FFCP PHASE1:Hg19::chr1:22965767..22965778,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_at_chr1:22965767..22965778,+ | |||
|id=chr1:22965767..22965778,+ | |||
|ontology_enrichment_celltype=CL:0000235!6.17e-13!10;CL:0002619!4.13e-12!3;CL:0002009!3.72e-10!65;CL:0000840!1.55e-09!5;CL:0001029!1.55e-09!5;CL:0002194!3.29e-09!63;CL:0000576!3.29e-09!63;CL:0000040!3.29e-09!63;CL:0000559!3.29e-09!63;CL:0000557!5.40e-09!71;CL:0000766!3.88e-08!76;CL:0000839!5.83e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000235;5.18e-75;6!CL:0002619;1.04e-54;3!CL:0000473;7.30e-10;39!CL:0000234;7.30e-10;39!CL:0000766;8.59e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.45e-75,6;CL:0002619,1.25e-54,3;CL:0002194,7.97e-24,59;CL:0000576,7.97e-24,59;CL:0000040,7.97e-24,59;CL:0000559,7.97e-24,59;CL:0002009,4.83e-23,61;CL:0000839,2.74e-21,66;CL:0000557,5.72e-21,67;CL:0000766,1.68e-19,72;CL:0000763,6.96e-13,108;CL:0000049,6.96e-13,108;CL:0002087,4.53e-12,115;CL:0002031,1.51e-11,120;CL:0000738,4.00e-10,136;CL:0000473,1.51e-09,48;CL:0000234,1.51e-09,48;CL:0002032,1.85e-08,161;CL:0000837,1.85e-08,161;CL:0000037,4.44e-08,168;CL:0000988,1.23e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.86e-27!115;UBERON:0000062!1.84e-08!511;UBERON:0002791!1.05e-07!33;UBERON:0002371!1.38e-07!80;UBERON:0002020!1.96e-07!34;UBERON:0003528!1.96e-07!34;UBERON:0001893!1.96e-07!34;UBERON:0002780!3.07e-07!41;UBERON:0001890!3.07e-07!41;UBERON:0006240!3.07e-07!41;UBERON:0003080!5.06e-07!42;UBERON:0002390!7.27e-07!102;UBERON:0003061!7.27e-07!102;UBERON:0001474!8.14e-07!86;UBERON:0001049!8.85e-07!57;UBERON:0005068!8.85e-07!57;UBERON:0006241!8.85e-07!57;UBERON:0007135!8.85e-07!57;UBERON:0002193!8.95e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.71e-19;1!UBERON:0006518;2.71e-19;1!UBERON:0008949;2.71e-19;1!UBERON:0000101;2.71e-19;1!UBERON:0002167;2.71e-19;1!UBERON:0002114;3.25e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.71e-19,1;UBERON:0006518,2.71e-19,1;UBERON:0008949,2.71e-19,1;UBERON:0000101,2.71e-19,1;UBERON:0002167,2.71e-19,1;UBERON:0002371,1.84e-18,76;UBERON:0001474,4.31e-17,82;UBERON:0004765,1.53e-15,90;UBERON:0002405,4.97e-15,93;UBERON:0002390,3.05e-14,98;UBERON:0003061,3.05e-14,98;UBERON:0001434,5.98e-14,100;UBERON:0002193,6.96e-13,108;UBERON:0002204,3.93e-08,167;UBERON:0002114,3.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,4.70222495903841,5.83008598834163,2.31818010870768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.649094787309367,0.174129737299267,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,0.234004265139238,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,2.51128545716063,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,2.48543433208317,0.992332043623902,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0.297046400327086,0,0,0.469919589899268,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0.310298987585686,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:22965767..22965778,+ | |||
}} |
Revision as of 16:57, 10 January 2014
Short description: | p@chr1:22965767..22965778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22965767..22965778, + |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.45e-75 | 6 |
adult endothelial progenitor cell | 1.25e-54 | 3 |
monopoietic cell | 7.97e-24 | 59 |
monocyte | 7.97e-24 | 59 |
monoblast | 7.97e-24 | 59 |
promonocyte | 7.97e-24 | 59 |
macrophage dendritic cell progenitor | 4.83e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.74e-21 | 66 |
granulocyte monocyte progenitor cell | 5.72e-21 | 67 |
myeloid leukocyte | 1.68e-19 | 72 |
myeloid cell | 6.96e-13 | 108 |
common myeloid progenitor | 6.96e-13 | 108 |
nongranular leukocyte | 4.53e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.51e-11 | 120 |
leukocyte | 4.00e-10 | 136 |
defensive cell | 1.51e-09 | 48 |
phagocyte | 1.51e-09 | 48 |
hematopoietic oligopotent progenitor cell | 1.85e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-08 | 161 |
hematopoietic stem cell | 4.44e-08 | 168 |
hematopoietic cell | 1.23e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.71e-19 | 1 |
right lung lobe | 2.71e-19 | 1 |
lower lobe of lung | 2.71e-19 | 1 |
lobe of lung | 2.71e-19 | 1 |
right lung | 2.71e-19 | 1 |
bone marrow | 1.84e-18 | 76 |
bone element | 4.31e-17 | 82 |
skeletal element | 1.53e-15 | 90 |
immune system | 4.97e-15 | 93 |
hematopoietic system | 3.05e-14 | 98 |
blood island | 3.05e-14 | 98 |
skeletal system | 5.98e-14 | 100 |
hemolymphoid system | 6.96e-13 | 108 |
musculoskeletal system | 3.93e-08 | 167 |
duodenum | 3.35e-07 | 2 |