FFCP PHASE1:Hg19::chr1:19991353..19991397,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5301 | |||
|TSSclassifier=weak | |||
|UniProt=P50406 | |||
|association_with_transcript=-382bp_to_ENST00000289753,NM_000871,uc001bcl.2_5end | |||
|description=CAGE_peak_1_at_HTR6_5end | |||
|id=chr1:19991353..19991397,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.77e-07!18;CL:0000789!4.77e-07!18;CL:0002420!4.77e-07!18;CL:0002419!4.77e-07!18;CL:0000790!4.77e-07!18;CL:0000624!8.08e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.51e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.64e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.09e-28!41;UBERON:0001890!1.09e-28!41;UBERON:0006240!1.09e-28!41;UBERON:0001017!3.24e-28!82;UBERON:0001893!3.87e-28!34;UBERON:0002020!5.36e-28!34;UBERON:0003528!5.36e-28!34;UBERON:0003080!1.10e-27!42;UBERON:0001049!1.53e-27!57;UBERON:0005068!1.53e-27!57;UBERON:0006241!1.53e-27!57;UBERON:0007135!1.53e-27!57;UBERON:0000073!2.83e-27!94;UBERON:0001016!2.83e-27!94;UBERON:0001869!2.96e-27!32;UBERON:0002791!4.90e-27!33;UBERON:0005743!6.51e-27!86;UBERON:0000955!8.72e-26!69;UBERON:0006238!8.72e-26!69;UBERON:0002616!3.42e-23!59;UBERON:0002619!4.38e-23!22;UBERON:0001950!3.40e-21!20;UBERON:0000956!2.20e-19!25;UBERON:0000203!2.20e-19!25;UBERON:0003075!2.81e-19!86;UBERON:0007284!2.81e-19!86;UBERON:0002346!1.42e-18!90;UBERON:0003056!4.04e-18!61;UBERON:0007023!5.21e-15!115;UBERON:0002420!9.03e-11!9;UBERON:0007245!9.03e-11!9;UBERON:0010009!9.03e-11!9;UBERON:0010011!9.03e-11!9;UBERON:0000454!9.03e-11!9;UBERON:0000033!1.39e-10!123;UBERON:0004121!1.76e-10!169;UBERON:0000924!2.56e-10!173;UBERON:0006601!2.56e-10!173;UBERON:0002308!3.58e-10!9;UBERON:0000125!3.58e-10!9;UBERON:0000153!4.59e-10!129;UBERON:0007811!4.59e-10!129;UBERON:0009663!7.97e-09!7;UBERON:0000200!3.23e-08!6;UBERON:0001871!1.67e-07!7;UBERON:0001872!6.79e-07!5;UBERON:0002021!8.68e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.29e-50;32!UBERON:0002791;1.14e-46;32!UBERON:0002619;6.18e-46;22!UBERON:0001893;2.79e-45;34!UBERON:0003528;6.52e-45;34!UBERON:0002020;6.52e-45;34!UBERON:0001950;4.53e-42;20!UBERON:0000956;7.41e-40;25!UBERON:0000203;7.41e-40;25!UBERON:0002780;6.28e-38;41!UBERON:0001890;6.28e-38;41!UBERON:0000073;2.92e-24;53!UBERON:0002616;2.92e-24;53!UBERON:0000955;7.60e-20;68!UBERON:0001017;2.19e-18;75!UBERON:0002420;3.50e-17;9!UBERON:0007245;3.50e-17;9!UBERON:0010009;3.50e-17;9!UBERON:0010011;3.50e-17;9!UBERON:0000454;3.50e-17;9!UBERON:0001016;9.26e-16;83!UBERON:0000200;3.82e-15;6!UBERON:0009663;2.05e-13;7!UBERON:0000125;2.42e-13;9!UBERON:0002308;2.42e-13;9!UBERON:0001872;1.79e-12;5!UBERON:0002021;3.24e-12;5!UBERON:0001871;6.92e-12;6!UBERON:0000349;1.23e-11;5!UBERON:0000369;2.04e-11;4!UBERON:0002435;2.04e-11;4!UBERON:0000204;2.04e-11;4!UBERON:0005383;5.33e-09;3!UBERON:0005382;5.33e-09;3!UBERON:0001870;2.56e-08;3!UBERON:0011216;2.36e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.17e-56,32;UBERON:0001893,1.21e-52,34;UBERON:0002780,2.23e-52,41;UBERON:0001890,2.23e-52,41;UBERON:0003080,2.23e-52,41;UBERON:0006240,2.23e-52,41;UBERON:0002791,3.37e-52,32;UBERON:0003528,4.35e-52,34;UBERON:0002020,4.35e-52,34;UBERON:0002619,3.51e-46,22;UBERON:0000073,1.42e-43,53;UBERON:0002616,1.42e-43,53;UBERON:0001049,3.17e-43,56;UBERON:0005068,3.17e-43,56;UBERON:0006241,3.17e-43,56;UBERON:0007135,3.17e-43,56;UBERON:0001950,2.68e-42,20;UBERON:0000955,3.65e-40,68;UBERON:0006238,3.65e-40,68;UBERON:0000956,4.52e-40,25;UBERON:0000203,4.52e-40,25;UBERON:0001016,3.65e-39,89;UBERON:0001017,5.90e-38,81;UBERON:0003056,1.74e-34,61;UBERON:0003075,4.01e-28,82;UBERON:0007284,4.01e-28,82;UBERON:0002346,2.40e-26,86;UBERON:0010371,2.06e-21,104;UBERON:0007023,8.55e-18,114;UBERON:0002420,2.14e-17,9;UBERON:0007245,2.14e-17,9;UBERON:0010009,2.14e-17,9;UBERON:0010011,2.14e-17,9;UBERON:0000454,2.14e-17,9;UBERON:0004121,8.66e-17,171;UBERON:0000924,8.66e-17,171;UBERON:0006601,8.66e-17,171;UBERON:0000200,3.95e-15,6;UBERON:0010314,8.40e-15,132;UBERON:0011216,6.34e-14,223;UBERON:0009663,1.93e-13,7;UBERON:0000125,3.04e-13,9;UBERON:0002308,3.04e-13,9;UBERON:0001872,1.92e-12,5;UBERON:0002021,3.15e-12,5;UBERON:0001871,4.26e-12,6;UBERON:0000349,7.46e-12,5;UBERON:0000369,2.05e-11,4;UBERON:0002435,2.05e-11,4;UBERON:0000204,2.05e-11,4;UBERON:0010082,2.05e-11,4;UBERON:0005383,5.36e-09,3;UBERON:0005382,5.36e-09,3;UBERON:0001870,2.51e-08,3;UBERON:0000025,6.57e-08,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0.587200878669695,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16380747125216,2.35806457649499,1.85041349099558,0,1.30368906653436,3.31413464014313,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,8.30404753707538,4.54819407752512,1.04535523804977,0.226618685395132,2.29932296161153,1.37450978193052,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0,0.821127996921047,1.20964045934839,1.06976078313403,0.144824403882799,0,0,0.12786256184353,0,1.50401373190767,0,0,0.486634870302636,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.731842236777572,0.397589304964456,1.2781333715647,0.518305275076852,1.00928340350251,1.45990943630332,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.431255149719035,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0.206768026122887,0.215714200818617,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,6.51626833877586,0.962479855263359,0,0,0,0,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.970884173996107,0,0,0,0,0,1.9882952955326,2.53204949538923,0,1.97764649072111,1.05562704063997,0,1.38141957765574,0.755798243562828,0,2.46169610922139,0,0,0,0,0,0,0,2.90799823828566,2.69027484669369,1.99613798001194,0,0.174919999992391,0,0.1137934482855,0,0.945550727071745,2.41320361269025,0.583209226766509,4.5142498682656,38.9726209758089,32.0786526743585,0,0,0,2.4132393686937,0.10893846351899,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.247127877893006,0.730953646538188,0.202203398942031,0,12.1817511777176,0,0.19566461893209,2.67058417487502,0,0,1.53036380815245,0.063186579628488,0,0.311064574191741,0.664653872707185,0.661983911750998,1.88359751044335,2.38944859545918,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,4.62168810477915,0.195551382734803,0,0,0.19980960958213,0,1.37443915399099,0,0,0,0,0.271808412147228,0.104602846312333,0,0,14.4100869290349,2.60120219894787,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0,0,48.6871659378261,1.59045937961861,2.17925449778521,0.482259445395058,1.10031549277787,0.83088067605837,0.2249738915515,0,8.07969103551728,0,0,3.51445740504487,0,0.179287339332845,0,0,0,76.2805612964249,0,0,0,0,0,0,0.339936274560377,0,0,1.0342636508924,0.39669780522807,0.171086837884329,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,5.31640907980192,5.61320818549031,4.50687350543399,0,0.332787154610557,1.42821726765182,0.691743174681154,0,0,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0.192914038270915,0,0,0,0,5.25382057376577,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,2.94157053998399,1.61737217095023,0,0.109209638192014,0,0,0.371807292777007,7.26238393365217,0,0,0,0,0,18.2410999273945,7.08482881627925,2.07524016774297,3.07674546361133,1.76450187355203,6.15499546931539,3.06803726700517,0,0,0.11796972334774,0,0,0,0.690359926060101,0.198916222116275,0,0.20170506870352,0,0,0,0,5.53808193870836,3.90539049306924,4.54710952302605,4.24885928299176,2.18789923607288,0,0,0,0,0,0,1.21393120847326,0,0,1.49804183822513,0,0.747667062745149,5.72223129996787,0,0.222462803784138,0,28.1236905949643,0,0,1.29556554731173,0,0.0714765441766563,1.58013611732727,16.73876525301,1.91244099532837,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,7.16222790580926,1.66488127088596,0,6.70637152147118,0.150962843566674,0,0,0,0,0,0.785233868459781,0.297046400327086,1.2679671827502,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0,6.52718305832781,0.436350690340377,0,0,0.462175628631418,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0.829169439458779,4.3441858261996,0,0,0,0,0,0,0,0,0,1.34704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,1.22068853494722,0,0.201273793591026,0.641136984606466 | |||
|short_description=p1@HTR6 | |||
}} |
Revision as of 16:45, 10 January 2014
Short description: | p1@HTR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HTR6_5end |
Coexpression cluster: | NA |
Association with transcript: | -382bp_to_ENST00000289753, NM_000871, uc001bcl.2_5end |
EntrezGene: | HTR6 |
HGNC: | 5301 |
UniProt: | P50406 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.64e-09 | 6 |