:0002322;2.32e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.88e-16,7;CL:0000586,5.88e-16,7;CL:0002322,1.84e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.01e-17;10!UBERON:0005564;9.01e-17;10 | |||
|ontology_enrichment_disease=DOID:0050687!2.45e-20!143;DOID:162!7.25e-19!235;DOID:14566!1.77e-18!239;DOID:305!6.06e-17!106;DOID:3095!1.29e-08!22;DOID:2994!1.29e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.18e-13;8!DOID:3095;1.46e-10;22!DOID:2994;1.46e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.22e-13,8;DOID:3095,1.32e-10,22;DOID:2994,1.32e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.14e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.24e-21;8!UBERON:0003135;3.14e-15;11!UBERON:0000991;7.33e-08;21!UBERON:0003101;1.72e-07;22!UBERON:0000079;1.72e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.30e-21,8;UBERON:0003135,3.98e-15,11;UBERON:0000991,8.25e-08,21;UBERON:0009196,8.25e-08,21;UBERON:0009117,8.25e-08,21;UBERON:0005564,8.25e-08,21;UBERON:0004176,1.92e-07,22;UBERON:0003101,1.92e-07,22;UBERON:0000079,1.92e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.502170558379211,0.916960868975415,1.14940825229924,1.57421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0.30648779579902,0,0,0,0,0,0.600182192168805,0.309157587715317,0.257640540045629,0,0.337552664482532,0,0,0,0.161646056818812,0,0.10075209822764,0,0.57978255948989,0.272746120590835,0,2.6834215348511,0.662648841607426,1.85910308591229,2.17688215532278,0,1.09493207722749,0,0,1.38134921352481,0,0,0.946454400318751,0.842923450390509,1.68707720918437,0.330881918197182,0.653638332277218,0.237270619111097,0.943819157121151,0.196221465125346,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0.256450125116389,0,0,0,0.54941678891006,0.41254749960294,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,1.22520107990516,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0.333698283423817,0,0,0,0.540911356951966,0,0,0,0,1.57768678274367,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0.61221999997337,0,0,0,0.236387681767936,0.689486746482929,0,0.694499979733169,0,0,0,0,0,0,0.544692317594951,0,0,0,0.23056390438806,0.718061155278177,0.217294743844016,0,0.0915975934018623,0,0,0.31396051279005,0.332423363800313,4.06072189110925,2.35275041181287,3.18861015254101,2.84630599086278,0,0.210998064528027,0.652931232636591,0.282706142867882,0,0,0,0,0.296521128680622,0,0.522109747527277,0,0,0,0.182454789215666,0,0,0,0,0,0,0.751617097072463,0.414752765588989,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0.609414446062818,0,0.51595809741485,0.483781656445426,0.365446585430928,0.821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0,0.432271251462318,0.229073192331831,0.171594997861965,0,0.248505071130865,0,0,0.523014231561666,0,0,0,0,0,0.859530882839914,0.788662062837943,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0.643012593860077,0.825236619583403,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0.191915197319445,0,0,0.5085370753095,0,0,0,2.39460383124975,0.574647645245373,0,0.226624183040251,0.293104467356165,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,1.7785046870815,1.21792598380896,0,0,0,0,0.327872630709804,0.471162288750703,0,0,0,0,0,0,2.90532133366085,0,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.385239660814607,0,0,0.226705925512272,0,0.734210113519403,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0.982829546539238,0,0,0,0.426766918776564,0,0.567515953566836,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0.596748666348824,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0.472775363535873,0.111231401892069,0.078493092850514,0,0,0,0,0.47775168788705,0.0714765441766563,0,1.16241425368125,0,1.60342272946051,0.207216164163037,0,0,0,0.236664001461131,0,0,1.14553434272025,0,0.955538938977433,0.223710863595585,0,0,0,0,0,0,0,0,0.475680363110274,0.5647304101948,2.52863188514487,0.150962843566674,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0.699588091474503,0.357107877211315,0,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0.756998549010474,4.58915402247521,0.380095503034311,9.79092765523025,7.48208734743569,7.90296135999666,4.26202816797038,0.833565680400634,1.07185652062471,0,0,0,0.23806443146374,0,0.248298857183432,0.112131862580613,0.445530107947154,0.808468755832877,0.217716747896961,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p5@ZYG11A | |||
}} |
Revision as of 18:33, 10 January 2014
Short description: | p5@ZYG11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ZYG11A_5end |
Coexpression cluster: | C2592_testicular_teratocarcinoma_maxillary_chronic_transitionalcell_cervical_Saos2 |
Association with transcript: | 0bp_to_ENST00000371528_5end |
EntrezGene: | ZYG11A |
HGNC: | 32058 |
UniProt: | Q6WRX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.88e-16 | 7 |
germ cell | 5.88e-16 | 7 |
embryonic stem cell | 1.84e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 7.30e-21 | 8 |
male reproductive organ | 3.98e-15 | 11 |
gonad | 8.25e-08 | 21 |
indifferent external genitalia | 8.25e-08 | 21 |
indifferent gonad | 8.25e-08 | 21 |
gonad primordium | 8.25e-08 | 21 |
external genitalia | 1.92e-07 | 22 |
male organism | 1.92e-07 | 22 |
male reproductive system | 1.92e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.22e-13 | 8 |
germ cell and embryonal cancer | 1.32e-10 | 22 |
germ cell cancer | 1.32e-10 | 22 |